Conservation of cofitness between Psest_1016 and Psest_3658 in Pseudomonas stutzeri RCH2

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1016 putative TIM-barrel protein, nifR3 family 1.0 Psest_3658 spermidine/putrescine ABC transporter ATP-binding subunit 0.24 17
Pseudomonas sp. S08-1 0.80 OH686_07610 tRNA-dihydrouridine synthase DusB 0.84 OH686_15095 Spermidine/putrescine import ABC transporter ATP-binding protein PotA low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_4404 tRNA-U20-dihydrouridine synthase 0.83 Psyr_4615 Spermidine/putrescine ABC transporter ATP-binding subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_4404 tRNA-U20-dihydrouridine synthase 0.83 Psyr_4615 Spermidine/putrescine ABC transporter ATP-binding subunit low > 86
Pseudomonas simiae WCS417 0.78 PS417_02950 tRNA-dihydrouridine synthase B 0.83 PS417_25760 spermidine/putrescine ABC transporter ATP-binding protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS03025 tRNA dihydrouridine synthase DusB 0.83 PFLU_RS27415 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.78 PFLU_RS03025 tRNA dihydrouridine synthase DusB 0.83 PFLU_RS27415 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_08215 tRNA-dihydrouridine synthase B 0.83 AO356_14385 spermidine/putrescine ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_1313 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.83 Pf1N1B4_2538 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) low > 87
Pseudomonas sp. RS175 0.77 PFR28_05216 tRNA-dihydrouridine synthase B 0.83 PFR28_04054 Vitamin B12 import ATP-binding protein BtuD low > 88
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_13660 tRNA-dihydrouridine synthase B 0.84 AO353_07265 spermidine/putrescine ABC transporter ATP-binding protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_3517 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.83 Pf6N2E2_4815 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) low > 103
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_55 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.83 PfGW456L13_1210 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) low > 87
Pseudomonas putida KT2440 0.76 PP_4820 tRNA-dihydrouridine synthase B 0.82 PP_0411 Polyamine ABC transporter, ATP-binding protein low > 96
Ralstonia solanacearum PSI07 0.61 RPSI07_RS21520 tRNA dihydrouridine synthase DusB 0.53 RPSI07_RS16240 ABC transporter ATP-binding protein low > 81
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS11695 tRNA dihydrouridine synthase DusB 0.53 RALBFv3_RS01235 ABC transporter ATP-binding protein — —
Ralstonia solanacearum UW163 0.60 UW163_RS01890 tRNA dihydrouridine synthase DusB 0.53 UW163_RS14545 ABC transporter ATP-binding protein — —
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS26770 tRNA dihydrouridine synthase DusB 0.59 QEN71_RS36445 ABC transporter ATP-binding protein low > 153
Ralstonia solanacearum GMI1000 0.60 RS_RS02515 tRNA dihydrouridine synthase DusB 0.53 RS_RS08760 ABC transporter ATP-binding protein low > 80
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS07650 tRNA dihydrouridine synthase DusB 0.54 ABZR87_RS12690 ABC transporter ATP-binding protein low > 80
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS02050 tRNA-dihydrouridine synthase B 0.57 HSERO_RS05415 spermidine/putrescine ABC transporter ATPase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04249 tRNA-U20-dihydrouridine synthase 0.53 H281DRAFT_03508 putative spermidine/putrescine transport system ATP-binding protein low > 103
Paraburkholderia graminis OAS925 0.57 ABIE53_003489 tRNA-dihydrouridine synthase B 0.54 ABIE53_004749 putative spermidine/putrescine transport system ATP-binding protein low > 113
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS16585 tRNA-dihydrouridine synthase B 0.54 BPHYT_RS34100 spermidine/putrescine ABC transporter ATP-binding protein low > 109
Castellaniella sp019104865 MT123 0.56 ABCV34_RS07960 tRNA dihydrouridine synthase DusB 0.53 ABCV34_RS01760 ABC transporter ATP-binding protein low > 48
Rahnella sp. WP5 0.56 EX31_RS12180 tRNA dihydrouridine synthase DusB 0.58 EX31_RS00085 ABC transporter ATP-binding protein low > 89
Pectobacterium carotovorum WPP14 0.55 HER17_RS20235 tRNA dihydrouridine synthase DusB 0.58 HER17_RS09870 ABC transporter ATP-binding protein 0.68 69
Dickeya dianthicola 67-19 0.55 HGI48_RS01295 tRNA dihydrouridine synthase DusB 0.57 HGI48_RS11870 ABC transporter ATP-binding protein low > 71
Dickeya dadantii 3937 0.55 DDA3937_RS01375 tRNA dihydrouridine synthase DusB 0.58 DDA3937_RS11840 ABC transporter ATP-binding protein low > 74
Dickeya dianthicola ME23 0.54 DZA65_RS01355 tRNA dihydrouridine synthase DusB 0.57 DZA65_RS12415 ABC transporter ATP-binding protein low > 75
Variovorax sp. OAS795 0.54 ABID97_RS24735 tRNA dihydrouridine synthase DusB 0.53 ABID97_RS21580 ABC transporter ATP-binding protein low > 91
Variovorax sp. SCN45 0.53 GFF2144 tRNA-dihydrouridine synthase DusB 0.36 GFF2425 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) low > 127
Acidovorax sp. GW101-3H11 0.50 Ac3H11_3996 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.51 Ac3H11_4180 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) low > 79
Azospirillum sp. SherDot2 0.46 MPMX19_01110 tRNA-dihydrouridine synthase B 0.56 MPMX19_04925 sn-glycerol-3-phosphate import ATP-binding protein UgpC low > 112
Azospirillum brasilense Sp245 0.44 AZOBR_RS14420 tRNA-dihydrouridine synthase 0.37 AZOBR_RS24095 ABC transporter low > 97
Agrobacterium fabrum C58 0.37 Atu1444 nitrogen regulation protein 0.42 Atu4246 polyamine ABC transporter ATPase low > 89
Sinorhizobium meliloti 1021 0.36 SMc01041 NIFR3-like protein 0.48 SMa1754 ABC transporter ATP-binding protein low > 103
Rhodospirillum rubrum S1H 0.35 Rru_A1676 Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) 0.59 Rru_A2048 ABC transporter component (NCBI) low > 58
Phaeobacter inhibens DSM 17395 0.35 PGA1_c14770 tRNA-dihydrouridine synthase DusB 0.55 PGA1_c34390 spermidine/putrescine import ATP-binding protein PotA low > 62
Rhodopseudomonas palustris CGA009 0.34 TX73_013410 tRNA dihydrouridine synthase DusB 0.41 TX73_024145 ABC transporter ATP-binding protein low > 86
Fusobacterium nucleatum SB010 0.24 HUW76_04330 tRNA-dihydrouridine synthase 0.37 HUW76_02670 ABC transporter ATP-binding protein low > 35

Not shown: 54 genomes with orthologs for Psest_1016 only; 3 genomes with orthologs for Psest_3658 only