Conservation of cofitness between GFF2504 and GFF4133 in Sphingobium sp. HT1-2

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF2504 Na(+)-dependent bicarbonate transporter BicA 1.0 GFF4133 tRNA-5-carboxymethylaminomethyl-2- thiouridine(34) synthesis protein MnmE 0.47 89
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.3354.1 Sulfate transporter family protein in cluster with carbonic anhydrase 0.26 Xcc-8004.5407.1 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 74
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS08195 SulP family inorganic anion transporter 0.26 ABZR86_RS15115 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Pseudomonas fluorescens SBW25 0.49 PFLU_RS00280 SulP family inorganic anion transporter 0.26 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS00280 SulP family inorganic anion transporter 0.26 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas aeruginosa PA14 0.49 IKLFDK_25030 SulP family inorganic anion transporter 0.28 IKLFDK_25575 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 100
Pseudomonas sp. DMC3 0.49 GFF654 hypothetical protein 0.27 GFF573 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_1850 Sulfate transporter family protein in cluster with carbonic anhydrase 0.26 Pf1N1B4_1933 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_0287 Sulphate transporter 0.27 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_0287 Sulphate transporter 0.27 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas lactucae CFBP13502 0.48 GEMAOFIL_00261 hypothetical protein 0.27 GEMAOFIL_00178 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_10820 SulP family inorganic anion transporter 0.27 AO353_10455 tRNA modification GTPase MnmE low > 101
Pseudomonas sp. BP01 0.48 JOY50_RS21225 SulP family inorganic anion transporter 0.27 JOY50_RS08375 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas sp. SVBP6 0.48 COO64_RS02360 SulP family inorganic anion transporter 0.27 COO64_RS02085 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas putida KT2440 0.48 PP_0101 putative sulfate transporter 0.26 PP_0005 GTPase — —
Pseudomonas simiae WCS417 0.47 PS417_00290 SulP family inorganic anion transporter 0.26 PS417_28540 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_618 Sulfate transporter family protein in cluster with carbonic anhydrase 0.26 PfGW456L13_670 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas sp. RS175 0.46 PFR28_04693 hypothetical protein 0.26 PFR28_04588 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_11150 SulP family inorganic anion transporter 0.27 AO356_11660 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4096 Sulfate transporter family protein in cluster with carbonic anhydrase 0.26 Pf6N2E2_4202 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Paraburkholderia graminis OAS925 0.26 ABIE53_001581 MFS superfamily sulfate permease-like transporter 0.27 ABIE53_000332 tRNA modification GTPase — —
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS06575 membrane protein 0.26 BPHYT_RS19830 tRNA modification GTPase TrmE — —
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_04557 Sulfate permease, MFS superfamily 0.26 H281DRAFT_02320 tRNA modification GTPase trmE — —
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS16625 hypothetical protein 0.24 CA265_RS10450 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS14630 SulP family inorganic anion transporter 0.24 ABZR88_RS02725 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS35400 SulP family inorganic anion transporter 0.26 QEN71_RS29655 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS22855 SulP family inorganic anion transporter 0.29 RALBFv3_RS09410 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum UW163 0.25 UW163_RS23475 SulP family inorganic anion transporter 0.29 UW163_RS04170 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum PSI07 0.25 RPSI07_RS00365 SulP family inorganic anion transporter 0.29 RPSI07_RS23950 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum GMI1000 0.25 RS_RS17695 SulP family inorganic anion transporter 0.28 RS_RS00020 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS16715 SulP family inorganic anion transporter 0.28 ABZR87_RS05350 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_02625 hypothetical protein 0.24 CA264_06625 tRNA modification GTPase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_3879 Sulfate permease and related transporters (MFS superfamily) 0.23 Echvi_3509 tRNA modification GTPase TrmE — —
Pantoea agglomerans CFBP13505 P0401 0.22 PagCFBP13505_RS11585 SulP family inorganic anion transporter 0.30 PagCFBP13505_RS19345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pantoea sp. MT58 0.22 IAI47_02975 SulP family inorganic anion transporter 0.30 IAI47_18830 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 76
Methylophilus sp. DMC18 0.22 GFF425 C4-dicarboxylic acid transporter DauA 0.28 GFF2105 tRNA modification GTPase MnmE low > 43
Pectobacterium carotovorum WPP14 0.20 HER17_RS19290 SulP family inorganic anion transporter 0.31 HER17_RS21825 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Klebsiella pneumoniae MKP103 0.20 KDGMDA_11635 sulfate permease 0.31 KDGMDA_08700 tRNA modification GTPase MnmE low > 95
Erwinia tracheiphila SCR3 0.19 LU632_RS02400 SulP family inorganic anion transporter 0.30 LU632_RS25300 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Erwinia tracheiphila HP pepo 2.2 0.19 IJEDHG_06505 SulP family inorganic anion transporter 0.30 IJEDHG_09755 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Desulfovibrio vulgaris Hildenborough JW710 0.18 DVU0279 sulfate permease family protein (TIGR) 0.23 DVU1079 trmE tRNA modification GTPase TrmE (TIGR) low > 55
Erwinia amylovora T8 0.18 OLJFJH_02150 SulP family inorganic anion transporter 0.31 OLJFJH_05190 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Sinorhizobium meliloti 1021 0.16 SMc00476 transport transmembrane protein 0.36 SMc02797 tRNA modification GTPase TrmE — —
Shewanella loihica PV-4 0.13 Shew_0497 putative sulfate transporter YchM (RefSeq) 0.28 Shew_3865 trmE tRNA modification GTPase TrmE (RefSeq) — —

Not shown: 0 genomes with orthologs for GFF2504 only; 73 genomes with orthologs for GFF4133 only