Conservation of cofitness between PS417_22140 and PS417_22690 in Pseudomonas simiae WCS417

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_22140 glucose/xylose ABC transporter, permease component 2 (from data) 1.0 PS417_22690 phosphogluconate dehydratase 0.38 9
Pseudomonas fluorescens SBW25 0.99 PFLU_RS23755 sugar ABC transporter permease 0.99 PFLU_RS24330 phosphogluconate dehydratase 0.58 20
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS23755 sugar ABC transporter permease 0.99 PFLU_RS24330 phosphogluconate dehydratase 0.43 9
Pseudomonas sp. RS175 0.98 PFR28_00567 Melibiose/raffinose/stachyose import permease protein MelD 0.91 PFR28_00561 Phosphogluconate dehydratase 0.21 45
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_05190 sugar ABC transporter permease 0.91 AO356_05220 phosphogluconate dehydratase
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2891 Glucose ABC transport system, inner membrane component 1 0.91 Pf6N2E2_2898 Phosphogluconate dehydratase (EC 4.2.1.12)
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_1114 glucose ABC transporter membrane protein 0.88 Psyr_1109 6-phosphogluconate dehydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_1114 glucose ABC transporter membrane protein 0.88 Psyr_1109 6-phosphogluconate dehydratase low > 86
Pseudomonas putida KT2440 0.92 PP_1016 mannose/glucose ABC transporter, permease protein 0.87 PP_1010 phosphogluconate dehydratase
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_03390 sugar ABC transporter permease 0.92 AO353_03420 phosphogluconate dehydratase 0.26 73
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_595 Glucose ABC transport system, inner membrane component 1 0.92 Pf1N1B4_601 Phosphogluconate dehydratase (EC 4.2.1.12)
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_1895 ABC transporter for D-Galactose and D-Glucose, permease component 1 (from data) 0.91 PfGW456L13_1889 Phosphogluconate dehydratase (EC 4.2.1.12) low > 87
Pseudomonas sp. S08-1 0.89 OH686_02465 Glucose ABC transport system, inner membrane component 1 0.81 OH686_02490 phosphogluconate dehydratase 0.99 7
Pseudomonas stutzeri RCH2 0.86 Psest_1897 ABC-type sugar transport systems, permease components 0.79 Psest_1892 6-phosphogluconate dehydratase 0.24 67
Marinobacter adhaerens HP15 0.74 HP15_2957 sugar ABC transporter, permease protein 0.64 HP15_2174 6-phosphogluconate dehydratase low > 73
Acidovorax sp. GW101-3H11 0.66 Ac3H11_2064 glucose ABC transporter, permease component 1 (from data) 0.55 Ac3H11_2082 Phosphogluconate dehydratase (EC 4.2.1.12)
Azospirillum sp. SherDot2 0.62 MPMX19_04061 hypothetical protein 0.57 MPMX19_05118 Phosphogluconate dehydratase
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS03340 sugar ABC transporter permease 0.61 QEN71_RS26920 phosphogluconate dehydratase 0.68 7
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS05030 sugar ABC transporter permease 0.61 BPHYT_RS16735 phosphogluconate dehydratase 0.62 6
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_00167 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.61 H281DRAFT_04278 6-phosphogluconate dehydratase 0.35 23
Paraburkholderia graminis OAS925 0.60 ABIE53_001278 glucose/mannose transport system permease protein 0.61 ABIE53_003517 phosphogluconate dehydratase 0.77 7
Sinorhizobium meliloti 1021 0.60 SMc04395 ABC transporter permease 0.58 SMc03068 phosphogluconate dehydratase low > 103
Rhizobium sp. OAE497 0.56 ABIE40_RS17185 sugar ABC transporter permease 0.61 ABIE40_RS03190 phosphogluconate dehydratase low > 107
Phaeobacter inhibens DSM 17395 0.43 PGA1_c19490 ABC transporter, inner-membrane protein 0.58 PGA1_c28000 phosphogluconate dehydratase Edd
Agrobacterium fabrum C58 0.41 Atu3351 sugar ABC transporter permease 0.60 Atu0598 phosphogluconate dehydratase 0.19 68
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS18950 glycerol-3-phosphate transporter permease 0.60 HSERO_RS05520 phosphogluconate dehydratase
Dinoroseobacter shibae DFL-12 0.20 Dshi_1247 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.55 Dshi_1769 6-phosphogluconate dehydratase (RefSeq) low > 64
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF1260 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) 0.58 GFF5495 Phosphogluconate dehydratase (EC 4.2.1.12)
Ralstonia solanacearum UW163 0.19 UW163_RS13020 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.61 UW163_RS17125 phosphogluconate dehydratase
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS15560 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.61 RALBFv3_RS16385 phosphogluconate dehydratase 0.30 21
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS11090 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.62 ABZR87_RS22920 phosphogluconate dehydratase 0.34 23
Variovorax sp. OAS795 0.19 ABID97_RS29290 sugar ABC transporter permease 0.55 ABID97_RS21300 phosphogluconate dehydratase low > 91
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17795 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.62 RPSI07_RS07320 phosphogluconate dehydratase low > 81
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS12965 glycerol-3-phosphate transporter permease 0.61 RR42_RS37440 phosphogluconate dehydratase low > 128
Variovorax sp. SCN45 0.17 GFF2536 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) 0.54 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) low > 127
Serratia liquefaciens MT49 0.17 IAI46_12945 sugar ABC transporter permease 0.63 IAI46_23175 phosphogluconate dehydratase low > 86
Lysobacter sp. OAE881 0.17 ABIE51_RS08820 sugar ABC transporter permease 0.55 ABIE51_RS01610 phosphogluconate dehydratase low > 62
Klebsiella michiganensis M5al 0.16 BWI76_RS26300 glycerol-3-phosphate transporter permease 0.63 BWI76_RS18100 phosphogluconate dehydratase low > 92
Escherichia coli BW25113 0.15 b3452 ugpA glycerol-3-phosphate transporter subunit (NCBI) 0.63 b1851 edd phosphogluconate dehydratase (NCBI) low > 76
Escherichia coli ECRC62 0.15 BNILDI_02940 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.63 BNILDI_15645 edd phosphogluconate dehydratase
Escherichia coli BL21 0.15 ECD_03301 sn-glycerol-3-phosphate ABC transporter permease 0.63 ECD_01822 6-phosphogluconate dehydratase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_00251 sn-glycerol-3-phosphate transport system permease protein UgpA 0.63 OHPLBJKB_01878 Phosphogluconate dehydratase low > 73
Escherichia coli ECOR38 0.15 HEPCGN_15595 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.63 HEPCGN_04745 edd phosphogluconate dehydratase low > 85
Escherichia coli ECOR27 0.15 NOLOHH_08565 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.63 NOLOHH_16850 edd phosphogluconate dehydratase low > 57
Escherichia coli ECRC102 0.15 NIAGMN_14545 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.63 NIAGMN_01720 edd phosphogluconate dehydratase
Escherichia coli ECRC101 0.15 OKFHMN_16775 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.63 OKFHMN_26340 edd phosphogluconate dehydratase
Enterobacter asburiae PDN3 0.15 EX28DRAFT_4284 ABC-type sugar transport systems, permease components 0.63 EX28DRAFT_0705 6-phosphogluconate dehydratase (EC 4.2.1.12) low > 76
Escherichia coli ECRC99 0.15 KEDOAH_11365 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.63 KEDOAH_01765 edd phosphogluconate dehydratase
Escherichia coli ECRC98 0.15 JDDGAC_20405 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.63 JDDGAC_00915 edd phosphogluconate dehydratase
Escherichia coli ECRC101 0.15 MCAODC_07305 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.63 MCAODC_19065 edd phosphogluconate dehydratase
Escherichia coli Nissle 1917 0.15 ECOLIN_RS19740 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.63 ECOLIN_RS10310 phosphogluconate dehydratase

Not shown: 8 genomes with orthologs for PS417_22140 only; 20 genomes with orthologs for PS417_22690 only