Conservation of cofitness between GFF149 and GFF5343 in Hydrogenophaga sp. GW460-11-11-14-LB1

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 1.0 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.44 12
Variovorax sp. OAS795 0.77 ABID97_RS07235 phosphoglycerate dehydrogenase 0.84 ABID97_RS09515 prephenate dehydratase — —
Acidovorax sp. GW101-3H11 0.76 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.82 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 79
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_08510 3-phosphoglycerate dehydrogenase 0.43 AO353_02070 prephenate dehydratase 0.74 37
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_10300 3-phosphoglycerate dehydrogenase 0.42 AO356_03465 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.42 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas fluorescens SBW25 0.75 PFLU_RS28695 phosphoglycerate dehydrogenase 0.42 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas simiae WCS417 0.75 PS417_27040 3-phosphoglycerate dehydrogenase 0.42 PS417_08125 prephenate dehydratase low > 88
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS28695 phosphoglycerate dehydrogenase 0.42 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas sp. RS175 0.75 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.42 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.43 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.74 33
Pseudomonas sp. S08-1 0.74 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.42 OH686_20870 Chorismate mutase I / Prephenate dehydratase low > 80
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.42 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.42 Psyr_3645 prephenate dehydratase — —
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.43 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.73 53
Variovorax sp. SCN45 0.74 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.83 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 127
Pseudomonas putida KT2440 0.73 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 0.42 PP_1769 chorismate mutase/Prephenate dehydratase — —
Pseudomonas stutzeri RCH2 0.73 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.42 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Marinobacter adhaerens HP15 0.68 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein 0.38 HP15_1362 chorismate mutase / prephenate dehydratase — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS02935 phosphoglycerate dehydrogenase 0.38 LRK55_RS00135 prephenate dehydratase 0.61 9
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_10055 serA phosphoglycerate dehydrogenase 0.38 OKGIIK_06915 pheA prephenate dehydratase low > 52
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS03185 phosphoglycerate dehydrogenase 0.38 LRK54_RS00395 prephenate dehydratase low > 59
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.39 ABZR86_RS02225 prephenate dehydratase 0.95 8
Acinetobacter radioresistens SK82 0.63 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.38 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase low > 36
Alteromonas macleodii MIT1002 0.62 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.23 MIT1002_01316 P-protein 0.79 56
Dickeya dianthicola ME23 0.62 DZA65_RS19540 phosphoglycerate dehydrogenase 0.19 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase 0.69 21
Dickeya dianthicola 67-19 0.62 HGI48_RS18400 phosphoglycerate dehydrogenase 0.19 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase low > 71
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.38 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.81 16
Dickeya dadantii 3937 0.62 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.19 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase 0.68 73
Enterobacter sp. TBS_079 0.62 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.21 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase 0.83 45
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.21 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) — —
Erwinia tracheiphila SCR3 0.61 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.19 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase 0.77 17
Pectobacterium carotovorum WPP14 0.61 HER17_RS02725 phosphoglycerate dehydrogenase 0.19 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.89 27
Klebsiella michiganensis M5al 0.61 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.20 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase 0.74 57
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_12555 phosphoglycerate dehydrogenase 0.22 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Serratia liquefaciens MT49 0.61 IAI46_20900 phosphoglycerate dehydrogenase 0.18 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase 0.76 30
Pantoea sp. MT58 0.60 IAI47_03725 phosphoglycerate dehydrogenase 0.19 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase 0.89 25
Rahnella sp. WP5 0.60 EX31_RS21470 phosphoglycerate dehydrogenase 0.17 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase 0.82 29
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.18 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 78
Lysobacter sp. OAE881 0.60 ABIE51_RS13245 phosphoglycerate dehydrogenase 0.38 ABIE51_RS12145 prephenate dehydratase 0.93 2
Escherichia coli ECRC99 0.60 KEDOAH_08680 serA phosphoglycerate dehydrogenase 0.21 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS16210 phosphoglycerate dehydrogenase 0.21 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase low > 52
Escherichia coli ECRC98 0.60 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.21 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECOR27 0.60 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.21 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase low > 57
Escherichia coli ECOR38 0.60 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.21 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase low > 85
Escherichia coli ECRC102 0.60 NIAGMN_17225 serA phosphoglycerate dehydrogenase 0.21 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 0.21 OHPLBJKB_01109 P-protein low > 73
Escherichia coli ECRC101 0.60 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.21 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli BL21 0.60 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.21 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.61 45
Escherichia coli BW25113 0.60 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.21 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.85 31
Escherichia coli ECRC101 0.60 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.21 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia fergusonii Becca 0.59 EFB2_00990 D-3-phosphoglycerate dehydrogenase 0.21 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Escherichia coli ECRC62 0.59 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.21 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS15150 phosphoglycerate dehydrogenase 0.44 ABCV34_RS07110 prephenate dehydratase — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS27010 D-3-phosphoglycerate dehydrogenase 0.54 RR42_RS04460 chorismate mutase low > 128

Not shown: 11 genomes with orthologs for GFF149 only; 13 genomes with orthologs for GFF5343 only