| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | 1.0 | GFF5156 | | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) | 0.91 | 12 |
| Variovorax sp. OAS795 | 0.95 | ABID97_RS06335 | | metalloprotease TldD | 0.96 | ABID97_RS06565 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.85 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.76 | GFF1624 | | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.73 | RR42_RS05875 | | protease TldD | 0.76 | RR42_RS02330 | | trehalose-6-phosphate synthase | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.73 | HSERO_RS07155 | | peptidase C69 | 0.73 | HSERO_RS00975 | | alpha,alpha-trehalose-phosphate synthase | low | > 78 |
| Ralstonia sp. UNC404CL21Col | 0.72 | ABZR87_RS01105 | | metalloprotease TldD | 0.49 | ABZR87_RS19430 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.72 | RS_RS13315 | | metalloprotease TldD | 0.49 | RS_RS22450 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.72 | BPHYT_RS03540 | | peptidase C69 | 0.49 | BPHYT_RS14260 | | trehalose-6-phosphate synthase | 0.26 | 55 |
| Ralstonia solanacearum UW163 | 0.72 | UW163_RS08170 | | metalloprotease TldD | 0.49 | UW163_RS20710 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.72 | RALBFv3_RS05455 | | metalloprotease TldD | 0.49 | RALBFv3_RS18420 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS11850 | | metalloprotease TldD | 0.49 | RPSI07_RS05135 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 81 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS26555 | | metalloprotease TldD | 0.48 | QEN71_RS04715 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 0.87 | 33 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.49 | H281DRAFT_04389 | | trehalose 6-phosphate synthase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.71 | ABIE53_000851 | | TldD protein | 0.47 | ABIE53_002170 | | trehalose 6-phosphate synthase | low | > 113 |
| Dyella japonica UNC79MFTsu3.2 | 0.62 | ABZR86_RS21715 | | metalloprotease TldD | 0.46 | ABZR86_RS10955 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.59 | Xcc-8004.1883.1 | | TldD protein, part of TldE/TldD proteolytic complex | 0.45 | Xcc-8004.1369.1 | | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) | low | > 74 |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS06795 | | metalloprotease TldD | 0.51 | ABIE51_RS04910 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 62 |
| Pantoea sp. MT58 | 0.58 | IAI47_02465 | | metalloprotease TldD | 0.44 | IAI47_08275 | | alpha,alpha-trehalose-phosphate synthase | low | > 76 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.48 | Psest_1061 | | alpha,alpha-trehalose-phosphate synthase [UDP-forming] | low | > 67 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_04151 | | Metalloprotease TldD | 0.45 | MPMX20_02804 | | Trehalose-6-phosphate synthase | low | > 85 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS25470 | | metalloprotease TldD | 0.45 | BWI76_RS18230 | | trehalose-6-phosphate synthase | low | > 92 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_10395 | tldD | metalloprotease TldD | 0.42 | KEDOAH_02015 | otsA | alpha,alpha-trehalose-phosphate synthase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_00460 | | Metalloprotease TldD | 0.42 | OHPLBJKB_01832 | | Trehalose-6-phosphate synthase | low | > 73 |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_17755 | tldD | metalloprotease TldD | 0.42 | OKFHMN_26090 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 80 |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_15515 | tldD | metalloprotease TldD | 0.42 | NIAGMN_01970 | otsA | alpha,alpha-trehalose-phosphate synthase | — | — |
| Escherichia fergusonii Becca | 0.55 | EFB2_00586 | | Metalloprotease TldD | 0.41 | EFB2_02049 | | Trehalose-6-phosphate synthase | low | > 86 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_16620 | tldD | metalloprotease TldD | 0.41 | HEPCGN_04510 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 87 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_08275 | tldD | metalloprotease TldD | 0.42 | MCAODC_19315 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 87 |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_21380 | tldD | metalloprotease TldD | 0.42 | JDDGAC_00665 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 86 |
| Escherichia coli ECRC62 | 0.55 | BNILDI_01980 | tldD | metalloprotease TldD | 0.42 | BNILDI_15320 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | 0.42 | GFF1675 | | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) | low | > 78 |
| Escherichia coli BW25113 | 0.55 | b3244 | tldD | predicted peptidase (NCBI) | 0.42 | b1896 | otsA | trehalose-6-phosphate synthase (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_09555 | tldD | metalloprotease TldD | 0.42 | NOLOHH_16530 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 75 |
| Escherichia coli BL21 | 0.55 | ECD_03104 | | putative peptidase | 0.42 | ECD_01865 | | trehalose-6-phosphate synthase | low | > 61 |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS18595 | | metalloprotease TldD | 0.41 | ECOLIN_RS10810 | | alpha,alpha-trehalose-phosphate synthase | — | — |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.45 | EX28DRAFT_0656 | | alpha,alpha-trehalose-phosphate synthase [UDP-forming] | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS21420 | tldD | metalloprotease TldD | 0.43 | LU632_RS13590 | otsA | alpha,alpha-trehalose-phosphate synthase | low | > 74 |
| Rahnella sp. WP5 | 0.54 | EX31_RS12265 | | metalloprotease TldD | 0.41 | EX31_RS01300 | | alpha,alpha-trehalose-phosphate synthase | low | > 89 |
| Rhodospirillum rubrum S1H | 0.54 | Rru_A0567 | | Peptidase U62, modulator of DNA gyrase (NCBI) | 0.45 | Rru_A2485 | | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS10600 | | peptidase C69 | 0.50 | AZOBR_RS05410 | | trehalose-6-phosphate synthase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_00882 | | Metalloprotease TldD | 0.51 | MPMX19_02239 | | Trehalose-6-phosphate synthase | low | > 112 |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS04050 | | metalloprotease TldD | 0.47 | ABIE40_RS01465 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.50 | SMc00960 | | hypothetical protein | 0.46 | SMa0233 | | OtsA trehalose-6-phosphate synthase | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_004255 | | metalloprotease TldD | 0.41 | TX73_024225 | | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 0.39 | 30 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.49 | A4249_RS10860 | | metalloprotease TldD | 0.47 | A4249_RS12285 | | trehalose-6-phosphate synthase | low | > 48 |
| Dinoroseobacter shibae DFL-12 | 0.48 | Dshi_1139 | | peptidase U62 modulator of DNA gyrase (RefSeq) | 0.21 | Dshi_3832 | | glucosylglycerol-phosphate synthase (RefSeq) | low | > 64 |
Not shown: 44 genomes with orthologs for GFF4449 only; 3 genomes with orthologs for GFF5156 only