| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_03418 | | D-xylose transporter subunit | 1.0 | ECD_03752 | | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00138 | | D-xylose-binding periplasmic protein | 1.00 | OHPLBJKB_04186 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 73 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_12200 | xylF | D-xylose ABC transporter substrate-binding protein | 1.00 | KEDOAH_14030 | hemN | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_13710 | xylF | D-xylose ABC transporter substrate-binding protein | 1.00 | NIAGMN_11875 | hemN | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Escherichia coli BW25113 | 1.00 | b3566 | xylF | D-xylose transporter subunit (NCBI) | 1.00 | b3867 | hemN | O2-independent coproporphyrinogen III oxidase (VIMSS) | low | > 76 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_15950 | xylF | D-xylose ABC transporter substrate-binding protein | 1.00 | OKFHMN_14120 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 80 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_19580 | xylF | D-xylose ABC transporter substrate-binding protein | 1.00 | JDDGAC_17745 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 86 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_06465 | xylF | D-xylose ABC transporter substrate-binding protein | 1.00 | MCAODC_04620 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 87 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_14835 | xylF | D-xylose ABC transporter substrate-binding protein | 0.99 | HEPCGN_12755 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 87 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS20395 | | D-xylose ABC transporter substrate-binding protein | 0.99 | ECOLIN_RS22285 | | oxygen-independent coproporphyrinogen III oxidase | low | > 55 |
| Escherichia fergusonii Becca | 1.00 | EFB2_00241 | | D-xylose-binding periplasmic protein | 0.99 | EFB2_04750 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 86 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_03650 | xylF | D-xylose ABC transporter substrate-binding protein | 1.00 | BNILDI_05280 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_07895 | xylF | D-xylose ABC transporter substrate-binding protein | 1.00 | NOLOHH_06250 | hemN | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Klebsiella michiganensis M5al | 0.91 | BWI76_RS27030 | | D-xylose transporter subunit XylF | 0.90 | BWI76_RS00380 | | oxygen-independent coproporphyrinogen III oxidase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.89 | MPMX20_00164 | | D-xylose-binding periplasmic protein | 0.93 | MPMX20_04598 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.89 | EX28DRAFT_3831 | | D-xylose ABC transporter, substrate-binding protein | 0.93 | EX28DRAFT_4348 | | oxygen-independent coproporphyrinogen III oxidase | low | > 76 |
| Rahnella sp. WP5 | 0.84 | EX31_RS09760 | | D-xylose ABC transporter substrate-binding protein | 0.79 | EX31_RS15885 | | oxygen-independent coproporphyrinogen III oxidase | low | > 89 |
| Pantoea sp. MT58 | 0.83 | IAI47_00190 | | D-xylose ABC transporter substrate-binding protein | 0.76 | IAI47_00445 | | oxygen-independent coproporphyrinogen III oxidase | low | > 76 |
| Serratia liquefaciens MT49 | 0.82 | IAI46_00285 | | D-xylose ABC transporter substrate-binding protein | 0.82 | IAI46_24970 | | oxygen-independent coproporphyrinogen III oxidase | low | > 86 |
| Dickeya dadantii 3937 | 0.82 | DDA3937_RS20930 | | D-xylose ABC transporter substrate-binding protein | 0.79 | DDA3937_RS00120 | | oxygen-independent coproporphyrinogen III oxidase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.82 | HGI48_RS00315 | | D-xylose ABC transporter substrate-binding protein | 0.79 | HGI48_RS21245 | | oxygen-independent coproporphyrinogen III oxidase | low | > 71 |
| Dickeya dianthicola ME23 | 0.82 | DZA65_RS00315 | | D-xylose ABC transporter substrate-binding protein | 0.80 | DZA65_RS22220 | | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.79 | HER17_RS21080 | | D-xylose ABC transporter substrate-binding protein | 0.83 | HER17_RS21450 | | oxygen-independent coproporphyrinogen III oxidase | low | > 75 |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS22460 | | xylose ABC transporter substrate-binding protein | 0.47 | HSERO_RS16075 | | coproporphyrinogen III oxidase | low | > 78 |
| Dyella japonica UNC79MFTsu3.2 | 0.61 | ABZR86_RS14420 | | D-xylose ABC transporter substrate-binding protein | 0.45 | ABZR86_RS04455 | | oxygen-independent coproporphyrinogen III oxidase | low | > 74 |
| Ralstonia sp. UNC404CL21Col | 0.60 | ABZR87_RS18220 | | D-xylose ABC transporter substrate-binding protein | 0.46 | ABZR87_RS03910 | | oxygen-independent coproporphyrinogen III oxidase | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.60 | BPHYT_RS32820 | | xylose ABC transporter substrate-binding protein | 0.47 | BPHYT_RS15490 | | coproporphyrinogen III oxidase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.60 | PS417_10940 | | sugar ABC transporter substrate-binding protein | 0.49 | PS417_20775 | | coproporphyrinogen III oxidase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_1455 | | Xylose ABC transporter, periplasmic xylose-binding protein XylF | 0.48 | Pf6N2E2_2321 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_28505 | | sugar ABC transporter substrate-binding protein | 0.48 | AO356_02480 | | coproporphyrinogen III oxidase | low | > 104 |
| Paraburkholderia graminis OAS925 | 0.60 | ABIE53_004930 | | D-xylose transport system substrate-binding protein | 0.46 | ABIE53_003264 | | oxygen-independent coproporphyrinogen-3 oxidase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.60 | QEN71_RS25870 | | D-xylose ABC transporter substrate-binding protein | 0.47 | QEN71_RS03200 | | oxygen-independent coproporphyrinogen III oxidase | low | > 153 |
| Pseudomonas sp. RS175 | 0.60 | PFR28_02349 | | D-xylose-binding periplasmic protein | 0.49 | PFR28_01080 | | Oxygen-independent coproporphyrinogen III oxidase | 0.21 | 26 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS11300 | | D-xylose ABC transporter substrate-binding protein | 0.49 | PFLU_RS22385 | | oxygen-independent coproporphyrinogen III oxidase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_2884 | | xylose-binding protein | 0.48 | Psyr_3423 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS11300 | | D-xylose ABC transporter substrate-binding protein | 0.49 | PFLU_RS22385 | | oxygen-independent coproporphyrinogen III oxidase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_03877 | | xylose-binding protein | 0.45 | H281DRAFT_04040 | | oxygen-independent coproporphyrinogen-3 oxidase | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_2884 | | xylose-binding protein | 0.48 | Psyr_3423 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS24945 | | D-xylose ABC transporter substrate-binding protein | 0.46 | RS_RS16455 | | oxygen-independent coproporphyrinogen III oxidase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.56 | RPSI07_RS07635 | | D-xylose ABC transporter substrate-binding protein | 0.46 | RPSI07_RS08635 | | oxygen-independent coproporphyrinogen III oxidase | low | > 81 |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS16755 | | D-xylose ABC transporter substrate-binding protein | 0.46 | UW163_RS05010 | | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS23505 | | D-xylose ABC transporter substrate-binding protein | 0.46 | RALBFv3_RS08600 | | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Rhizobium sp. OAE497 | 0.38 | ABIE40_RS14020 | | D-xylose ABC transporter substrate-binding protein | 0.33 | ABIE40_RS26250 | | oxygen-independent coproporphyrinogen III oxidase | low | > 107 |
| Variovorax sp. SCN45 | 0.38 | GFF5603 | | D-xylose ABC transporter, substrate-binding protein XylF | 0.43 | GFF6957 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 127 |
| Sinorhizobium meliloti 1021 | 0.37 | SM_b20902 | | sugar uptake ABC transporter substrate-binding protein precursor | 0.32 | SMa1266 | | coproporphyrinogen III oxidase | low | > 103 |
| Variovorax sp. OAS795 | 0.37 | ABID97_RS01175 | | D-xylose ABC transporter substrate-binding protein | 0.45 | ABID97_RS16190 | | oxygen-independent coproporphyrinogen III oxidase | low | > 91 |
| Phaeobacter inhibens DSM 17395 | 0.37 | PGA1_262p00430 | | glucose transporter, periplasmic substrate-binding component (from data) | 0.30 | PGA1_c00360 | | oxygen-independent coproporphyrinogen III oxidase HemN | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.36 | Dshi_2000 | | xylitol ABC transporter, periplasmic substrate-binding protein (from data) | 0.34 | Dshi_0541 | | oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 64 |
| Agrobacterium fabrum C58 | 0.31 | Atu3576 | | xylose ABC transporter substrate-binding protein | 0.32 | Atu1601 | | oxygen-independent coproporphyrinogen III oxidase | low | > 89 |
| Azospirillum sp. SherDot2 | 0.30 | MPMX19_03028 | | D-xylose-binding periplasmic protein | 0.34 | MPMX19_02313 | | Oxygen-independent coproporphyrinogen III oxidase | low | > 112 |
| Acidovorax sp. GW101-3H11 | 0.28 | Ac3H11_610 | | L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) | 0.47 | Ac3H11_976 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | low | > 79 |
| Azospirillum brasilense Sp245 | 0.27 | AZOBR_RS31240 | | sugar ABC transporter substrate-binding protein | 0.33 | AZOBR_RS03710 | | coproporphyrinogen III oxidase | low | > 97 |
Not shown: 0 genomes with orthologs for ECD_03418 only; 36 genomes with orthologs for ECD_03752 only