Conservation of cofitness between PS417_21420 and PS417_00305 in Pseudomonas simiae WCS417

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_21420 aminodeoxychorismate lyase 1.0 PS417_00305 cytochrome oxidase subunit I 0.36 18
Pseudomonas fluorescens SBW25 0.91 PFLU_RS23035 endolytic transglycosylase MltG 1.00 PFLU_RS00295 cytochrome c oxidase subunit I low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS23035 endolytic transglycosylase MltG 1.00 PFLU_RS00295 cytochrome c oxidase subunit I low > 109
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_01345 aminodeoxychorismate lyase 0.96 AO353_10835 cytochrome oxidase subunit I low > 101
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_5956 FIG004453: protein YceG like 0.97 Pf6N2E2_4099 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 103
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_2109 FIG004453: protein YceG like 0.97 PfGW456L13_614 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 87
Pseudomonas sp. RS175 0.73 PFR28_03006 Endolytic murein transglycosylase 0.97 PFR28_04690 Cytochrome c oxidase subunit 1 low > 88
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_447 FIG004453: protein YceG like 0.97 Pf1N1B4_1854 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 87
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_20185 aminodeoxychorismate lyase 0.97 AO356_11165 cytochrome oxidase subunit I low > 104
Pseudomonas putida KT2440 0.69 PP_1918 septation protein 0.94 PP_0104 Cytochrome c oxidase subunit 1 low > 96
Pseudomonas stutzeri RCH2 0.63 Psest_1692 conserved hypothetical protein, YceG family 0.91 Psest_4327 cytochrome c oxidase, subunit I low > 67
Pseudomonas sp. S08-1 0.62 OH686_22160 Murein endolytic transglycosylase MltG 0.93 OH686_12320 cytochrome c oxidase, subunit I low > 80
Marinobacter adhaerens HP15 0.44 HP15_2208 aminodeoxychorismate lyase 0.90 HP15_3772 cytochrome c oxidase, subunit I
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS06145 endolytic transglycosylase MltG 0.73 ABZR86_RS12925 cytochrome c oxidase subunit I low > 74
Acidovorax sp. GW101-3H11 0.37 Ac3H11_2492 FIG004453: protein YceG like 0.70 Ac3H11_3891 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 79
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_1749 conserved hypothetical protein, YceG family 0.77 B158DRAFT_0136 cytochrome c oxidase, subunit I low > 40
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_05740 Endolytic murein transglycosylase 0.74 OKGIIK_16520 ctaD cytochrome c oxidase subunit I low > 52
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS13025 aminodeoxychorismate lyase 0.70 HSERO_RS20785 cytochrome oxidase subunit I
Variovorax sp. SCN45 0.34 GFF30 Murein endolytic transglycosylase MltG 0.71 GFF2298 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 127
Variovorax sp. OAS795 0.34 ABID97_RS15980 endolytic transglycosylase MltG 0.70 ABID97_RS23960 cytochrome c oxidase subunit I low > 91
Rhodanobacter denitrificans MT42 0.34 LRK55_RS00935 endolytic transglycosylase MltG 0.73 LRK55_RS06860 cytochrome c oxidase subunit I low > 63
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS01160 endolytic transglycosylase MltG 0.73 LRK54_RS07120 cytochrome c oxidase subunit I low > 59
Alteromonas macleodii MIT1002 0.33 MIT1002_01737 putative aminodeoxychorismate lyase 0.78 MIT1002_04034 Cytochrome c oxidase subunit 1 low > 70
Lysobacter sp. OAE881 0.32 ABIE51_RS13920 endolytic transglycosylase MltG 0.69 ABIE51_RS19205 cytochrome c oxidase subunit I low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4661 FIG004453: protein YceG like 0.69 GFF689 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 90
Shewanella amazonensis SB2B 0.30 Sama_2044 hypothetical protein (RefSeq) 0.83 Sama_3484 cytochrome-c oxidase (RefSeq) low > 62
Castellaniella sp019104865 MT123 0.30 ABCV34_RS03975 endolytic transglycosylase MltG 0.71 ABCV34_RS13270 cytochrome c oxidase subunit I low > 48
Shewanella sp. ANA-3 0.29 Shewana3_1765 aminodeoxychorismate lyase (RefSeq) 0.82 Shewana3_3992 cytochrome c oxidase, subunit I (RefSeq) low > 73
Shewanella oneidensis MR-1 0.29 SO2614 conserved hypothetical protein TIGR00247 (NCBI ptt file) 0.82 SO4607 cytochrome c oxidase, subunit I (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.28 Shew_1578 aminodeoxychorismate lyase (RefSeq) 0.81 Shew_0124 cytochrome-c oxidase (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_0361 conserved hypothetical protein, YceG family 0.50 Ga0059261_2008 cytochrome c oxidase, subunit I low > 68
Rhodopseudomonas palustris CGA009 0.23 TX73_015885 endolytic transglycosylase MltG 0.54 TX73_004290 cytochrome c oxidase subunit I low > 86
Azospirillum sp. SherDot2 0.22 MPMX19_00941 Endolytic murein transglycosylase 0.54 MPMX19_00885 Cytochrome c oxidase subunit 1 low > 112
Dinoroseobacter shibae DFL-12 0.22 Dshi_2179 aminodeoxychorismate lyase (RefSeq) 0.49 Dshi_2383 Cytochrome c oxidase subunit I type (RefSeq)
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS06785 endolytic transglycosylase MltG 0.50 A4249_RS00110 cytochrome c oxidase subunit I low > 48
Phaeobacter inhibens DSM 17395 0.20 PGA1_c17880 putative aminodeoxychorismate lyase 0.49 PGA1_c06710 cytochrome c oxidase subunit 1-beta
Magnetospirillum magneticum AMB-1 0.20 AMB_RS10640 endolytic transglycosylase MltG 0.57 AMB_RS10960 cytochrome c oxidase subunit I low > 64
Echinicola vietnamensis KMM 6221, DSM 17526 0.15 Echvi_0372 conserved hypothetical protein, YceG family 0.35 Echvi_2103 Heme/copper-type cytochrome/quinol oxidases, subunit 1

Not shown: 32 genomes with orthologs for PS417_21420 only; 25 genomes with orthologs for PS417_00305 only