Conservation of cofitness between ECD_03253 and ECD_03029 in Escherichia coli BL21

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03253 heat shock protein Hsp33 1.0 ECD_03029 ATP-dependent RNA helicase 0.51 13
Escherichia coli ECOR27 1.00 NOLOHH_08845 hslO Hsp33 family molecular chaperone HslO 1.00 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD low > 75
Escherichia coli ECRC101 1.00 MCAODC_07585 hslO Hsp33 family molecular chaperone HslO 1.00 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD 0.53 48
Escherichia coli BW25113 1.00 b3401 yrfI orf, hypothetical protein (VIMSS) 1.00 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) 0.26 29
Escherichia fergusonii Becca 1.00 EFB2_00427 33 kDa chaperonin 1.00 EFB2_00661 ATP-dependent RNA helicase DeaD low > 86
Escherichia coli ECRC102 1.00 NIAGMN_14825 hslO Hsp33 family molecular chaperone HslO 1.00 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECRC62 1.00 BNILDI_02675 hslO Hsp33 family molecular chaperone HslO 1.00 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD low > 75
Escherichia coli ECRC99 1.00 KEDOAH_11085 hslO Hsp33 family molecular chaperone HslO 1.00 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19420 Hsp33 family molecular chaperone HslO 1.00 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00302 33 kDa chaperonin 1.00 OHPLBJKB_00538 ATP-dependent RNA helicase DeaD low > 73
Escherichia coli ECRC98 1.00 JDDGAC_20685 hslO Hsp33 family molecular chaperone HslO 1.00 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD low > 86
Escherichia coli ECRC100 1.00 OKFHMN_17055 hslO Hsp33 family molecular chaperone HslO 1.00 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD 0.66 79
Escherichia coli ECOR38 1.00 HEPCGN_15875 hslO Hsp33 family molecular chaperone HslO 1.00 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF618 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.89 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_04289 33 kDa chaperonin 0.85 MPMX20_04066 ATP-dependent RNA helicase DeaD low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_4141 Disulfide bond chaperones of the HSP33 family 0.84 EX28DRAFT_3211 Superfamily II DNA and RNA helicases — —
Klebsiella michiganensis M5al 0.88 BWI76_RS26150 molecular chaperone Hsp33 0.86 BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase — —
Erwinia tracheiphila SCR3 0.75 LU632_RS22925 hslO Hsp33 family molecular chaperone HslO 0.78 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase — —
Serratia liquefaciens MT49 0.75 IAI46_23765 Hsp33 family molecular chaperone HslO 0.80 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase low > 86
Pantoea sp. MT58 0.74 IAI47_01835 Hsp33 family molecular chaperone HslO 0.78 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase low > 76
Pectobacterium carotovorum WPP14 0.73 HER17_RS01715 Hsp33 family molecular chaperone HslO 0.78 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS19605 Hsp33 family molecular chaperone HslO 0.79 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS19735 Hsp33 family molecular chaperone HslO 0.78 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS20825 Hsp33 family molecular chaperone HslO 0.78 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase — —
Rahnella sp. WP5 0.71 EX31_RS04775 Hsp33 family molecular chaperone HslO 0.80 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase low > 89
Shewanella oneidensis MR-1 0.57 SO0163 hslO chaperonin HslO (NCBI ptt file) 0.42 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_13805 Hsp33 family molecular chaperone HslO 0.37 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase low > 62
Shewanella sp. ANA-3 0.56 Shewana3_0148 hslO Hsp33-like chaperonin (RefSeq) 0.43 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) low > 73
Shewanella loihica PV-4 0.56 Shew_3622 hslO Hsp33-like chaperonin (RefSeq) 0.46 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.51 Sama_0166 hslO Hsp33-like chaperonin (RefSeq) 0.45 Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.44 MIT1002_03973 Heat shock protein 33 0.45 MIT1002_00666 Cold-shock DEAD box protein A low > 70
Pseudomonas sp. S08-1 0.39 OH686_11065 33 kDa chaperonin HslO 0.37 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) low > 80
Pseudomonas simiae WCS417 0.38 PS417_01205 molecular chaperone Hsp33 0.36 PS417_08540 RNA helicase — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS01315 Hsp33 family molecular chaperone HslO 0.36 PFLU_RS08490 DEAD/DEAH box helicase low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS01315 Hsp33 family molecular chaperone HslO 0.36 PFLU_RS08490 DEAD/DEAH box helicase — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_11770 molecular chaperone Hsp33 0.36 AO353_19130 RNA helicase — —
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_3900 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.36 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) — —
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_1777 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.36 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) — —
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_10145 molecular chaperone Hsp33 0.36 AO356_03110 RNA helicase — —
Pseudomonas sp. RS175 0.36 PFR28_04873 33 kDa chaperonin 0.36 PFR28_00980 ATP-dependent RNA helicase DeaD low > 88
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_422 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.36 PfGW456L13_2247 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) — —
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0686 Disulfide bond chaperones of the HSP33 family 0.44 B158DRAFT_1850 ATP-dependent RNA helicase CsdA (EC 5.99.1.-) low > 40
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0169 Hsp33 protein 0.36 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal — —
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0169 Hsp33 protein 0.36 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal — —
Pseudomonas stutzeri RCH2 0.34 Psest_3989 Disulfide bond chaperones of the HSP33 family 0.36 Psest_1804 Superfamily II DNA and RNA helicases low > 67
Pseudomonas putida KT2440 0.34 PP_0252 33 kDa chaperonin 0.36 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD — —
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS05450 Hsp33 family molecular chaperone HslO 0.43 LRK54_RS02650 DEAD/DEAH box helicase low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS05225 Hsp33 family molecular chaperone HslO 0.43 LRK55_RS02405 DEAD/DEAH box helicase low > 63
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS18925 Hsp33 family molecular chaperone HslO 0.43 ABZR86_RS08990 DEAD/DEAH box helicase low > 74
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_01355 hslO heat-shock protein Hsp33 0.43 OKGIIK_09705 ATP-dependent RNA helicase low > 52
Dechlorosoma suillum PS 0.30 Dsui_2544 disulfide bond chaperone 0.46 Dsui_1351 DNA/RNA helicase, superfamily II low > 51
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.1584.1 33 kDa chaperonin (Heat shock protein 33) (HSP33) 0.43 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) low > 74
Fusobacterium nucleatum SB010 0.14 HUW76_01565 Hsp33 family molecular chaperone HslO 0.27 HUW76_10100 DEAD/DEAH box helicase low > 35

Not shown: 35 genomes with orthologs for ECD_03253 only; 14 genomes with orthologs for ECD_03029 only