Conservation of cofitness between ECD_03636 and ECD_03644 in Escherichia coli BL21

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03636 D-ribose ABC transporter permease 1.0 ECD_03644 magnesium chelatase family protein and putative transcriptional regulator 0.52 1
Escherichia coli ECRC100 1.00 OKFHMN_14740 rbsC ribose ABC transporter permease 0.99 OKFHMN_14665 yifB YifB family Mg chelatase-like AAA ATPase low > 80
Escherichia coli ECRC101 1.00 MCAODC_05245 rbsC ribose ABC transporter permease 0.99 MCAODC_05170 yifB YifB family Mg chelatase-like AAA ATPase low > 87
Escherichia coli BW25113 1.00 b3750 rbsC ribose ABC transporter permease protein (NCBI) 1.00 b3765 yifB predicted bifunctional enzyme and transcriptional regulator (RefSeq) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_18360 rbsC ribose ABC transporter permease 0.99 JDDGAC_18285 yifB YifB family Mg chelatase-like AAA ATPase low > 86
Escherichia coli ECOR27 1.00 NOLOHH_06875 rbsC ribose ABC transporter permease 1.00 NOLOHH_06800 yifB YifB family Mg chelatase-like AAA ATPase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04303 Ribose import permease protein RbsC 0.99 OHPLBJKB_04286 Competence protein ComM low > 73
Escherichia coli ECRC62 1.00 BNILDI_04650 rbsC ribose ABC transporter permease 0.99 BNILDI_04725 yifB YifB family Mg chelatase-like AAA ATPase low > 75
Escherichia coli ECRC99 1.00 KEDOAH_13410 rbsC ribose ABC transporter permease 0.90 KEDOAH_13485 yifB YifB family Mg chelatase-like AAA ATPase
Escherichia coli ECRC102 1.00 NIAGMN_12495 rbsC ribose ABC transporter permease 0.99 NIAGMN_12420 yifB YifB family Mg chelatase-like AAA ATPase
Escherichia fergusonii Becca 1.00 EFB2_04883 Ribose import permease protein RbsC 0.99 EFB2_04869 Competence protein ComM low > 86
Escherichia coli ECOR38 1.00 HEPCGN_13450 rbsC ribose ABC transporter permease 0.82 HEPCGN_13375 yifB YifB family Mg chelatase-like AAA ATPase low > 87
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4026 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 0.77 EX28DRAFT_4438 Mg chelatase-related protein low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_04617 Ribose import permease protein RbsC 0.76 MPMX20_04503 Competence protein ComM low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1707 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) 0.86 GFF2905 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS00280 ribose ABC transporter permease 0.76 BWI76_RS00950 ATP-dependent protease low > 92
Pectobacterium carotovorum WPP14 0.90 HER17_RS21540 ribose ABC transporter permease 0.65 HER17_RS01050 YifB family Mg chelatase-like AAA ATPase low > 75
Dickeya dadantii 3937 0.87 DDA3937_RS00040 ribose ABC transporter permease 0.65 DDA3937_RS20180 YifB family Mg chelatase-like AAA ATPase low > 74
Dickeya dianthicola ME23 0.87 DZA65_RS22305 ribose ABC transporter permease 0.65 DZA65_RS21365 YifB family Mg chelatase-like AAA ATPase low > 75
Dickeya dianthicola 67-19 0.87 HGI48_RS21325 ribose ABC transporter permease 0.65 HGI48_RS20325 YifB family Mg chelatase-like AAA ATPase low > 71
Serratia liquefaciens MT49 0.87 IAI46_25065 ribose ABC transporter permease 0.66 IAI46_24375 YifB family Mg chelatase-like AAA ATPase low > 86
Pantoea sp. MT58 0.85 IAI47_00360 ribose ABC transporter permease 0.66 IAI47_01010 YifB family Mg chelatase-like AAA ATPase low > 76
Rahnella sp. WP5 0.85 EX31_RS06180 ribose ABC transporter permease 0.62 EX31_RS14980 YifB family Mg chelatase-like AAA ATPase low > 89
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_14655 ribose ABC transporter permease 0.59 CSW01_00160 ATP-dependent protease low > 62
Azospirillum sp. SherDot2 0.46 MPMX19_03759 Ribose import permease protein RbsC 0.31 MPMX19_02482 Competence protein ComM low > 112
Mucilaginibacter yixingensis YX-36 DSM 26809 0.45 ABZR88_RS15230 ABC transporter permease 0.38 ABZR88_RS19740 YifB family Mg chelatase-like AAA ATPase
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_1280 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 0.39 Echvi_1735 Mg chelatase-related protein low > 79
Rhodospirillum rubrum S1H 0.43 Rru_A0248 inner-membrane translocator (NCBI) 0.32 Rru_A3589 Mg chelatase-related protein (NCBI) low > 58
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS05325 ribose ABC transporter permease 0.45 HSERO_RS00405 Fis family transcriptional regulator low > 78
Pseudomonas simiae WCS417 0.41 PS417_17725 ribose ABC transporter permease 0.49 PS417_27635 magnesium chelatase low > 88
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS19510 sugar ABC transporter permease 0.50 PFLU_RS29320 YifB family Mg chelatase-like AAA ATPase low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS19510 sugar ABC transporter permease 0.50 PFLU_RS29320 YifB family Mg chelatase-like AAA ATPase low > 109
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS16055 sugar ABC transporter permease 0.41 BPHYT_RS02535 magnesium chelatase subunit ChlI low > 109
Agrobacterium fabrum C58 0.39 Atu4322 ribose ABC transporter permease 0.34 Atu0311 hypothetical protein low > 89
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS02650 ABC transporter permease 0.42 QEN71_RS01390 YifB family Mg chelatase-like AAA ATPase low > 153
Paraburkholderia graminis OAS925 0.38 ABIE53_003385 ribose transport system permease protein 0.41 ABIE53_000652 magnesium chelatase family protein low > 113
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_2570 monosaccharide ABC transporter membrane protein, CUT2 family 0.45 Psyr_0197 Mg chelatase-related protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_2570 monosaccharide ABC transporter membrane protein, CUT2 family 0.45 Psyr_0197 Mg chelatase-related protein low > 86
Sinorhizobium meliloti 1021 0.37 SM_b21375 sugar uptake ABC transporter permease 0.32 SMc00420 hypothetical protein low > 103
Rhizobium sp. OAE497 0.37 ABIE40_RS24750 ABC transporter permease 0.36 ABIE40_RS01410 YifB family Mg chelatase-like AAA ATPase low > 107
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS03365 fructose ABC transporter, permease component (FrcC) (from data) 0.46 RR42_RS01740 ATP-dependent protease low > 128
Bifidobacterium breve UCC2003 0.32 BBR_RS17765 ABC transporter permease 0.31 BBR_RS14570 ATP-binding protein low > 34
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_524 Inositol transport system permease protein 0.50 Pf6N2E2_4404 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_21390 m-Inositol ABC transporter, permease component (iatP) (from data) 0.50 AO353_09090 magnesium chelatase low > 101
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_23210 ABC transporter 0.49 AO356_12685 magnesium chelatase low > 104
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_4287 Inositol transport system permease protein 0.47 Pf1N1B4_2162 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 87
Acidovorax sp. GW101-3H11 0.30 Ac3H11_3036 Fructose ABC transporter, permease component FrcC 0.42 Ac3H11_3404 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 79
Ralstonia solanacearum UW163 0.30 UW163_RS12910 ABC transporter permease 0.44 UW163_RS02755 ATP-dependent protease
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS15450 ABC transporter permease 0.44 RALBFv3_RS10825 ATP-dependent protease low > 76
Caulobacter crescentus NA1000 0.29 CCNA_00904 inositol ABC transport system, permease protein IatP 0.32 CCNA_00139 magnesium chelatase subunit ChlI-like ATPase low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_00904 inositol ABC transport system, permease protein IatP 0.32 CCNA_00139 magnesium chelatase subunit ChlI-like ATPase low > 67
Pseudomonas putida KT2440 0.28 PP_2456 D-ribose ABC transporter - permease subunit 0.45 PP_5239 putative ATP-dependent chelatase low > 96
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF198 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) 0.38 GFF1924 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein low > 90
Variovorax sp. OAS795 0.27 ABID97_RS00430 ABC transporter permease 0.42 ABID97_RS03620 YifB family Mg chelatase-like AAA ATPase low > 91
Variovorax sp. SCN45 0.27 GFF3691 ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose) 0.36 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination low > 127
Bosea sp. OAE506 0.27 ABIE41_RS06850 ABC transporter permease 0.35 ABIE41_RS03155 YifB family Mg chelatase-like AAA ATPase low > 77
Azospirillum brasilense Sp245 0.27 AZOBR_RS27940 ABC transporter permease 0.32 AZOBR_RS02315 ATPase AAA low > 97

Not shown: 2 genomes with orthologs for ECD_03636 only; 36 genomes with orthologs for ECD_03644 only