| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3988 | | phosphoenolpyruvate carboxykinase (ATP) | 1.0 | Psest_1248 | | RNA methyltransferase, TrmH family, group 1 | 0.40 | 12 |
| Pseudomonas sp. S08-1 | 0.83 | OH686_11060 | | phosphoenolpyruvate carboxykinase (ATP) | 0.86 | OH686_17460 | | tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.82 | AO356_10140 | | phosphoenolpyruvate carboxykinase [ATP] | 0.75 | AO356_06660 | | RNA methyltransferase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.82 | Pf6N2E2_3899 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | 0.75 | Pf6N2E2_3192 | | tRNA:Cm32/Um32 methyltransferase | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.81 | Psyr_0168 | | Phosphoenolpyruvate carboxykinase (ATP) | 0.71 | Psyr_1234 | | RNA methyltransferase TrmH, group 1 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.81 | Psyr_0168 | | Phosphoenolpyruvate carboxykinase (ATP) | 0.71 | Psyr_1234 | | RNA methyltransferase TrmH, group 1 | low | > 86 |
| Pseudomonas sp. RS175 | 0.81 | PFR28_04874 | | Phosphoenolpyruvate carboxykinase (ATP) | 0.76 | PFR28_00283 | | 'tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ' transl_table=11 | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.81 | Pf1N1B4_1779 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | 0.74 | Pf1N1B4_868 | | tRNA:Cm32/Um32 methyltransferase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.81 | PfGW456L13_420 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | 0.75 | PfGW456L13_4876 | | tRNA:Cm32/Um32 methyltransferase | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.80 | AO353_11775 | | phosphoenolpyruvate carboxykinase [ATP] | 0.75 | AO353_15820 | | RNA methyltransferase | low | > 101 |
| Pseudomonas simiae WCS417 | 0.79 | PS417_01210 | | hypothetical protein | 0.75 | PS417_23215 | | RNA methyltransferase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.79 | PFLU_RS01320 | | phosphoenolpyruvate carboxykinase | 0.76 | PFLU_RS24870 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.79 | PFLU_RS01320 | | phosphoenolpyruvate carboxykinase | 0.76 | PFLU_RS24870 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 109 |
| Marinobacter adhaerens HP15 | 0.74 | HP15_3498 | | phosphoenolpyruvate carboxykinase (ATP) | 0.50 | HP15_1484 | | RNA methyltransferase, TrmH family, group 1 | — | — |
| Shewanella loihica PV-4 | 0.71 | Shew_3623 | | phosphoenolpyruvate carboxykinase (RefSeq) | 0.45 | Shew_2320 | | RNA methyltransferase (RefSeq) | 0.60 | 8 |
| Shewanella oneidensis MR-1 | 0.71 | SO0162 | pckA | phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) | 0.44 | SO2261 | | RNA methyltransferase, TrmH family, group 1 (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_0147 | | phosphoenolpyruvate carboxykinase (RefSeq) | 0.44 | Shewana3_2283 | | RNA methyltransferase (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.71 | Sama_0165 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) | 0.44 | Sama_1290 | | RNA methyltransferase (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.70 | MIT1002_03972 | | Phosphoenolpyruvate carboxykinase [ATP] | 0.45 | MIT1002_02806 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ | low | > 70 |
| Agrobacterium fabrum C58 | 0.45 | Atu0035 | | phosphoenolpyruvate carboxykinase | 0.25 | Atu1868 | | tRNA/rRNA methyltransferase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.43 | SMc02562 | | phosphoenolpyruvate carboxykinase | 0.23 | SMc00482 | | hypothetical protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.43 | ABIE40_RS19415 | | phosphoenolpyruvate carboxykinase | 0.24 | ABIE40_RS10270 | | RNA methyltransferase | low | > 107 |
| Sphingomonas koreensis DSMZ 15582 | 0.43 | Ga0059261_0913 | | phosphoenolpyruvate carboxykinase (ATP) | 0.23 | Ga0059261_1984 | | rRNA methylase | low | > 68 |
| Dinoroseobacter shibae DFL-12 | 0.42 | Dshi_0213 | | Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) | 0.22 | Dshi_1513 | | tRNA/rRNA methyltransferase (SpoU) (RefSeq) | low | > 64 |
| Bosea sp. OAE506 | 0.41 | ABIE41_RS02665 | | phosphoenolpyruvate carboxykinase | 0.23 | ABIE41_RS13540 | | RNA methyltransferase | low | > 77 |
| Phaeobacter inhibens DSM 17395 | 0.41 | PGA1_c01140 | | phosphoenolpyruvate carboxykinase | 0.25 | PGA1_c15100 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ | low | > 62 |
| Pantoea sp. MT58 | 0.37 | IAI47_01830 | | phosphoenolpyruvate carboxykinase (ATP) | 0.49 | IAI47_04995 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 76 |
| Escherichia coli ECOR38 | 0.36 | HEPCGN_15865 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.51 | HEPCGN_20750 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 85 |
| Escherichia coli ECRC62 | 0.36 | BNILDI_02685 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.51 | BNILDI_12080 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Escherichia coli Nissle 1917 | 0.36 | ECOLIN_RS19435 | | phosphoenolpyruvate carboxykinase (ATP) | 0.51 | ECOLIN_RS14375 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Escherichia coli BL21 | 0.36 | ECD_03255 | | phosphoenolpyruvate carboxykinase [ATP] | 0.51 | ECD_02424 | | tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent | low | > 60 |
| Escherichia coli ECOR27 | 0.36 | NOLOHH_08835 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.51 | NOLOHH_13280 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 57 |
| Escherichia fergusonii Becca | 0.36 | EFB2_00425 | | Phosphoenolpyruvate carboxykinase (ATP) | 0.51 | EFB2_01358 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.36 | OHPLBJKB_00300 | | Phosphoenolpyruvate carboxykinase (ATP) | 0.51 | OHPLBJKB_01177 | | 'tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ' transl_table=11 | low | > 73 |
| Escherichia coli BW25113 | 0.36 | b3403 | pck | phosphoenolpyruvate carboxykinase (NCBI) | 0.51 | b2532 | yfhQ | predicted methyltransferase (NCBI) | low | > 76 |
| Kangiella aquimarina DSM 16071 | 0.36 | B158DRAFT_2395 | | phosphoenolpyruvate carboxykinase (ATP) | 0.46 | B158DRAFT_1456 | | RNA methyltransferase, TrmH family, group 1 | low | > 40 |
| Vibrio cholerae E7946 ATCC 55056 | 0.36 | CSW01_13810 | | phosphoenolpyruvate carboxykinase (ATP) | 0.42 | CSW01_03875 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 62 |
| Escherichia coli ECRC99 | 0.36 | KEDOAH_11095 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.51 | KEDOAH_06610 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Escherichia coli ECRC101 | 0.36 | MCAODC_07575 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.51 | MCAODC_12140 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Escherichia coli ECRC102 | 0.36 | NIAGMN_14815 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.51 | NIAGMN_19380 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Escherichia coli ECRC101 | 0.36 | OKFHMN_17045 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.51 | OKFHMN_21610 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Escherichia coli ECRC98 | 0.36 | JDDGAC_20675 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.51 | JDDGAC_25285 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Serratia liquefaciens MT49 | 0.36 | IAI46_10700 | | phosphoenolpyruvate carboxykinase (ATP) | 0.48 | IAI46_19365 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF615 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | 0.51 | GFF2437 | | tRNA:Cm32/Um32 methyltransferase | 0.34 | 58 |
| Enterobacter sp. TBS_079 | 0.36 | MPMX20_04290 | | Phosphoenolpyruvate carboxykinase (ATP) | 0.51 | MPMX20_03413 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ | low | > 85 |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_4140 | | phosphoenolpyruvate carboxykinase (ATP) | 0.52 | EX28DRAFT_0107 | | RNA methyltransferase, TrmH family, group 1 | low | > 76 |
| Dickeya dianthicola ME23 | 0.36 | DZA65_RS20830 | | phosphoenolpyruvate carboxykinase (ATP) | 0.47 | DZA65_RS16730 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 75 |
| Dickeya dianthicola 67-19 | 0.36 | HGI48_RS19740 | | phosphoenolpyruvate carboxykinase (ATP) | 0.47 | HGI48_RS15655 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 71 |
| Erwinia tracheiphila SCR3 | 0.36 | LU632_RS22930 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.48 | LU632_RS17880 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 74 |
| Klebsiella michiganensis M5al | 0.35 | BWI76_RS26155 | | phosphoenolpyruvate carboxykinase (ATP) | 0.50 | BWI76_RS21170 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 92 |
| Rahnella sp. WP5 | 0.35 | EX31_RS04780 | | phosphoenolpyruvate carboxykinase (ATP) | 0.48 | EX31_RS20555 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 89 |
| Dickeya dadantii 3937 | 0.35 | DDA3937_RS19610 | | phosphoenolpyruvate carboxykinase (ATP) | 0.47 | DDA3937_RS15555 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.35 | HER17_RS01710 | | phosphoenolpyruvate carboxykinase (ATP) | 0.47 | HER17_RS06005 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 75 |
Not shown: 11 genomes with orthologs for Psest_3988 only; 36 genomes with orthologs for Psest_1248 only