Conservation of cofitness between Psest_3715 and Psest_3288 in Pseudomonas stutzeri RCH2

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3715 type IV pilus secretin (or competence protein) PilQ 1.0 Psest_3288 type IV-A pilus assembly ATPase PilB 0.90 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.76 Psyr_0798 type II secretion system protein E:General secretory system II, protein E, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.76 Psyr_0798 type II secretion system protein E:General secretory system II, protein E, N-terminal low > 86
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_12495 fimbrial protein 0.76 AO353_14330 general secretion pathway protein GspE low > 101
Pseudomonas sp. S08-1 0.73 OH686_10025 Type IV pilus biogenesis protein PilQ 0.82 OH686_16505 type IV-A pilus assembly ATPase PilB low > 80
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ 0.77 Pf1N1B4_2842 Type IV fimbrial assembly, ATPase PilB 0.24 38
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_09395 fimbrial protein 0.76 AO356_16015 general secretion pathway protein GspE low > 104
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ 0.76 Pf6N2E2_5142 Type IV fimbrial assembly, ATPase PilB low > 103
Pseudomonas sp. RS175 0.70 PFR28_05011 Type 3 secretion system secretin 0.76 PFR28_03731 Type II secretion system protein E low > 88
Marinobacter adhaerens HP15 0.47 HP15_478 type 4 fimbrial biogenesis protein PilQ 0.66 HP15_2409 ATPase, type IV, pilus assembly, PilB low > 73
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0762 type IV pilus secretin (or competence protein) PilQ 0.59 B158DRAFT_2138 type IV-A pilus assembly ATPase PilB 0.76 3
Acinetobacter radioresistens SK82 0.37 MPMX26_02812 Type 3 secretion system secretin 0.59 MPMX26_00246 hypothetical protein 0.91 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1333 Type IV pilus biogenesis protein PilQ 0.50 GFF1279 Type IV fimbrial assembly, ATPase PilB 0.80 6
Dechlorosoma suillum PS 0.34 Dsui_1191 type IV pilus secretin PilQ/competence protein 0.54 Dsui_1320 type IV-A pilus assembly ATPase PilB low > 51
Ralstonia solanacearum UW163 0.34 UW163_RS06670 type IV pilus secretin PilQ 0.44 UW163_RS07445 type IV-A pilus assembly ATPase PilB
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS06945 type IV pilus secretin PilQ 0.44 RALBFv3_RS06180 type IV-A pilus assembly ATPase PilB 0.34 66
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4703 Type IV pilus biogenesis protein PilQ 0.50 Ac3H11_4766 Type IV fimbrial assembly, ATPase PilB low > 79
Ralstonia solanacearum GMI1000 0.33 RS_RS14890 type IV pilus secretin PilQ 0.44 RS_RS14130 type IV-A pilus assembly ATPase PilB low > 80
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS19015 secretin 0.45 RR42_RS17980 general secretion pathway protein GspE low > 128
Ralstonia solanacearum PSI07 0.33 RPSI07_RS10290 type IV pilus secretin PilQ 0.45 RPSI07_RS11060 type IV-A pilus assembly ATPase PilB 0.80 7
Shewanella oneidensis MR-1 0.33 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) 0.60 SO0416 type IV pilus biogenesis protein PilB (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.33 ABID97_RS23265 type IV pilus secretin PilQ 0.53 ABID97_RS23430 type IV-A pilus assembly ATPase PilB 0.98 10
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ 0.45 ABZR87_RS01845 type IV-A pilus assembly ATPase PilB 0.97 13
Shewanella sp. ANA-3 0.33 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) 0.61 Shewana3_0419 type IV-A pilus assembly ATPase PilB (RefSeq) 0.49 13
Shewanella loihica PV-4 0.33 Shew_0212 type IV pilus secretin PilQ (RefSeq) 0.60 Shew_3438 type IV-A pilus assembly ATPase PilB (RefSeq) low > 60
Variovorax sp. SCN45 0.32 GFF5323 Type IV pilus biogenesis protein PilQ 0.52 GFF2510 Type IV fimbrial assembly, ATPase PilB 0.99 10
Shewanella amazonensis SB2B 0.32 Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) 0.60 Sama_0369 type IV pilus biogenesis protein PilB (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS11790 type IV pilus secretin PilQ 0.56 ABZR86_RS10040 type IV-A pilus assembly ATPase PilB 0.88 5
Rhodanobacter denitrificans MT42 0.32 LRK55_RS11580 type IV pilus secretin PilQ 0.55 LRK55_RS03715 type IV-A pilus assembly ATPase PilB 0.87 4
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS11855 type IV pilus secretin PilQ 0.54 LRK54_RS03945 type IV-A pilus assembly ATPase PilB 0.97 7
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_12040 pilQ type IV pilus secretin PilQ 0.54 OKGIIK_10820 pilB type IV-A pilus assembly ATPase PilB 0.52 24
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.1189.1 Type IV pilus biogenesis protein PilQ 0.54 Xcc-8004.1351.1 Type IV fimbrial assembly, ATPase PilB 0.32 52
Lysobacter sp. OAE881 0.26 ABIE51_RS17165 type IV pilus secretin PilQ family protein 0.54 ABIE51_RS04815 type IV-A pilus assembly ATPase PilB low > 62

Not shown: 2 genomes with orthologs for Psest_3715 only; 7 genomes with orthologs for Psest_3288 only