Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas simiae WCS417 | 1.0 | PS417_22140 | | glucose/xylose ABC transporter, permease component 2 (from data) | 1.0 | PS417_22690 | | phosphogluconate dehydratase | 0.38 | 9 |
Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS23755 | | sugar ABC transporter permease | 0.99 | PFLU_RS24330 | | phosphogluconate dehydratase | 0.58 | 20 |
Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS23755 | | sugar ABC transporter permease | 0.99 | PFLU_RS24330 | | phosphogluconate dehydratase | 0.43 | 9 |
Pseudomonas sp. RS175 | 0.98 | PFR28_00567 | | Melibiose/raffinose/stachyose import permease protein MelD | 0.91 | PFR28_00561 | | Phosphogluconate dehydratase | 0.21 | 45 |
Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_05190 | | sugar ABC transporter permease | 0.91 | AO356_05220 | | phosphogluconate dehydratase | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.96 | Pf6N2E2_2891 | | Glucose ABC transport system, inner membrane component 1 | 0.91 | Pf6N2E2_2898 | | Phosphogluconate dehydratase (EC 4.2.1.12) | — | — |
Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_1114 | | glucose ABC transporter membrane protein | 0.88 | Psyr_1109 | | 6-phosphogluconate dehydratase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_1114 | | glucose ABC transporter membrane protein | 0.88 | Psyr_1109 | | 6-phosphogluconate dehydratase | low | > 86 |
Pseudomonas putida KT2440 | 0.92 | PP_1016 | | mannose/glucose ABC transporter, permease protein | 0.87 | PP_1010 | | phosphogluconate dehydratase | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_03390 | | sugar ABC transporter permease | 0.92 | AO353_03420 | | phosphogluconate dehydratase | 0.26 | 73 |
Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_595 | | Glucose ABC transport system, inner membrane component 1 | 0.92 | Pf1N1B4_601 | | Phosphogluconate dehydratase (EC 4.2.1.12) | — | — |
Pseudomonas fluorescens GW456-L13 | 0.91 | PfGW456L13_1895 | | ABC transporter for D-Galactose and D-Glucose, permease component 1 (from data) | 0.91 | PfGW456L13_1889 | | Phosphogluconate dehydratase (EC 4.2.1.12) | low | > 87 |
Pseudomonas sp. S08-1 | 0.89 | OH686_02465 | | Glucose ABC transport system, inner membrane component 1 | 0.81 | OH686_02490 | | phosphogluconate dehydratase | 0.99 | 7 |
Pseudomonas stutzeri RCH2 | 0.86 | Psest_1897 | | ABC-type sugar transport systems, permease components | 0.79 | Psest_1892 | | 6-phosphogluconate dehydratase | 0.24 | 67 |
Marinobacter adhaerens HP15 | 0.74 | HP15_2957 | | sugar ABC transporter, permease protein | 0.64 | HP15_2174 | | 6-phosphogluconate dehydratase | low | > 73 |
Acidovorax sp. GW101-3H11 | 0.66 | Ac3H11_2064 | | glucose ABC transporter, permease component 1 (from data) | 0.55 | Ac3H11_2082 | | Phosphogluconate dehydratase (EC 4.2.1.12) | — | — |
Azospirillum sp. SherDot2 | 0.62 | MPMX19_04061 | | hypothetical protein | 0.57 | MPMX19_05118 | | Phosphogluconate dehydratase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.61 | QEN71_RS03340 | | sugar ABC transporter permease | 0.61 | QEN71_RS26920 | | phosphogluconate dehydratase | 0.68 | 7 |
Burkholderia phytofirmans PsJN | 0.60 | BPHYT_RS05030 | | sugar ABC transporter permease | 0.61 | BPHYT_RS16735 | | phosphogluconate dehydratase | 0.62 | 6 |
Paraburkholderia bryophila 376MFSha3.1 | 0.60 | H281DRAFT_00167 | | carbohydrate ABC transporter membrane protein 1, CUT1 family | 0.61 | H281DRAFT_04278 | | 6-phosphogluconate dehydratase | 0.35 | 23 |
Paraburkholderia graminis OAS925 | 0.60 | ABIE53_001278 | | glucose/mannose transport system permease protein | 0.61 | ABIE53_003517 | | phosphogluconate dehydratase | 0.77 | 7 |
Sinorhizobium meliloti 1021 | 0.60 | SMc04395 | | ABC transporter permease | 0.58 | SMc03068 | | phosphogluconate dehydratase | low | > 103 |
Rhizobium sp. OAE497 | 0.56 | ABIE40_RS17185 | | sugar ABC transporter permease | 0.61 | ABIE40_RS03190 | | phosphogluconate dehydratase | low | > 107 |
Phaeobacter inhibens DSM 17395 | 0.43 | PGA1_c19490 | | ABC transporter, inner-membrane protein | 0.58 | PGA1_c28000 | | phosphogluconate dehydratase Edd | — | — |
Agrobacterium fabrum C58 | 0.41 | Atu3351 | | sugar ABC transporter permease | 0.60 | Atu0598 | | phosphogluconate dehydratase | 0.19 | 68 |
Herbaspirillum seropedicae SmR1 | 0.20 | HSERO_RS18950 | | glycerol-3-phosphate transporter permease | 0.60 | HSERO_RS05520 | | phosphogluconate dehydratase | — | — |
Dinoroseobacter shibae DFL-12 | 0.20 | Dshi_1247 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.55 | Dshi_1769 | | 6-phosphogluconate dehydratase (RefSeq) | low | > 64 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.20 | GFF1260 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | 0.58 | GFF5495 | | Phosphogluconate dehydratase (EC 4.2.1.12) | — | — |
Ralstonia solanacearum UW163 | 0.19 | UW163_RS13020 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.61 | UW163_RS17125 | | phosphogluconate dehydratase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.19 | RALBFv3_RS15560 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.61 | RALBFv3_RS16385 | | phosphogluconate dehydratase | 0.30 | 21 |
Ralstonia sp. UNC404CL21Col | 0.19 | ABZR87_RS11090 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.62 | ABZR87_RS22920 | | phosphogluconate dehydratase | 0.34 | 23 |
Variovorax sp. OAS795 | 0.19 | ABID97_RS29290 | | sugar ABC transporter permease | 0.55 | ABID97_RS21300 | | phosphogluconate dehydratase | low | > 91 |
Ralstonia solanacearum PSI07 | 0.19 | RPSI07_RS17795 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.62 | RPSI07_RS07320 | | phosphogluconate dehydratase | low | > 81 |
Cupriavidus basilensis FW507-4G11 | 0.18 | RR42_RS12965 | | glycerol-3-phosphate transporter permease | 0.61 | RR42_RS37440 | | phosphogluconate dehydratase | low | > 128 |
Variovorax sp. SCN45 | 0.17 | GFF2536 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | 0.54 | GFF6513 | | Phosphogluconate dehydratase (EC 4.2.1.12) | low | > 127 |
Serratia liquefaciens MT49 | 0.17 | IAI46_12945 | | sugar ABC transporter permease | 0.63 | IAI46_23175 | | phosphogluconate dehydratase | low | > 86 |
Lysobacter sp. OAE881 | 0.17 | ABIE51_RS08820 | | sugar ABC transporter permease | 0.55 | ABIE51_RS01610 | | phosphogluconate dehydratase | low | > 62 |
Klebsiella michiganensis M5al | 0.16 | BWI76_RS26300 | | glycerol-3-phosphate transporter permease | 0.63 | BWI76_RS18100 | | phosphogluconate dehydratase | low | > 92 |
Escherichia coli BW25113 | 0.15 | b3452 | ugpA | glycerol-3-phosphate transporter subunit (NCBI) | 0.63 | b1851 | edd | phosphogluconate dehydratase (NCBI) | low | > 76 |
Escherichia coli ECRC62 | 0.15 | BNILDI_02940 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.63 | BNILDI_15645 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli BL21 | 0.15 | ECD_03301 | | sn-glycerol-3-phosphate ABC transporter permease | 0.63 | ECD_01822 | | 6-phosphogluconate dehydratase | low | > 60 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.15 | OHPLBJKB_00251 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.63 | OHPLBJKB_01878 | | Phosphogluconate dehydratase | low | > 73 |
Escherichia coli ECOR38 | 0.15 | HEPCGN_15595 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.63 | HEPCGN_04745 | edd | phosphogluconate dehydratase | low | > 85 |
Escherichia coli ECOR27 | 0.15 | NOLOHH_08565 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.63 | NOLOHH_16850 | edd | phosphogluconate dehydratase | low | > 57 |
Escherichia coli ECRC102 | 0.15 | NIAGMN_14545 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.63 | NIAGMN_01720 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli ECRC101 | 0.15 | OKFHMN_16775 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.63 | OKFHMN_26340 | edd | phosphogluconate dehydratase | — | — |
Enterobacter asburiae PDN3 | 0.15 | EX28DRAFT_4284 | | ABC-type sugar transport systems, permease components | 0.63 | EX28DRAFT_0705 | | 6-phosphogluconate dehydratase (EC 4.2.1.12) | low | > 76 |
Escherichia coli ECRC99 | 0.15 | KEDOAH_11365 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.63 | KEDOAH_01765 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli ECRC98 | 0.15 | JDDGAC_20405 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.63 | JDDGAC_00915 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli ECRC101 | 0.15 | MCAODC_07305 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.63 | MCAODC_19065 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli Nissle 1917 | 0.15 | ECOLIN_RS19740 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.63 | ECOLIN_RS10310 | | phosphogluconate dehydratase | — | — |
Not shown: 8 genomes with orthologs for PS417_22140 only; 20 genomes with orthologs for PS417_22690 only