Conservation of cofitness between HP15_3225 and HP15_2188 in Marinobacter adhaerens HP15

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_3225 tRNA-dihydrouridine synthase B 1.0 HP15_2188 malate synthase G 0.53 14
Pseudomonas stutzeri RCH2 0.69 Psest_1016 putative TIM-barrel protein, nifR3 family 0.70 Psest_0354 Malate synthase G (EC 2.3.3.9) (from data) low > 67
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_3517 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.70 Pf6N2E2_4752 Malate synthase G (EC 2.3.3.9) low > 103
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_08215 tRNA-dihydrouridine synthase B 0.70 AO356_14100 malate synthase G low > 104
Pseudomonas sp. S08-1 0.68 OH686_07610 tRNA-dihydrouridine synthase DusB 0.72 OH686_10405 malate synthase G low > 80
Pseudomonas sp. RS175 0.68 PFR28_05216 tRNA-dihydrouridine synthase B 0.71 PFR28_04110 Malate synthase G low > 88
Pseudomonas putida KT2440 0.67 PP_4820 tRNA-dihydrouridine synthase B 0.70 PP_0356 malate synthase G low > 96
Pseudomonas fluorescens SBW25 0.67 PFLU_RS03025 tRNA dihydrouridine synthase DusB 0.70 PFLU_RS27685 malate synthase G low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_4404 tRNA-U20-dihydrouridine synthase 0.69 Psyr_4700 malate synthase low > 86
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS03025 tRNA dihydrouridine synthase DusB 0.70 PFLU_RS27685 malate synthase G low > 109
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_4404 tRNA-U20-dihydrouridine synthase 0.69 Psyr_4700 malate synthase low > 86
Pseudomonas simiae WCS417 0.67 PS417_02950 tRNA-dihydrouridine synthase B 0.70 PS417_26040 malate synthase low > 88
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_1313 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.71 Pf1N1B4_2478 Malate synthase G (EC 2.3.3.9) low > 87
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_55 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.71 PfGW456L13_1139 Malate synthase G (EC 2.3.3.9) low > 87
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_13660 tRNA-dihydrouridine synthase B 0.71 AO353_07560 malate synthase G low > 101
Alteromonas macleodii MIT1002 0.63 MIT1002_03957 putative tRNA-dihydrouridine synthase 0.62 MIT1002_02833 Malate synthase G low > 70
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS26770 tRNA dihydrouridine synthase DusB 0.64 QEN71_RS31820 malate synthase G low > 153
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04249 tRNA-U20-dihydrouridine synthase 0.63 H281DRAFT_00963 malate synthase low > 103
Variovorax sp. OAS795 0.58 ABID97_RS24735 tRNA dihydrouridine synthase DusB 0.62 ABID97_RS04710 malate synthase G low > 91
Variovorax sp. SCN45 0.58 GFF2144 tRNA-dihydrouridine synthase DusB 0.63 GFF6305 Malate synthase G (EC 2.3.3.9) low > 127
Paraburkholderia graminis OAS925 0.57 ABIE53_003489 tRNA-dihydrouridine synthase B 0.63 ABIE53_002201 malate synthase low > 113
Escherichia coli BW25113 0.57 b3260 dusB tRNA-dihydrouridine synthase B (NCBI) 0.60 b2976 glcB malate synthase (NCBI) low > 76
Escherichia coli ECOR38 0.57 HEPCGN_16505 dusB tRNA dihydrouridine synthase DusB 0.60 HEPCGN_18015 glcB malate synthase G low > 85
Escherichia coli ECOR27 0.57 NOLOHH_09470 dusB tRNA dihydrouridine synthase DusB 0.59 NOLOHH_10940 glcB malate synthase G low > 57
Escherichia fergusonii Becca 0.57 EFB2_00564 tRNA-dihydrouridine synthase B 0.59 EFB2_00839 Malate synthase G low > 86
Escherichia coli Nissle 1917 0.57 ECOLIN_RS18725 tRNA dihydrouridine synthase DusB 0.59 ECOLIN_RS17120 malate synthase G low > 52
Escherichia coli BL21 0.57 ECD_03118 tRNA-dihydrouridine synthase B 0.60 ECD_02844 malate synthase G low > 60
Escherichia coli ECRC62 0.57 BNILDI_02050 dusB tRNA dihydrouridine synthase DusB 0.59 BNILDI_00575 glcB malate synthase G — —
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS16585 tRNA-dihydrouridine synthase B 0.64 BPHYT_RS31665 malate synthase — —
Castellaniella sp019104865 MT123 0.55 ABCV34_RS07960 tRNA dihydrouridine synthase DusB 0.64 ABCV34_RS12110 malate synthase G low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF634 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.61 GFF3040 Malate synthase G (EC 2.3.3.9) low > 90
Acinetobacter radioresistens SK82 0.53 MPMX26_02127 tRNA-dihydrouridine synthase B 0.60 MPMX26_01247 Malate synthase G low > 36
Acidovorax sp. GW101-3H11 0.53 Ac3H11_3996 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.64 Ac3H11_4835 Malate synthase G (EC 2.3.3.9) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00445 putative tRNA-dihydrouridine synthase 0.60 OHPLBJKB_00731 Malate synthase G low > 73
Azospirillum sp. SherDot2 0.43 MPMX19_01110 tRNA-dihydrouridine synthase B 0.68 MPMX19_04824 Malate synthase G low > 112
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0140 tRNA-U20-dihydrouridine synthase 0.55 Ga0059261_2979 malate synthase (EC 2.3.3.9) low > 68
Agrobacterium fabrum C58 0.38 Atu1444 nitrogen regulation protein 0.67 Atu0047 malate synthase G low > 89
Sinorhizobium meliloti 1021 0.37 SMc01041 NIFR3-like protein 0.69 SMc02581 malate synthase G low > 103
Rhizobium sp. OAE497 0.37 ABIE40_RS09080 tRNA dihydrouridine synthase DusB 0.68 ABIE40_RS19490 malate synthase G low > 107
Phaeobacter inhibens DSM 17395 0.37 PGA1_c14770 tRNA-dihydrouridine synthase DusB 0.59 PGA1_c09900 malate synthase GlcB low > 62
Rhodopseudomonas palustris CGA009 0.35 TX73_013410 tRNA dihydrouridine synthase DusB 0.61 TX73_021855 malate synthase G — —
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS04810 tRNA dihydrouridine synthase DusB 0.59 A4249_RS15290 malate synthase G low > 48
Dinoroseobacter shibae DFL-12 0.34 Dshi_1576 putative TIM-barrel protein, nifR3 family (RefSeq) 0.60 Dshi_1227 malate synthase G (RefSeq) low > 64
Mycobacterium tuberculosis H37Rv 0.28 Rv0823c Possible transcriptional regulatory protein 0.63 Rv1837c Malate synthase G GlcB — —
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU0661 dihydrouridine synthase family protein (TIGR) 0.59 DVU0701 glcB malate synthase G (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_2019 dihydrouridine synthase DuS (RefSeq) 0.63 DvMF_2183 malate synthase G (RefSeq) low > 51

Not shown: 52 genomes with orthologs for HP15_3225 only; 0 genomes with orthologs for HP15_2188 only