Conservation of cofitness between GFF3138 and GFF81 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3138 Two-component system response regulator QseB 1.0 GFF81 Ferric hydroxamate outer membrane receptor FhuA 0.50 5
Escherichia fergusonii Becca 0.90 EFB2_00788 Transcriptional regulatory protein QseB 0.74 EFB2_03894 Ferrichrome outer membrane transporter/phage receptor low > 86
Escherichia coli ECOR38 0.90 HEPCGN_17740 Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.74 HEPCGN_08270 fhuA ferrichrome porin FhuA low > 87
Escherichia coli BL21 0.90 ECD_02897 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.74 ECD_00149 ferrichrome outer membrane transporter low > 61
Escherichia coli Nissle 1917 0.90 ECOLIN_RS17425 quorum sensing response regulator transcription factor QseB 0.74 ECOLIN_RS00840 ferrichrome porin FhuA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_00677 Transcriptional regulatory protein QseB 0.96 OHPLBJKB_03512 Ferrichrome outer membrane transporter/phage receptor low > 73
Escherichia coli ECRC102 0.89 NIAGMN_16645 Transcriptional regulatory protein QseB 0.74 NIAGMN_08170 fhuA ferrichrome porin FhuA — —
Escherichia coli ECOR27 0.89 NOLOHH_10660 Transcriptional regulatory protein QseB 0.73 NOLOHH_02665 fhuA ferrichrome porin FhuA low > 75
Escherichia coli ECRC62 0.89 BNILDI_00855 Transcriptional regulatory protein QseB 0.73 BNILDI_09005 fhuA ferrichrome porin FhuA low > 75
Escherichia coli ECRC100 0.89 OKFHMN_18880 Transcriptional regulatory protein QseB 0.75 OKFHMN_10320 fhuA ferrichrome porin FhuA low > 80
Escherichia coli ECRC98 0.89 JDDGAC_22515 Transcriptional regulatory protein QseB 0.75 JDDGAC_13915 fhuA ferrichrome porin FhuA low > 86
Escherichia coli ECRC99 0.89 KEDOAH_09265 Transcriptional regulatory protein QseB 0.75 KEDOAH_17835 fhuA ferrichrome porin FhuA — —
Escherichia coli ECRC101 0.89 MCAODC_09395 Transcriptional regulatory protein QseB 0.75 MCAODC_00835 fhuA ferrichrome porin FhuA low > 87
Escherichia coli BW25113 0.89 b3025 qseB DNA-binding response regulator in two-component regulatory system with QseC (NCBI) 0.73 b0150 fhuA ferrichrome outer membrane transporter (NCBI) low > 76
Enterobacter asburiae PDN3 0.87 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.73 EX28DRAFT_3739 TonB-dependent siderophore receptor low > 76
Klebsiella michiganensis M5al 0.86 BWI76_RS24335 two-component system response regulator QseB 0.63 BWI76_RS05125 ferrichrome porin FhuA low > 92
Enterobacter sp. TBS_079 0.86 MPMX20_03863 Transcriptional regulatory protein QseB 0.60 MPMX20_00836 Ferrichrome outer membrane transporter/phage receptor low > 85
Rahnella sp. WP5 0.71 EX31_RS03275 response regulator 0.61 EX31_RS03225 ferrichrome porin FhuA low > 89
Pantoea sp. MT58 0.71 IAI47_00340 response regulator 0.58 IAI47_15610 ferrichrome porin FhuA low > 76
Dickeya dianthicola 67-19 0.69 HGI48_RS21345 response regulator 0.33 HGI48_RS14640 TonB-dependent siderophore receptor low > 71
Serratia liquefaciens MT49 0.68 IAI46_21235 response regulator 0.59 IAI46_21185 ferrichrome porin FhuA low > 86
Dickeya dianthicola ME23 0.68 DZA65_RS22325 response regulator 0.33 DZA65_RS15585 TonB-dependent siderophore receptor low > 75
Paraburkholderia graminis OAS925 0.53 ABIE53_003418 two-component system response regulator QseB 0.32 ABIE53_001694 iron complex outermembrane receptor protein low > 113
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS16220 transcriptional regulator 0.27 BPHYT_RS20275 TonB-denpendent receptor — —
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_04180 two component transcriptional regulator, winged helix family 0.31 H281DRAFT_04924 iron complex outermembrane recepter protein low > 103
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS02475 response regulator 0.34 QEN71_RS30735 TonB-dependent siderophore receptor low > 153
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS21985 transcriptional regulator 0.25 HSERO_RS11745 TonB-dependent receptor low > 78
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_3169 Two-component system response regulator QseB 0.32 PfGW456L13_1133 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent low > 87
Dechlorosoma suillum PS 0.50 Dsui_3448 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.28 Dsui_2950 TonB-dependent siderophore receptor low > 51
Pseudomonas simiae WCS417 0.50 PS417_13595 XRE family transcriptional regulator 0.33 PS417_11955 ligand-gated channel low > 88
Pseudomonas fluorescens SBW25 0.49 PFLU_RS15245 response regulator 0.33 PFLU_RS12695 TonB-dependent siderophore receptor low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS15245 response regulator 0.33 PFLU_RS12695 TonB-dependent siderophore receptor low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3523 Two-component system response regulator QseB 0.15 GFF5752 Ferrichrome-iron receptor low > 90
Variovorax sp. OAS795 0.48 ABID97_RS14955 response regulator 0.32 ABID97_RS21465 TonB-dependent siderophore receptor low > 91
Variovorax sp. SCN45 0.48 GFF1175 Two-component system response regulator QseB 0.31 GFF1522 Ferrichrome-iron receptor low > 127
Ralstonia solanacearum GMI1000 0.47 RS_RS24590 DNA-binding response regulator 0.30 RS_RS14625 TonB-dependent siderophore receptor low > 80
Ralstonia solanacearum PSI07 0.47 RPSI07_RS07290 DNA-binding response regulator 0.29 RPSI07_RS10550 TonB-dependent siderophore receptor low > 81
Acidovorax sp. GW101-3H11 0.47 Ac3H11_3946 Two-component system response regulator QseB 0.26 Ac3H11_250 Ferrichrome-iron receptor low > 79
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS16415 DNA-binding response regulator 0.30 RALBFv3_RS06675 TonB-dependent siderophore receptor low > 76
Ralstonia solanacearum UW163 0.46 UW163_RS17155 DNA-binding response regulator 0.30 UW163_RS06950 TonB-dependent siderophore receptor — —
Acinetobacter radioresistens SK82 0.43 MPMX26_02034 Transcriptional regulatory protein QseB 0.13 MPMX26_01925 Metal-pseudopaline receptor CntO — —
Sinorhizobium meliloti 1021 0.43 SMc00458 transcriptional regulator 0.28 SMc01611 ferrichrome receptor precursor protein low > 103
Marinobacter adhaerens HP15 0.42 HP15_3968 two component transcriptional regulator, winged helix family 0.26 HP15_3673 ferrichrome outer membrane transporter low > 73
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS14145 response regulator transcription factor 0.31 LRK54_RS02745 TonB-dependent siderophore receptor low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS13865 response regulator transcription factor 0.31 LRK55_RS02500 TonB-dependent siderophore receptor low > 63
Azospirillum brasilense Sp245 0.41 AZOBR_RS18790 transcriptional regulator 0.33 AZOBR_RS26605 TonB-denpendent receptor low > 97
Rhizobium sp. OAE497 0.41 ABIE40_RS17030 response regulator 0.30 ABIE40_RS21735 TonB-dependent siderophore receptor low > 107
Lysobacter sp. OAE881 0.40 ABIE51_RS00875 response regulator transcription factor 0.30 ABIE51_RS00595 TonB-dependent siderophore receptor low > 62
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.4942.1 Two-component system regulatory protein 0.15 Xcc-8004.5299.1 Ferrichrome-iron receptor low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS15210 DNA-binding response regulator 0.10 CA265_RS18590 TonB-dependent siderophore receptor low > 88

Not shown: 19 genomes with orthologs for GFF3138 only; 10 genomes with orthologs for GFF81 only