Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas stutzeri RCH2 | 1.0 | Psest_3715 | | type IV pilus secretin (or competence protein) PilQ | 1.0 | Psest_3288 | | type IV-A pilus assembly ATPase PilB | 0.90 | 4 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.74 | Psyr_0407 | | type II and III secretion system protein:NolW-like protein:NolW-like protein | 0.76 | Psyr_0798 | | type II secretion system protein E:General secretory system II, protein E, N-terminal | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.74 | Psyr_0407 | | type II and III secretion system protein:NolW-like protein:NolW-like protein | 0.76 | Psyr_0798 | | type II secretion system protein E:General secretory system II, protein E, N-terminal | low | > 86 |
Pseudomonas fluorescens FW300-N2E3 | 0.73 | AO353_12495 | | fimbrial protein | 0.76 | AO353_14330 | | general secretion pathway protein GspE | low | > 101 |
Pseudomonas sp. S08-1 | 0.73 | OH686_10025 | | Type IV pilus biogenesis protein PilQ | 0.82 | OH686_16505 | | type IV-A pilus assembly ATPase PilB | low | > 80 |
Pseudomonas fluorescens FW300-N1B4 | 0.73 | Pf1N1B4_1539 | | Type IV pilus biogenesis protein PilQ | 0.77 | Pf1N1B4_2842 | | Type IV fimbrial assembly, ATPase PilB | 0.24 | 38 |
Pseudomonas fluorescens FW300-N2C3 | 0.71 | AO356_09395 | | fimbrial protein | 0.76 | AO356_16015 | | general secretion pathway protein GspE | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.71 | Pf6N2E2_3756 | | Type IV pilus biogenesis protein PilQ | 0.76 | Pf6N2E2_5142 | | Type IV fimbrial assembly, ATPase PilB | low | > 103 |
Pseudomonas sp. RS175 | 0.70 | PFR28_05011 | | Type 3 secretion system secretin | 0.76 | PFR28_03731 | | Type II secretion system protein E | low | > 88 |
Marinobacter adhaerens HP15 | 0.47 | HP15_478 | | type 4 fimbrial biogenesis protein PilQ | 0.66 | HP15_2409 | | ATPase, type IV, pilus assembly, PilB | low | > 73 |
Kangiella aquimarina DSM 16071 | 0.38 | B158DRAFT_0762 | | type IV pilus secretin (or competence protein) PilQ | 0.59 | B158DRAFT_2138 | | type IV-A pilus assembly ATPase PilB | 0.76 | 3 |
Acinetobacter radioresistens SK82 | 0.37 | MPMX26_02812 | | Type 3 secretion system secretin | 0.59 | MPMX26_00246 | | hypothetical protein | 0.91 | 6 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.35 | GFF1333 | | Type IV pilus biogenesis protein PilQ | 0.50 | GFF1279 | | Type IV fimbrial assembly, ATPase PilB | 0.80 | 6 |
Dechlorosoma suillum PS | 0.34 | Dsui_1191 | | type IV pilus secretin PilQ/competence protein | 0.54 | Dsui_1320 | | type IV-A pilus assembly ATPase PilB | low | > 51 |
Ralstonia solanacearum UW163 | 0.34 | UW163_RS06670 | | type IV pilus secretin PilQ | 0.44 | UW163_RS07445 | | type IV-A pilus assembly ATPase PilB | — | — |
Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS06945 | | type IV pilus secretin PilQ | 0.44 | RALBFv3_RS06180 | | type IV-A pilus assembly ATPase PilB | 0.34 | 66 |
Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_4703 | | Type IV pilus biogenesis protein PilQ | 0.50 | Ac3H11_4766 | | Type IV fimbrial assembly, ATPase PilB | low | > 79 |
Ralstonia solanacearum GMI1000 | 0.33 | RS_RS14890 | | type IV pilus secretin PilQ | 0.44 | RS_RS14130 | | type IV-A pilus assembly ATPase PilB | low | > 80 |
Cupriavidus basilensis FW507-4G11 | 0.33 | RR42_RS19015 | | secretin | 0.45 | RR42_RS17980 | | general secretion pathway protein GspE | low | > 128 |
Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS10290 | | type IV pilus secretin PilQ | 0.45 | RPSI07_RS11060 | | type IV-A pilus assembly ATPase PilB | 0.80 | 7 |
Shewanella oneidensis MR-1 | 0.33 | SO0285 | | type IV pilus biogenesis protein PilQ (NCBI ptt file) | 0.60 | SO0416 | | type IV pilus biogenesis protein PilB (NCBI ptt file) | low | > 76 |
Variovorax sp. OAS795 | 0.33 | ABID97_RS23265 | | type IV pilus secretin PilQ | 0.53 | ABID97_RS23430 | | type IV-A pilus assembly ATPase PilB | 0.98 | 10 |
Ralstonia sp. UNC404CL21Col | 0.33 | ABZR87_RS02600 | | temperature dependent type IV pilus secretin PilQ | 0.45 | ABZR87_RS01845 | | type IV-A pilus assembly ATPase PilB | 0.97 | 13 |
Shewanella sp. ANA-3 | 0.33 | Shewana3_3895 | | type IV pilus secretin PilQ (RefSeq) | 0.61 | Shewana3_0419 | | type IV-A pilus assembly ATPase PilB (RefSeq) | 0.49 | 13 |
Shewanella loihica PV-4 | 0.33 | Shew_0212 | | type IV pilus secretin PilQ (RefSeq) | 0.60 | Shew_3438 | | type IV-A pilus assembly ATPase PilB (RefSeq) | low | > 60 |
Variovorax sp. SCN45 | 0.32 | GFF5323 | | Type IV pilus biogenesis protein PilQ | 0.52 | GFF2510 | | Type IV fimbrial assembly, ATPase PilB | 0.99 | 10 |
Shewanella amazonensis SB2B | 0.32 | Sama_3369 | | type IV pilus biogenesis protein PilQ (RefSeq) | 0.60 | Sama_0369 | | type IV pilus biogenesis protein PilB (RefSeq) | low | > 62 |
Dyella japonica UNC79MFTsu3.2 | 0.32 | ABZR86_RS11790 | | type IV pilus secretin PilQ | 0.56 | ABZR86_RS10040 | | type IV-A pilus assembly ATPase PilB | 0.88 | 5 |
Rhodanobacter denitrificans MT42 | 0.32 | LRK55_RS11580 | | type IV pilus secretin PilQ | 0.55 | LRK55_RS03715 | | type IV-A pilus assembly ATPase PilB | 0.87 | 4 |
Rhodanobacter denitrificans FW104-10B01 | 0.32 | LRK54_RS11855 | | type IV pilus secretin PilQ | 0.54 | LRK54_RS03945 | | type IV-A pilus assembly ATPase PilB | 0.97 | 7 |
Rhodanobacter sp. FW510-T8 | 0.32 | OKGIIK_12040 | pilQ | type IV pilus secretin PilQ | 0.54 | OKGIIK_10820 | pilB | type IV-A pilus assembly ATPase PilB | 0.52 | 24 |
Xanthomonas campestris pv. campestris strain 8004 | 0.27 | Xcc-8004.1189.1 | | Type IV pilus biogenesis protein PilQ | 0.54 | Xcc-8004.1351.1 | | Type IV fimbrial assembly, ATPase PilB | 0.32 | 52 |
Lysobacter sp. OAE881 | 0.26 | ABIE51_RS17165 | | type IV pilus secretin PilQ family protein | 0.54 | ABIE51_RS04815 | | type IV-A pilus assembly ATPase PilB | low | > 62 |
Not shown: 2 genomes with orthologs for Psest_3715 only; 7 genomes with orthologs for Psest_3288 only