Conservation of cofitness between Echvi_2080 and Echvi_2047 in Echinicola vietnamensis KMM 6221, DSM 17526

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Echinicola vietnamensis KMM 6221, DSM 17526 1.0 Echvi_2080 Cystathionine beta-lyases/cystathionine gamma-synthases 1.0 Echvi_2047 RNA polymerase sigma factor, sigma-70 family 0.30 16
Pontibacter actiniarum KMM 6156, DSM 19842 0.78 CA264_20315 cystathionine gamma-synthase 0.63 CA264_00665 RNA polymerase subunit sigma-24 low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.68 ABZR88_RS06685 cystathionine gamma-synthase 0.51 ABZR88_RS13970 RNA polymerase sigma factor low > 71
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS18745 PLP-dependent aspartate aminotransferase family protein 0.22 ABZR86_RS07180 RNA polymerase sigma factor RpoE — —
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_1210 Cystathionine beta-lyases/cystathionine gamma-synthases 0.24 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE low > 40
Lysobacter sp. OAE881 0.55 ABIE51_RS04295 cystathionine gamma-synthase 0.23 ABIE51_RS13890 RNA polymerase sigma factor RpoE low > 62
Pseudomonas fluorescens SBW25 0.54 PFLU_RS16625 cystathionine gamma-synthase 0.23 PFLU_RS07230 RNA polymerase sigma factor RpoE low > 109
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS16625 cystathionine gamma-synthase 0.23 PFLU_RS07230 RNA polymerase sigma factor RpoE low > 109
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_4890 Cystathionine gamma-lyase (EC 4.4.1.1) 0.23 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT — —
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.4517.1 Cystathionine gamma-lyase (EC 4.4.1.1) 0.23 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE low > 74
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_23295 cystathionine beta-lyase 0.23 AO353_17625 RNA polymerase subunit sigma low > 101
Brevundimonas sp. GW460-12-10-14-LB2 0.53 A4249_RS08315 cystathionine gamma-synthase 0.15 A4249_RS10790 RNA polymerase sigma factor low > 48
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS05660 PLP-dependent aspartate aminotransferase family protein 0.24 LRK54_RS16940 RNA polymerase sigma factor RpoE low > 59
Rhodanobacter denitrificans MT42 0.53 LRK55_RS05410 cystathionine gamma-synthase 0.24 LRK55_RS16655 RNA polymerase sigma factor RpoE — —
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_01180 metC cystathionine beta-lyase 0.24 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE low > 52
Serratia liquefaciens MT49 0.51 IAI46_08275 PLP-dependent transferase 0.23 IAI46_19585 RNA polymerase sigma factor RpoE — —
Dechlorosoma suillum PS 0.48 Dsui_2042 cystathionine beta-lyase/cystathionine gamma-synthase 0.24 Dsui_2453 RNA polymerase sigma factor RpoE — —
Pectobacterium carotovorum WPP14 0.48 HER17_RS07405 PLP-dependent aspartate aminotransferase family protein 0.23 HER17_RS05780 RNA polymerase sigma factor RpoE — —
Klebsiella michiganensis M5al 0.46 BWI76_RS24210 cystathionine gamma-lyase 0.23 BWI76_RS21355 RNA polymerase sigma factor RpoE — —
Bifidobacterium breve UCC2003 0.45 BBR_RS13145 cystathionine gamma-synthase 0.19 BBR_RS15930 RNA polymerase sigma factor low > 34
Enterobacter asburiae PDN3 0.44 EX28DRAFT_1678 Cystathionine beta-lyases/cystathionine gamma-synthases 0.23 EX28DRAFT_0072 RNA polymerase sigma factor RpoE — —
Enterobacter sp. TBS_079 0.44 MPMX20_01953 Cystathionine beta-lyase 0.23 MPMX20_03444 ECF RNA polymerase sigma-E factor — —
Rhodopseudomonas palustris CGA009 0.43 TX73_012185 PLP-dependent aspartate aminotransferase family protein 0.20 TX73_024905 sigma-70 family RNA polymerase sigma factor low > 86
Shewanella amazonensis SB2B 0.42 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.20 Sama_0874 RNA polymerase sigma factor RpoE (RefSeq) low > 62
Shewanella loihica PV-4 0.41 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.22 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) low > 60
Shewanella sp. ANA-3 0.40 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.21 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) — —
Pseudomonas putida KT2440 0.39 PP_4594 putative Cystathionine gamma-synthase 0.23 PP_1427 RNA polymerase sigma E factor low > 96
Shewanella oneidensis MR-1 0.39 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.22 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) low > 76
Pseudomonas simiae WCS417 0.39 PS417_11735 methionine gamma-lyase 0.23 PS417_07120 RNA polymerase sigma-H factor low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.22 GFF2107 RNA polymerase sigma factor RpoE — —
Dickeya dadantii 3937 0.38 DDA3937_RS00950 cystathionine gamma-synthase 0.23 DDA3937_RS15765 RNA polymerase sigma factor RpoE low > 74
Escherichia coli ECOR27 0.38 NOLOHH_05820 metB cystathionine gamma-synthase 0.22 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECRC62 0.38 BNILDI_05715 metB cystathionine gamma-synthase 0.22 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli BL21 0.38 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.22 ECD_02467 RNA polymerase sigma E factor — —
Escherichia coli BW25113 0.38 b3939 metB cystathionine gamma-synthase (NCBI) 0.22 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_04111 Cystathionine gamma-synthase 0.22 OHPLBJKB_01134 ECF RNA polymerase sigma-E factor — —
Escherichia coli ECRC99 0.37 KEDOAH_14485 metB cystathionine gamma-synthase 0.22 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECRC102 0.37 NIAGMN_11430 metB cystathionine gamma-synthase 0.22 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECRC101 0.37 OKFHMN_13675 metB cystathionine gamma-synthase 0.22 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECRC98 0.37 JDDGAC_17300 metB cystathionine gamma-synthase 0.22 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECRC101 0.37 MCAODC_04175 metB cystathionine gamma-synthase 0.22 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECOR38 0.37 HEPCGN_12345 metB cystathionine gamma-synthase 0.22 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS22725 cystathionine gamma-synthase 0.22 ECOLIN_RS14560 RNA polymerase sigma factor RpoE — —
Escherichia fergusonii Becca 0.37 EFB2_04679 Cystathionine gamma-synthase 0.22 EFB2_01323 ECF RNA polymerase sigma-E factor — —
Dickeya dianthicola ME23 0.37 DZA65_RS21470 cystathionine gamma-synthase 0.23 DZA65_RS16930 RNA polymerase sigma factor RpoE low > 75
Dickeya dianthicola 67-19 0.37 HGI48_RS20425 cystathionine gamma-synthase 0.23 HGI48_RS15850 RNA polymerase sigma factor RpoE low > 71
Pantoea sp. MT58 0.37 IAI47_00880 cystathionine gamma-synthase 0.22 IAI47_04850 RNA polymerase sigma factor RpoE — —
Erwinia tracheiphila SCR3 0.37 LU632_RS19640 metB cystathionine gamma-synthase 0.23 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE low > 74
Rahnella sp. WP5 0.37 EX31_RS14215 cystathionine gamma-synthase 0.22 EX31_RS21800 RNA polymerase sigma factor RpoE — —
Acidovorax sp. GW101-3H11 0.36 Ac3H11_34 Methionine gamma-lyase (EC 4.4.1.11) 0.26 Ac3H11_1573 RNA polymerase sigma factor RpoE — —
Bosea sp. OAE506 0.30 ABIE41_RS21660 cystathionine gamma-synthase family protein 0.18 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor low > 77
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_1458 Cystathionine beta-lyases/cystathionine gamma-synthases 0.19 Ga0059261_2952 RNA polymerase sigma factor, sigma-70 family low > 68

Not shown: 6 genomes with orthologs for Echvi_2080 only; 29 genomes with orthologs for Echvi_2047 only