Conservation of cofitness between PS417_01290 and PS417_06485 in Pseudomonas simiae WCS417

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_01290 ADP-ribose diphosphatase 1.0 PS417_06485 hypothetical protein 0.21 20
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS01385 ADP compounds hydrolase NudE 0.98 PFLU_RS06515 YchJ family protein low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS01385 ADP compounds hydrolase NudE 0.98 PFLU_RS06515 YchJ family protein low > 109
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_404 ADP compounds hydrolase NudE (EC 3.6.1.-) 0.90 PfGW456L13_4631 UPF0225 protein YchJ low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_11845 ADP-ribose diphosphatase 0.92 AO353_16995 hypothetical protein low > 101
Pseudomonas putida KT2440 0.90 PP_0260 ADP-sugar pyrophosphorylase 0.84 PP_1119 conserved protein of unknown function low > 96
Pseudomonas sp. RS175 0.90 PFR28_04886 ADP compounds hydrolase NudE 0.86 PFR28_00514 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_3886 ADP compounds hydrolase NudE (EC 3.6.1.-) 0.87 Pf6N2E2_2949 UPF0225 protein YchJ low > 103
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_10080 ADP-ribose diphosphatase 0.86 AO356_05460 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_1669 ADP compounds hydrolase NudE (EC 3.6.1.-) 0.89 Pf1N1B4_3187 UPF0225 protein YchJ low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_4941 NUDIX hydrolase 0.84 Psyr_3863 SEC-C motif protein low > 86
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_4941 NUDIX hydrolase 0.84 Psyr_3863 SEC-C motif protein low > 86
Pseudomonas sp. S08-1 0.83 OH686_14310 ADP compounds hydrolase NudE 0.80 OH686_04855 UPF0225 protein YchJ low > 80
Pseudomonas stutzeri RCH2 0.80 Psest_3961 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.74 Psest_2861 Uncharacterized protein conserved in bacteria low > 67
Shewanella sp. ANA-3 0.51 Shewana3_0169 nudE ADP-ribose diphosphatase NudE (RefSeq) 0.26 Shewana3_2159 SecC motif-containing protein (RefSeq) low > 73
Enterobacter asburiae PDN3 0.50 EX28DRAFT_4145 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.36 EX28DRAFT_0859 Uncharacterized protein conserved in bacteria low > 76
Escherichia coli ECOR38 0.49 HEPCGN_15895 nudE ADP compounds hydrolase NudE 0.32 HEPCGN_25035 ychJ YchJ family protein low > 85
Shewanella loihica PV-4 0.49 Shew_0129 nudE ADP-ribose diphosphatase NudE (RefSeq) 0.30 Shew_2056 SecC motif-containing protein (RefSeq) — —
Klebsiella michiganensis M5al 0.49 BWI76_RS26130 ADP compounds hydrolase NudE 0.37 BWI76_RS17285 hypothetical protein low > 92
Enterobacter sp. TBS_079 0.49 MPMX20_04285 ADP compounds hydrolase NudE 0.36 MPMX20_02595 hypothetical protein low > 85
Escherichia coli ECRC101 0.49 OKFHMN_17075 nudE ADP compounds hydrolase NudE 0.32 OKFHMN_28575 ychJ YchJ family protein — —
Escherichia coli ECRC99 0.49 KEDOAH_11065 nudE ADP compounds hydrolase NudE 0.32 KEDOAH_25570 ychJ YchJ family protein — —
Escherichia coli ECRC98 0.49 JDDGAC_20705 nudE ADP compounds hydrolase NudE 0.32 JDDGAC_06000 ychJ YchJ family protein — —
Escherichia coli ECRC101 0.49 MCAODC_07605 nudE ADP compounds hydrolase NudE 0.32 MCAODC_21685 ychJ YchJ family protein — —
Escherichia coli ECRC102 0.49 NIAGMN_14845 nudE ADP compounds hydrolase NudE 0.32 NIAGMN_27660 ychJ YchJ family protein — —
Shewanella amazonensis SB2B 0.49 Sama_0183 nudE ADP-ribose diphosphatase NudE (RefSeq) 0.27 Sama_1820 metal-binding protein (RefSeq) low > 62
Escherichia coli BW25113 0.49 b3397 nudE ADP-ribose diphosphatase (NCBI) 0.32 b1233 ychJ hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 0.49 BNILDI_02655 nudE ADP compounds hydrolase NudE 0.32 BNILDI_18630 ychJ YchJ family protein — —
Escherichia coli ECOR27 0.49 NOLOHH_08865 nudE ADP compounds hydrolase NudE 0.32 NOLOHH_20475 ychJ YchJ family protein low > 57
Escherichia coli BL21 0.49 ECD_03249 adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP-ribose/NADH hydrolase 0.32 ECD_01209 UPF0225 family protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00306 ADP compounds hydrolase NudE 0.32 OHPLBJKB_02452 hypothetical protein low > 73
Escherichia fergusonii Becca 0.49 EFB2_00431 ADP compounds hydrolase NudE 0.32 EFB2_02693 hypothetical protein low > 86
Shewanella oneidensis MR-1 0.49 SO0190 MutT/nudix family protein (NCBI ptt file) 0.24 SO2497 conserved hypothetical protein (NCBI ptt file) low > 76
Escherichia coli Nissle 1917 0.49 ECOLIN_RS19400 ADP compounds hydrolase NudE 0.32 ECOLIN_RS07465 YchJ family protein — —
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_0701 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.28 B158DRAFT_1196 Uncharacterized protein conserved in bacteria low > 40
Rahnella sp. WP5 0.46 EX31_RS04755 ADP compounds hydrolase NudE 0.30 EX31_RS10110 YchJ family protein low > 89
Serratia liquefaciens MT49 0.45 IAI46_23745 ADP compounds hydrolase NudE 0.34 IAI46_14260 YchJ family protein low > 86
Pectobacterium carotovorum WPP14 0.45 HER17_RS01735 ADP compounds hydrolase NudE 0.34 HER17_RS11060 YchJ family protein 0.82 2
Dickeya dadantii 3937 0.45 DDA3937_RS19585 ADP compounds hydrolase NudE 0.30 DDA3937_RS10330 YchJ family protein low > 74
Alteromonas macleodii MIT1002 0.45 MIT1002_03992 ADP compounds hydrolase NudE 0.21 MIT1002_02313 SEC-C motif low > 70
Dickeya dianthicola ME23 0.45 DZA65_RS20800 ADP compounds hydrolase NudE 0.31 DZA65_RS10815 YchJ family protein low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS19715 ADP compounds hydrolase NudE 0.31 HGI48_RS10340 YchJ family protein 0.37 49
Rhodanobacter denitrificans MT42 0.44 LRK55_RS03905 ADP compounds hydrolase NudE 0.26 LRK55_RS10685 YchJ family metal-binding protein low > 63
Pantoea sp. MT58 0.44 IAI47_01855 ADP compounds hydrolase NudE 0.32 IAI47_09015 YchJ family protein low > 76
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS04135 ADP compounds hydrolase NudE 0.26 LRK54_RS10980 hypothetical protein low > 59
Erwinia tracheiphila SCR3 0.43 LU632_RS22910 nudE ADP compounds hydrolase NudE 0.35 LU632_RS12935 YchJ family protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_13730 ADP compounds hydrolase NudE 0.31 CSW01_09275 hypothetical protein low > 62
Lysobacter sp. OAE881 0.42 ABIE51_RS05270 ADP compounds hydrolase NudE 0.23 ABIE51_RS00530 YchJ family protein low > 62
Dechlorosoma suillum PS 0.20 Dsui_3036 Zn-finger containing NTP pyrophosphohydrolase 0.28 Dsui_2325 hypothetical protein low > 51
Burkholderia phytofirmans PsJN 0.15 BPHYT_RS06700 ADP-ribose pyrophosphatase 0.23 BPHYT_RS02215 hypothetical protein — —
Variovorax sp. SCN45 0.15 GFF4765 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.22 GFF1999 GTG start codon — —
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS24075 NUDIX hydrolase 0.21 QEN71_RS01110 YchJ family protein low > 153
Ralstonia solanacearum PSI07 0.15 RPSI07_RS14410 NUDIX hydrolase 0.23 RPSI07_RS22830 hypothetical protein low > 81
Variovorax sp. OAS795 0.14 ABID97_RS20420 NUDIX hydrolase 0.25 ABID97_RS25230 YchJ family metal-binding protein low > 91

Not shown: 8 genomes with orthologs for PS417_01290 only; 11 genomes with orthologs for PS417_06485 only