Conservation of cofitness between Psest_1879 and Psest_3314 in Pseudomonas stutzeri RCH2

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1879 Trk-type K+ transport systems, membrane components 1.0 Psest_3314 ribosomal subunit interface protein 0.37 3
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_18480 potassium transporter TrkH 0.66 AO353_05185 hypothetical protein low > 101
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_4413 Potassium uptake protein TrkH 0.67 PfGW456L13_5015 Ribosome hibernation protein YhbH low > 87
Pseudomonas simiae WCS417 0.69 PS417_22205 potassium transporter TrkH 0.66 PS417_04340 ribosome hibernation promoting factor HPF low > 88
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3593 K+ transporter Trk 0.66 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3593 K+ transporter Trk 0.66 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P low > 86
Pseudomonas putida KT2440 0.68 PP_4507 potassium transporter 0.67 PP_0951 Ribosome hibernation promoting factor low > 96
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_03995 potassium transporter TrkH 0.68 AO356_07040 hypothetical protein low > 104
Pseudomonas sp. RS175 0.68 PFR28_00798 Trk system potassium uptake protein TrkI 0.65 PFR28_00172 Ribosome hibernation promoting factor low > 88
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_3543 Potassium uptake protein TrkH 0.68 Pf1N1B4_1081 Ribosome hibernation protein YhbH low > 87
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_573 Potassium uptake protein TrkH 0.68 Pf6N2E2_3268 Ribosome hibernation protein YhbH low > 103
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS23830 TrkH family potassium uptake protein 0.66 PFLU_RS04395 ribosome-associated translation inhibitor RaiA 0.25 60
Pseudomonas fluorescens SBW25 0.67 PFLU_RS23830 TrkH family potassium uptake protein 0.66 PFLU_RS04395 ribosome-associated translation inhibitor RaiA low > 109
Pseudomonas sp. S08-1 0.66 OH686_20750 Trk potassium uptake system protein TrkH 0.77 OH686_08550 Ribosome hibernation promoting factor Hpf — —
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_00215 potassium uptake protein TrkH 0.56 CSW01_12820 ribosome hibernation promoting factor low > 62
Shewanella amazonensis SB2B 0.52 Sama_0039 potassium uptake protein TrkH (RefSeq) 0.62 Sama_3089 ribosomal subunit interface protein (RefSeq) low > 62
Shewanella loihica PV-4 0.50 Shew_3740 TrkH family potassium uptake protein (RefSeq) 0.62 Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) 0.43 6
Shewanella sp. ANA-3 0.50 Shewana3_0031 TrkH family potassium uptake protein (RefSeq) 0.60 Shewana3_0671 sigma 54 modulation protein / SSU ribosomal protein S30P (RefSeq) low > 73
Shewanella oneidensis MR-1 0.49 SO0028 trkH-2 potassium uptake protein TrkH (NCBI ptt file) 0.59 SO3962 yfiA-3 ribosomal subunit interface protein (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.45 HP15_1705 potassium uptake protein, TrkH family 0.64 HP15_2443 sigma 54 modulation protein/ribosomal protein S30EA — —
Alteromonas macleodii MIT1002 0.30 MIT1002_00016 Trk system potassium uptake protein TrkH 0.62 MIT1002_00826 Ribosome hibernation promoting factor — —
Acidovorax sp. GW101-3H11 0.29 Ac3H11_706 Potassium uptake protein TrkH 0.54 Ac3H11_681 Ribosome hibernation protein YhbH low > 79
Dechlorosoma suillum PS 0.29 Dsui_0807 Trk-type K+ transport system, membrane component 0.54 Dsui_0703 ribosomal subunit interface protein low > 51
Phocaeicola dorei CL03T12C01 0.29 ABI39_RS08550 TrkH family potassium uptake protein 0.26 ABI39_RS03830 ribosome-associated translation inhibitor RaiA low > 72
Phocaeicola vulgatus CL09T03C04 0.29 HMPREF1058_RS13345 TrkH family potassium uptake protein 0.26 HMPREF1058_RS09440 ribosome-associated translation inhibitor RaiA 0.53 40
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0394 potassium uptake protein, TrkH family 0.63 B158DRAFT_2079 ribosomal subunit interface protein — —
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS13010 TrkH family potassium uptake protein 0.25 HMPREF1078_RS10880 ribosome-associated translation inhibitor RaiA low > 61
Serratia liquefaciens MT49 0.26 IAI46_08985 potassium transporter TrkG 0.52 IAI46_22475 ribosome hibernation promoting factor low > 86
Enterobacter asburiae PDN3 0.26 EX28DRAFT_3052 potassium uptake protein, TrkH family 0.50 EX28DRAFT_3257 ribosomal subunit interface protein low > 76
Dickeya dianthicola 67-19 0.25 HGI48_RS00990 Trk system potassium transporter TrkH 0.51 HGI48_RS01440 ribosome hibernation promoting factor low > 71
Pantoea sp. MT58 0.25 IAI47_18215 Trk system potassium transporter TrkH 0.50 IAI47_17190 ribosome hibernation promoting factor low > 76
Dickeya dadantii 3937 0.25 DDA3937_RS20235 Trk system potassium transporter TrkH 0.52 DDA3937_RS01525 ribosome hibernation promoting factor low > 74
Dickeya dianthicola ME23 0.25 DZA65_RS01050 Trk system potassium transporter TrkH 0.51 DZA65_RS01505 ribosome hibernation promoting factor low > 75
Erwinia tracheiphila SCR3 0.25 LU632_RS23935 trkH Trk system potassium transporter TrkH 0.49 LU632_RS21285 hpf ribosome hibernation promoting factor low > 74
Pectobacterium carotovorum WPP14 0.25 HER17_RS20535 Trk system potassium transporter TrkH 0.54 HER17_RS20065 ribosome hibernation promoting factor 0.57 52
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF1719 Potassium uptake protein TrkH 0.54 GFF2612 Ribosome hibernation protein YhbH low > 90
Enterobacter sp. TBS_079 0.25 MPMX20_03858 Trk system potassium uptake protein TrkG 0.50 MPMX20_04109 Ribosome hibernation promoting factor low > 85
Rahnella sp. WP5 0.25 EX31_RS14550 Trk system potassium transporter TrkH 0.54 EX31_RS12395 ribosome hibernation promoting factor low > 89
Escherichia coli BL21 0.24 ECD_01339 Rac prophage; potassium transporter subunit 0.51 ECD_03068 ribosome hibernation promoting factor HPF; stabilizes 100S dimers — —
Escherichia coli BW25113 0.24 b1363 trkG Rac prophage; potassium transporter subunit (NCBI) 0.51 b3203 yhbH predicted ribosome-associated, sigma 54 modulation protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF276 Potassium uptake protein TrkH 0.49 GFF2947 Ribosome hibernation protein YhbH 0.76 41
Escherichia coli ECOR38 0.24 HEPCGN_12860 trkH Trk system potassium transporter TrkH 0.51 HEPCGN_16810 Ribosome hibernation promoting factor low > 85
Escherichia coli ECRC102 0.24 NIAGMN_11985 trkH Trk system potassium transporter TrkH 0.51 NIAGMN_15695 Ribosome hibernation promoting factor — —
Escherichia coli ECRC62 0.24 BNILDI_05170 trkH Trk system potassium transporter TrkH 0.51 BNILDI_01800 Ribosome hibernation promoting factor — —
Escherichia coli ECRC101 0.24 OKFHMN_14230 trkH Trk system potassium transporter TrkH 0.51 OKFHMN_17935 Ribosome hibernation promoting factor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_04204 Trk system potassium uptake protein TrkH 0.51 OHPLBJKB_00497 Ribosome hibernation promoting factor low > 73
Escherichia coli ECOR27 0.24 NOLOHH_06360 trkH Trk system potassium transporter TrkH 0.51 NOLOHH_09735 Ribosome hibernation promoting factor low > 57
Escherichia coli ECRC101 0.24 MCAODC_04735 trkH Trk system potassium transporter TrkH 0.51 MCAODC_08455 Ribosome hibernation promoting factor — —
Escherichia coli ECRC99 0.24 KEDOAH_13920 trkH Trk system potassium transporter TrkH 0.51 KEDOAH_10215 Ribosome hibernation promoting factor — —
Escherichia coli ECRC98 0.24 JDDGAC_17855 trkH Trk system potassium transporter TrkH 0.51 JDDGAC_21560 Ribosome hibernation promoting factor — —
Klebsiella michiganensis M5al 0.24 BWI76_RS01385 potassium transporter 0.51 BWI76_RS25270 ribosome hibernation promoting factor low > 92
Escherichia fergusonii Becca 0.24 EFB2_04768 Trk system potassium uptake protein TrkH 0.51 EFB2_00620 Ribosome hibernation promoting factor low > 86
Escherichia coli Nissle 1917 0.24 ECOLIN_RS22195 Trk system potassium transporter TrkH 0.51 ECOLIN_RS18430 ribosome hibernation promoting factor — —

Not shown: 15 genomes with orthologs for Psest_1879 only; 22 genomes with orthologs for Psest_3314 only