Conservation of cofitness between Psest_2018 and Psest_1259 in Pseudomonas stutzeri RCH2

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2018 Uncharacterized conserved protein 1.0 Psest_1259 23S rRNA m2A2503 methyltransferase 0.32 9
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_27720 cupin 0.87 AO353_15875 23S rRNA (adenine(2503)-C2)-methyltransferase 0.51 21
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_22095 cupin 0.87 AO356_06605 23S rRNA (adenine(2503)-C2)-methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_283 FIG002776: hypothetical protein 0.87 Pf6N2E2_3181 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) — —
Pseudomonas sp. RS175 0.83 PFR28_02622 50S ribosomal protein L16 3-hydroxylase 0.88 PFR28_00294 Dual-specificity RNA methyltransferase RlmN — —
Pseudomonas fluorescens SBW25 0.83 PFLU_RS18595 cupin domain-containing protein 0.87 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_3193 Transcription factor jumonji, jmjC 0.89 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase 0.46 79
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_3193 Transcription factor jumonji, jmjC 0.89 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase low > 86
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS18595 cupin domain-containing protein 0.87 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Pseudomonas sp. S08-1 0.83 OH686_00190 hypothetical protein 0.87 OH686_17515 23S rRNA (adenine(2503)-C(2))-methyltransferase — —
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_2636 FIG002776: hypothetical protein 0.87 PfGW456L13_4865 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 87
Pseudomonas simiae WCS417 0.82 PS417_16555 cupin 0.86 PS417_23160 50S rRNA methyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_4045 FIG002776: hypothetical protein 0.87 Pf1N1B4_857 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) — —
Pseudomonas putida KT2440 0.78 PP_4017 conserved protein of unknown function 0.84 PP_0850 Dual-specificity RNA methyltransferase RlmN — —
Marinobacter adhaerens HP15 0.46 HP15_2089 cupin 4 family protein 0.69 HP15_1490 conserved hypothetical protein — —
Lysobacter sp. OAE881 0.40 ABIE51_RS09000 cupin domain-containing protein 0.56 ABIE51_RS09415 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 62
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS05910 cupin domain-containing protein 0.53 ABZR86_RS05455 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 74
Rhodanobacter denitrificans MT42 0.38 LRK55_RS00715 cupin domain-containing protein 0.54 LRK55_RS18065 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 63
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS00940 cupin domain-containing protein 0.54 LRK54_RS00070 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.40 22
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05950 roxA transcription factor 0.54 OKGIIK_07140 rlmN 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 52
Acinetobacter radioresistens SK82 0.34 MPMX26_01736 putative ribosomal oxygenase 0.59 MPMX26_00426 Dual-specificity RNA methyltransferase RlmN low > 36
Enterobacter asburiae PDN3 0.33 EX28DRAFT_1802 Uncharacterized conserved protein 0.55 EX28DRAFT_0126 23S rRNA (adenine(2503)-C(2))-methyltransferase low > 76
Escherichia coli ECRC62 0.32 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.55 BNILDI_12160 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli BW25113 0.32 b1128 ycfD orf, hypothetical protein (VIMSS) 0.55 b2517 yfgB predicted enzyme (NCBI) 0.24 26
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.55 OHPLBJKB_01192 Dual-specificity RNA methyltransferase RlmN low > 73
Escherichia coli BL21 0.32 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.55 ECD_02409 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent low > 60
Escherichia coli Nissle 1917 0.32 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.55 ECOLIN_RS14300 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia fergusonii Becca 0.32 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.55 EFB2_01373 Dual-specificity RNA methyltransferase RlmN low > 86
Escherichia coli ECOR38 0.32 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.55 HEPCGN_20830 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 85
Escherichia coli ECOR27 0.32 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.55 NOLOHH_13360 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 57
Enterobacter sp. TBS_079 0.32 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.55 MPMX20_03395 Dual-specificity RNA methyltransferase RlmN low > 85
Escherichia coli ECRC102 0.32 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.55 NIAGMN_19480 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECRC99 0.32 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.55 KEDOAH_06510 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECRC101 0.32 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.55 OKFHMN_21710 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECRC101 0.32 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.55 MCAODC_12240 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECRC98 0.32 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.55 JDDGAC_25385 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF3413 FIG002776: hypothetical protein 0.55 GFF2414 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 78
Klebsiella michiganensis M5al 0.31 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.55 BWI76_RS21095 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS06270 cupin 0.56 RR42_RS13155 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN — —
Pectobacterium carotovorum WPP14 0.31 HER17_RS19385 cupin domain-containing protein 0.54 HER17_RS06085 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 75
Dickeya dadantii 3937 0.31 DDA3937_RS11510 cupin domain-containing protein 0.54 DDA3937_RS15480 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 74
Erwinia tracheiphila SCR3 0.31 LU632_RS14600 cupin domain-containing protein 0.55 LU632_RS17815 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 74
Shewanella oneidensis MR-1 0.31 SO2636 conserved hypothetical protein (NCBI ptt file) 0.53 SO3315 conserved hypothetical protein TIGR00048 (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.31 IAI46_10385 cupin domain-containing protein 0.55 IAI46_19290 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 86
Dickeya dianthicola 67-19 0.31 HGI48_RS14985 cupin domain-containing protein 0.54 HGI48_RS15590 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 71
Rahnella sp. WP5 0.31 EX31_RS23850 cupin domain-containing protein 0.56 EX31_RS20525 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 89
Dickeya dianthicola ME23 0.31 DZA65_RS15735 cupin domain-containing protein 0.54 DZA65_RS16665 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 75
Shewanella loihica PV-4 0.30 Shew_1557 cupin 4 family protein (RefSeq) 0.52 Shew_1287 hypothetical protein (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_2496 Uncharacterized conserved protein 0.56 B158DRAFT_1149 23S rRNA m2A2503 methyltransferase low > 40
Pantoea sp. MT58 0.30 IAI47_11940 cupin domain-containing protein 0.54 IAI47_05040 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 76
Shewanella sp. ANA-3 0.29 Shewana3_1744 cupin 4 family protein (RefSeq) 0.53 Shewana3_1226 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.27 Sama_2065 cupin 4 (RefSeq) 0.53 Sama_2368 hypothetical protein (RefSeq) 0.37 46
Alteromonas macleodii MIT1002 0.25 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase 0.51 MIT1002_02791 Dual-specificity RNA methyltransferase RlmN low > 70

Not shown: 0 genomes with orthologs for Psest_2018 only; 47 genomes with orthologs for Psest_1259 only