Conservation of cofitness between PS417_14810 and PS417_16970 in Pseudomonas simiae WCS417

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_14810 Fosmidomycin resistance protein 1.0 PS417_16970 membrane protein 0.23 6
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS16820 MFS transporter 0.98 PFLU_RS18920 outer membrane protein assembly factor low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS16820 MFS transporter 0.98 PFLU_RS18920 outer membrane protein assembly factor low > 109
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_3597 fosmidomycin resistance protein 0.88 PfGW456L13_2601 Uncharacterized protein YtfM precursor low > 87
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_2910 fosmidomycin resistance protein 0.88 Pf1N1B4_3997 Uncharacterized protein YtfM precursor low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_14690 Fosmidomycin resistance protein 0.89 AO353_27865 hypothetical protein low > 101
Pseudomonas sp. RS175 0.78 PFR28_03669 Fosmidomycin resistance protein 0.85 PFR28_02752 Translocation and assembly module subunit TamA 0.21 33
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_1681 Major facilitator superfamily 0.78 Psyr_2478 surface antigen (D15):Surface antigen variable number low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_1681 Major facilitator superfamily 0.78 Psyr_2478 surface antigen (D15):Surface antigen variable number low > 86
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_5200 fosmidomycin resistance protein 0.87 Pf6N2E2_144 Uncharacterized protein YtfM precursor low > 103
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_16400 Fosmidomycin resistance protein 0.86 AO356_01050 hypothetical protein low > 104
Pseudomonas putida KT2440 0.72 PP_0701 fosmidomycin efflux system 0.80 PP_2892 conserved exported protein of unknown function low > 96
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS04890 Fosmidomycin resistance protein 0.16 HSERO_RS07725 membrane protein low > 78
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS05125 MFS transporter 0.14 QEN71_RS25050 autotransporter assembly complex family protein low > 153
Rahnella sp. WP5 0.60 EX31_RS22560 MFS transporter 0.27 EX31_RS08695 outer membrane protein assembly factor low > 89
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_04472 MFS transporter, FSR family, fosmidomycin resistance protein 0.14 H281DRAFT_00153 autotransporter secretion outer membrane protein TamA low > 103
Paraburkholderia graminis OAS925 0.58 ABIE53_002935 FSR family fosmidomycin resistance protein-like MFS transporter 0.14 ABIE53_001263 translocation and assembly module TamA low > 113
Rhodanobacter denitrificans MT42 0.58 LRK55_RS15750 MFS transporter 0.20 LRK55_RS12405 autotransporter assembly complex family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS15995 MFS transporter 0.20 LRK54_RS12665 autotransporter assembly complex protein TamA low > 59
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS13825 Fosmidomycin resistance protein 0.14 BPHYT_RS04945 membrane protein low > 109
Klebsiella michiganensis M5al 0.58 BWI76_RS06860 MFS transporter 0.27 BWI76_RS02775 outer membrane protein assembly factor 0.18 34
Escherichia coli BL21 0.57 ECD_00430 putative fosmidomycin efflux system protein 0.27 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit low > 60
Serratia liquefaciens MT49 0.57 IAI46_05285 MFS transporter 0.29 IAI46_01770 outer membrane protein assembly factor low > 86
Escherichia coli ECRC98 0.57 JDDGAC_11765 fsr fosmidomycin MFS transporter 0.27 JDDGAC_15640 tamA autotransporter assembly complex protein TamA — —
Escherichia coli ECRC102 0.57 NIAGMN_06170 fsr fosmidomycin MFS transporter 0.27 NIAGMN_09850 tamA autotransporter assembly complex protein TamA — —
Escherichia coli ECRC101 0.57 MCAODC_27340 fsr fosmidomycin MFS transporter 0.27 MCAODC_02515 tamA autotransporter assembly complex protein TamA — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS02840 fosmidomycin MFS transporter 0.27 ECOLIN_RS24510 autotransporter assembly complex protein TamA low > 52
Escherichia coli BW25113 0.57 b0479 fsr predicted fosmidomycin efflux system (NCBI) 0.27 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_03195 Fosmidomycin resistance protein 0.27 OHPLBJKB_03813 Translocation and assembly module subunit TamA low > 73
Escherichia coli ECRC101 0.57 OKFHMN_08115 fsr fosmidomycin MFS transporter 0.27 OKFHMN_12000 tamA autotransporter assembly complex protein TamA — —
Escherichia fergusonii Becca 0.57 EFB2_03579 Fosmidomycin resistance protein 0.27 EFB2_04309 Translocation and assembly module subunit TamA low > 86
Escherichia coli ECOR38 0.57 HEPCGN_06735 fsr fosmidomycin MFS transporter 0.27 HEPCGN_10200 tamA autotransporter assembly complex protein TamA low > 85
Escherichia coli ECRC99 0.57 KEDOAH_19850 fsr fosmidomycin MFS transporter 0.27 KEDOAH_16155 tamA autotransporter assembly complex protein TamA — —
Escherichia coli ECRC62 0.57 BNILDI_22465 fsr fosmidomycin MFS transporter 0.27 BNILDI_07255 tamA autotransporter assembly complex protein TamA — —
Escherichia coli ECOR27 0.57 NOLOHH_01045 fsr fosmidomycin MFS transporter 0.27 NOLOHH_04260 tamA autotransporter assembly complex protein TamA low > 57
Erwinia tracheiphila SCR3 0.57 LU632_RS18070 MFS transporter 0.29 LU632_RS02105 autotransporter assembly complex protein TamA low > 74
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2479 Nitrate/nitrite transporter 0.28 EX28DRAFT_3406 Outer membrane protein 0.66 39
Enterobacter sp. TBS_079 0.56 MPMX20_01080 Fosmidomycin resistance protein 0.28 MPMX20_00503 Translocation and assembly module subunit TamA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4399 Fosmidomycin resistance protein 0.27 GFF874 Uncharacterized protein YtfM precursor low > 78
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS21910 MFS transporter 0.13 ABZR87_RS00015 autotransporter assembly complex family protein 0.33 68
Ralstonia solanacearum GMI1000 0.54 RS_RS19145 MFS transporter 0.14 RS_RS11970 outer membrane protein assembly factor low > 80
Ralstonia solanacearum PSI07 0.53 RPSI07_RS01655 MFS transporter 0.14 RPSI07_RS12950 outer membrane protein assembly factor low > 81
Castellaniella sp019104865 MT123 0.53 ABCV34_RS03495 MFS transporter 0.11 ABCV34_RS08915 BamA/TamA family outer membrane protein low > 48
Ralstonia solanacearum UW163 0.53 UW163_RS17710 MFS transporter 0.14 UW163_RS09250 outer membrane protein assembly factor — —
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS21480 MFS transporter 0.14 RALBFv3_RS04420 outer membrane protein assembly factor low > 76
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS00400 fosmidomycin resistance protein 0.16 RR42_RS16040 membrane protein low > 128
Azospirillum sp. SherDot2 0.52 MPMX19_03576 Fosmidomycin resistance protein 0.09 MPMX19_01377 Outer membrane protein assembly factor BamA low > 112
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS07470 MFS transporter 0.20 ABZR86_RS19705 autotransporter assembly complex family protein low > 74
Variovorax sp. SCN45 0.15 GFF6472 membrane efflux protein 0.13 GFF2183 Outer membrane component of TAM transport system low > 127

Not shown: 13 genomes with orthologs for PS417_14810 only; 22 genomes with orthologs for PS417_16970 only