| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF2125 | | Ribosomal protein L11 methyltransferase (EC 2.1.1.-) | 1.0 | GFF3007 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | 0.55 | 15 |
| Escherichia coli ECOR38 | 0.89 | HEPCGN_16510 | prmA | 50S ribosomal protein L11 methyltransferase | 0.90 | HEPCGN_18805 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Escherichia coli BW25113 | 0.89 | b3259 | prmA | ribosomal protein L11 methyltransferase (NCBI) | 0.90 | b2906 | visC | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.89 | JDDGAC_21315 | prmA | 50S ribosomal protein L11 methyltransferase | 0.90 | JDDGAC_23155 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Escherichia coli ECRC99 | 0.89 | KEDOAH_10460 | prmA | 50S ribosomal protein L11 methyltransferase | 0.90 | KEDOAH_08625 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Enterobacter asburiae PDN3 | 0.89 | EX28DRAFT_3311 | | ribosomal protein L11 methyltransferase | 0.88 | EX28DRAFT_2958 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.89 | OHPLBJKB_00446 | | Ribosomal protein L11 methyltransferase | 0.90 | OHPLBJKB_00809 | | 2-octaprenylphenol hydroxylase | low | > 73 |
| Escherichia coli BL21 | 0.89 | ECD_03117 | | methyltransferase for 50S ribosomal subunit protein L11 | 0.90 | ECD_02738 | | 2-octaprenylphenol hydroxylase, FAD-dependent | low | > 60 |
| Escherichia coli ECRC102 | 0.89 | NIAGMN_15450 | prmA | 50S ribosomal protein L11 methyltransferase | 0.90 | NIAGMN_17280 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Escherichia coli ECRC101 | 0.89 | MCAODC_08210 | prmA | 50S ribosomal protein L11 methyltransferase | 0.90 | MCAODC_10035 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Escherichia coli ECRC62 | 0.89 | BNILDI_02045 | prmA | 50S ribosomal protein L11 methyltransferase | 0.90 | BNILDI_09960 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Escherichia coli ECRC101 | 0.89 | OKFHMN_17690 | prmA | 50S ribosomal protein L11 methyltransferase | 0.90 | OKFHMN_19515 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Escherichia coli Nissle 1917 | 0.89 | ECOLIN_RS18720 | | 50S ribosomal protein L11 methyltransferase | 0.90 | ECOLIN_RS16180 | | FAD-dependent 2-octaprenylphenol hydroxylase | low | > 52 |
| Escherichia fergusonii Becca | 0.89 | EFB2_00565 | | Ribosomal protein L11 methyltransferase | 0.91 | EFB2_00996 | | 2-octaprenylphenol hydroxylase | low | > 86 |
| Escherichia coli ECOR27 | 0.88 | NOLOHH_09475 | prmA | 50S ribosomal protein L11 methyltransferase | 0.90 | NOLOHH_11425 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Serratia liquefaciens MT49 | 0.88 | IAI46_22770 | | 50S ribosomal protein L11 methyltransferase | 0.72 | IAI46_20865 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Dickeya dianthicola ME23 | 0.88 | DZA65_RS01360 | | 50S ribosomal protein L11 methyltransferase | 0.68 | DZA65_RS02445 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Klebsiella michiganensis M5al | 0.88 | BWI76_RS25555 | | 50S ribosomal protein L11 methyltransferase | 0.88 | BWI76_RS23885 | | 2-octaprenylphenol hydroxylase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.88 | MPMX20_04167 | | Ribosomal protein L11 methyltransferase | 0.88 | MPMX20_03765 | | 2-octaprenylphenol hydroxylase | — | — |
| Dickeya dianthicola 67-19 | 0.87 | HGI48_RS01300 | | 50S ribosomal protein L11 methyltransferase | 0.67 | HGI48_RS02340 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Dickeya dadantii 3937 | 0.87 | DDA3937_RS01380 | | 50S ribosomal protein L11 methyltransferase | 0.69 | DDA3937_RS02385 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Rahnella sp. WP5 | 0.86 | EX31_RS12190 | | 50S ribosomal protein L11 methyltransferase | 0.75 | EX31_RS21505 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Pantoea sp. MT58 | 0.86 | IAI47_02390 | | 50S ribosomal protein L11 methyltransferase | 0.78 | IAI47_03760 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Pectobacterium carotovorum WPP14 | 0.85 | HER17_RS20225 | | 50S ribosomal protein L11 methyltransferase | 0.71 | HER17_RS19125 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Erwinia tracheiphila SCR3 | 0.81 | LU632_RS21500 | prmA | 50S ribosomal protein L11 methyltransferase | 0.74 | LU632_RS05890 | ubiI | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.73 | CSW01_01500 | | 50S ribosomal protein L11 methyltransferase | 0.54 | CSW01_12520 | | FAD-dependent 2-octaprenylphenol hydroxylase | — | — |
| Shewanella sp. ANA-3 | 0.68 | Shewana3_0400 | prmA | ribosomal protein L11 methyltransferase (RefSeq) | 0.51 | Shewana3_3502 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.67 | SO0395 | prmA | ribosomal protein L11 methyltransferase (NCBI ptt file) | 0.51 | SO0778 | | oxidoreductase, FAD-binding, UbiH/Coq6 family (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.65 | Shew_0331 | prmA | ribosomal protein L11 methyltransferase (RefSeq) | 0.51 | Shew_3065 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.63 | Sama_3224 | prmA | ribosomal protein L11 methyltransferase (RefSeq) | 0.50 | Sama_2722 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_03956 | | Ribosomal protein L11 methyltransferase | 0.42 | MIT1002_02982 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas stutzeri RCH2 | 0.55 | Psest_1018 | | ribosomal protein L11 methyltransferase | 0.35 | Psest_0178 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Pseudomonas putida KT2440 | 0.54 | PP_4818 | | ribosomal protein L11 methyltransferase | 0.36 | PP_5197 | | putative oxidoreductase involved in anerobic synthesis of ubiquinone, FAD/NAD(P)-binding domain | — | — |
| Pseudomonas sp. S08-1 | 0.53 | OH686_07600 | | ribosomal protein L11 methyltransferase | 0.37 | OH686_11190 | | 2-polyprenylphenol hydroxylase | — | — |
| Kangiella aquimarina DSM 16071 | 0.52 | B158DRAFT_0162 | | ribosomal protein L11 methyltransferase | 0.38 | B158DRAFT_0537 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.52 | AO356_08205 | | ribosomal protein L11 methyltransferase | 0.37 | AO356_13020 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_1310 | | Ribosomal protein L11 methyltransferase (EC 2.1.1.-) | 0.38 | Pf1N1B4_2231 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_4402 | | [LSU ribosomal protein L11P]-lysine N-methyltransferase | 0.38 | Psyr_0323 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_3514 | | Ribosomal protein L11 methyltransferase (EC 2.1.1.-) | 0.37 | Pf6N2E2_4482 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_4402 | | [LSU ribosomal protein L11P]-lysine N-methyltransferase | 0.38 | Psyr_0323 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_53 | | Ribosomal protein L11 methyltransferase (EC 2.1.1.-) | 0.37 | PfGW456L13_899 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Pseudomonas simiae WCS417 | 0.51 | PS417_02960 | | ribosomal protein L11 methyltransferase | 0.38 | PS417_27270 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas fluorescens SBW25 | 0.51 | PFLU_RS03035 | | 50S ribosomal protein L11 methyltransferase | 0.38 | PFLU_RS28930 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_13670 | | ribosomal protein L11 methyltransferase | 0.37 | AO353_08750 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.51 | PFLU_RS03035 | | 50S ribosomal protein L11 methyltransferase | 0.38 | PFLU_RS28930 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas sp. RS175 | 0.50 | PFR28_05218 | | Ribosomal protein L11 methyltransferase | 0.37 | PFR28_04319 | | 2-octaprenylphenol hydroxylase | — | — |
| Acinetobacter radioresistens SK82 | 0.42 | MPMX26_01144 | | Ribosomal protein L11 methyltransferase | 0.23 | MPMX26_02284 | | 2-octaprenylphenol hydroxylase | — | — |
| Lysobacter sp. OAE881 | 0.38 | ABIE51_RS17745 | | 50S ribosomal protein L11 methyltransferase | 0.25 | ABIE51_RS05430 | | FAD-dependent oxidoreductase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.38 | H281DRAFT_06282 | | [LSU ribosomal protein L11P]-lysine N-methyltransferase | 0.23 | H281DRAFT_05706 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.38 | QEN71_RS27175 | | 50S ribosomal protein L11 methyltransferase | 0.23 | QEN71_RS27595 | | UbiH/UbiF family hydroxylase | — | — |
| Dechlorosoma suillum PS | 0.34 | Dsui_0390 | | ribosomal protein L11 methyltransferase | 0.25 | Dsui_1092 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS10670 | | 50S ribosomal protein L11 methyltransferase | 0.16 | ABCV34_RS10260 | | FAD-dependent monooxygenase | — | — |
| Variovorax sp. SCN45 | 0.30 | GFF4440 | | Ribosomal protein L11 methyltransferase | 0.16 | GFF2133 | | 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.29 | GFF588 | | Ribosomal protein L11 methyltransferase (EC 2.1.1.-) | 0.17 | GFF625 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Variovorax sp. OAS795 | 0.29 | ABID97_RS06380 | | 50S ribosomal protein L11 methyltransferase | 0.17 | ABID97_RS24790 | | FAD-dependent monooxygenase | — | — |
| Acidovorax sp. GW101-3H11 | 0.28 | Ac3H11_4027 | | Ribosomal protein L11 methyltransferase (EC 2.1.1.-) | 0.17 | Ac3H11_4879 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | low | > 79 |
Not shown: 16 genomes with orthologs for GFF2125 only; 2 genomes with orthologs for GFF3007 only