| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0956 | | Transcriptional regulators | 1.0 | Psest_3100 | | RNA polymerase sigma factor RpoE | 0.44 | 1 |
| Pseudomonas fluorescens SBW25 | 0.79 | PFLU_RS25940 | | FCD domain-containing protein | 0.94 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.79 | PFLU_RS25940 | | FCD domain-containing protein | 0.94 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.78 | PfGW456L13_5113 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.94 | PfGW456L13_4516 | | RNA polymerase sigma-H factor AlgT | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.78 | Pf1N1B4_1185 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.94 | Pf1N1B4_3323 | | RNA polymerase sigma-H factor AlgT | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.78 | AO353_05695 | | transcriptional regulator PdhR | 0.94 | AO353_17625 | | RNA polymerase subunit sigma | low | > 101 |
| Pseudomonas sp. RS175 | 0.77 | PFR28_00064 | | Pyruvate dehydrogenase complex repressor | 0.94 | PFR28_00690 | | RNA polymerase sigma-H factor | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.77 | AO356_07545 | | transcriptional regulator PdhR | 0.94 | AO356_04575 | | RNA polymerase subunit sigma | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.77 | Pf6N2E2_3379 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.94 | Pf6N2E2_2756 | | RNA polymerase sigma-H factor AlgT | low | > 103 |
| Pseudomonas putida KT2440 | 0.75 | PP_4734 | | DNA-binding transcriptional dual regulator, LldR-L-lactate | 0.94 | PP_1427 | | RNA polymerase sigma E factor | low | > 96 |
| Pseudomonas sp. S08-1 | 0.75 | OH686_17020 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.94 | OH686_20045 | | RNA polymerase sigma factor RpoE | low | > 80 |
| Pseudomonas simiae WCS417 | 0.74 | PS417_24100 | | transcriptional regulator PdhR | 0.94 | PS417_07120 | | RNA polymerase sigma-H factor | low | > 88 |
| Escherichia coli ECRC62 | 0.41 | BNILDI_08755 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | BNILDI_11850 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC99 | 0.41 | KEDOAH_17645 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | KEDOAH_06845 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC98 | 0.41 | JDDGAC_14105 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | JDDGAC_25040 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC101 | 0.41 | MCAODC_01025 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | MCAODC_11905 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_3708 | | Transcriptional regulators | 0.66 | EX28DRAFT_0072 | | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECOR38 | 0.41 | HEPCGN_08490 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | HEPCGN_20520 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECOR27 | 0.41 | NOLOHH_02855 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | NOLOHH_13050 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli ECRC101 | 0.41 | OKFHMN_10510 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | OKFHMN_21375 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.41 | OHPLBJKB_03548 | | Pyruvate dehydrogenase complex repressor | 0.66 | OHPLBJKB_01134 | | ECF RNA polymerase sigma-E factor | — | — |
| Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS00635 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | ECOLIN_RS14560 | | RNA polymerase sigma factor RpoE | — | — |
| Escherichia fergusonii Becca | 0.41 | EFB2_03932 | | Pyruvate dehydrogenase complex repressor | 0.66 | EFB2_01323 | | ECF RNA polymerase sigma-E factor | — | — |
| Escherichia coli BW25113 | 0.41 | b0113 | pdhR | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | 0.66 | b2573 | rpoE | RNA polymerase, sigma 24 (sigma E) factor (NCBI) | — | — |
| Escherichia coli ECRC102 | 0.41 | NIAGMN_08360 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | NIAGMN_19145 | rpoE | RNA polymerase sigma factor RpoE | — | — |
| Escherichia coli BL21 | 0.41 | ECD_00112 | | pyruvate dehydrogenase complex repressor; autorepressor | 0.66 | ECD_02467 | | RNA polymerase sigma E factor | — | — |
| Enterobacter sp. TBS_079 | 0.41 | MPMX20_00806 | | Pyruvate dehydrogenase complex repressor | 0.66 | MPMX20_03444 | | ECF RNA polymerase sigma-E factor | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF123 | | Transcriptional repressor for pyruvate dehydrogenase complex | 0.65 | GFF2107 | | RNA polymerase sigma factor RpoE | — | — |
| Serratia liquefaciens MT49 | 0.41 | IAI46_21330 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | IAI46_19585 | | RNA polymerase sigma factor RpoE | — | — |
| Dickeya dianthicola ME23 | 0.40 | DZA65_RS19005 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.65 | DZA65_RS16930 | | RNA polymerase sigma factor RpoE | low | > 75 |
| Rahnella sp. WP5 | 0.40 | EX31_RS03485 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | EX31_RS21800 | | RNA polymerase sigma factor RpoE | — | — |
| Dickeya dadantii 3937 | 0.40 | DDA3937_RS17930 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | DDA3937_RS15765 | | RNA polymerase sigma factor RpoE | low | > 74 |
| Dickeya dianthicola 67-19 | 0.40 | HGI48_RS17855 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.65 | HGI48_RS15850 | | RNA polymerase sigma factor RpoE | low | > 71 |
| Klebsiella michiganensis M5al | 0.40 | BWI76_RS04875 | | transcriptional regulator PdhR | 0.65 | BWI76_RS21355 | | RNA polymerase sigma factor RpoE | — | — |
| Pantoea sp. MT58 | 0.40 | IAI47_15815 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | IAI47_04850 | | RNA polymerase sigma factor RpoE | — | — |
| Pectobacterium carotovorum WPP14 | 0.39 | HER17_RS03285 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | HER17_RS05780 | | RNA polymerase sigma factor RpoE | — | — |
| Shewanella amazonensis SB2B | 0.39 | Sama_0374 | pdhR | transcriptional regulator PdhR (RefSeq) | 0.65 | Sama_0874 | | RNA polymerase sigma factor RpoE (RefSeq) | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.39 | LU632_RS03075 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.66 | LU632_RS15425 | rpoE | RNA polymerase sigma factor RpoE | low | > 74 |
| Shewanella oneidensis MR-1 | 0.39 | SO0423 | pdhR | pyruvate dehydrogenase complex repressor (NCBI ptt file) | 0.72 | SO1342 | rpoE | RNA polymerase sigma-24 factor (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_0425 | pdhR | transcriptional regulator PdhR (RefSeq) | 0.71 | Shewana3_3032 | | RNA polymerase sigma factor RpoE (RefSeq) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.38 | CSW01_12225 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.67 | CSW01_12485 | | RNA polymerase sigma factor RpoE | — | — |
| Shewanella loihica PV-4 | 0.38 | Shew_3432 | pdhR | transcriptional regulator PdhR (RefSeq) | 0.70 | Shew_1048 | | RNA polymerase sigma factor RpoE (RefSeq) | low | > 60 |
| Magnetospirillum magneticum AMB-1 | 0.38 | AMB_RS01210 | | FCD domain-containing protein | 0.18 | AMB_RS09285 | | RNA polymerase sigma factor | — | — |
| Alteromonas macleodii MIT1002 | 0.36 | MIT1002_03004 | | Pyruvate dehydrogenase complex repressor | 0.71 | MIT1002_02719 | | Sigma-24 | — | — |
| Castellaniella sp019104865 MT123 | 0.34 | ABCV34_RS10290 | | transcriptional regulator LldR | 0.58 | ABCV34_RS08355 | | RNA polymerase sigma factor RpoE | low | > 48 |
| Paraburkholderia sabiae LMG 24235 | 0.32 | QEN71_RS10135 | | FadR/GntR family transcriptional regulator | 0.60 | QEN71_RS04575 | | RNA polymerase sigma factor RpoE | low | > 153 |
| Agrobacterium fabrum C58 | 0.32 | Atu0662 | | transcriptional regulator, GntR family | 0.19 | Atu3084 | | RNA polymerase sigma factor | low | > 89 |
| Cupriavidus basilensis FW507-4G11 | 0.32 | RR42_RS21300 | | GntR family transcriptional regulator | 0.62 | RR42_RS14080 | | RNA polymerase sigma factor RpoE | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.30 | BPHYT_RS26990 | | GntR family transcriptional regulator | 0.61 | BPHYT_RS14405 | | RNA polymerase sigma factor RpoE | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.29 | H281DRAFT_02906 | | transcriptional regulator, GntR family | 0.60 | H281DRAFT_04355 | | RNA polymerase, sigma-24 subunit, RpoE | — | — |
| Paraburkholderia graminis OAS925 | 0.28 | ABIE53_005884 | | GntR family transcriptional repressor for pyruvate dehydrogenase complex | 0.61 | ABIE53_003043 | | RNA polymerase sigma-70 factor (ECF subfamily) | low | > 113 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.18 | GFF5464 | | Transcriptional regulator, GntR family | 0.49 | GFF3339 | | RNA polymerase sigma factor RpoE | low | > 90 |
| Variovorax sp. OAS795 | 0.17 | ABID97_RS05820 | | FadR/GntR family transcriptional regulator | 0.49 | ABID97_RS08330 | | RNA polymerase sigma factor RpoE | low | > 91 |
| Bifidobacterium breve UCC2003 | 0.16 | BBR_RS11160 | | FadR family transcriptional regulator | 0.21 | BBR_RS15930 | | RNA polymerase sigma factor | low | > 34 |
Not shown: 13 genomes with orthologs for Psest_0956 only; 29 genomes with orthologs for Psest_3100 only