Conservation of cofitness between ECD_02848 and ECD_03015 in Escherichia coli BL21

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02848 glycolate oxidase subunit, FAD-linked 1.0 ECD_03015 UPF0102 family protein 0.43 37
Escherichia coli BW25113 1.00 b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) 1.00 b3148 yraN hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_10920 glcD glycolate oxidase subunit GlcD 0.99 NOLOHH_10025 yraN YraN family protein low > 75
Escherichia coli ECRC62 1.00 BNILDI_00595 glcD glycolate oxidase subunit GlcD 1.00 BNILDI_01505 yraN YraN family protein low > 75
Escherichia fergusonii Becca 1.00 EFB2_00835 putative FAD-linked oxidoreductase 1.00 EFB2_00675 hypothetical protein low > 86
Escherichia coli ECOR38 0.99 HEPCGN_17995 glcD glycolate oxidase subunit GlcD 0.99 HEPCGN_17100 yraN YraN family protein low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17140 glycolate oxidase subunit GlcD 1.00 ECOLIN_RS18095 YraN family protein low > 55
Pseudomonas stutzeri RCH2 0.84 Psest_3841 D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) (from data) 0.34 Psest_3272 TIGR00252 family protein low > 67
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_5862 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.30 Pf1N1B4_955 Predicted endonuclease distantly related to archaeal Holliday junction resolvase
Pseudomonas putida KT2440 0.82 PP_3745 glycolate oxidase, putative FAD-linked subunit 0.33 PP_1324 putative endonuclease distantly related to archaeal Holliday junction resolvase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.33 Psyr_4114 Protein of unknown function UPF0102 low > 86
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.33 Psyr_4114 Protein of unknown function UPF0102 low > 86
Pseudomonas sp. RS175 0.81 PFR28_02758 putative FAD-linked oxidoreductase 0.29 PFR28_03599 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_01090 glycolate oxidase subunit GlcD 0.31 AO356_17100 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_137 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.30 Pf6N2E2_5344 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 103
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS31645 FAD-binding protein 0.35 BPHYT_RS01945 hypothetical protein low > 109
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS19105 FAD-binding protein 0.32 HSERO_RS23355 hypothetical protein
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF2733 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.24 GFF2716 Predicted endonuclease distantly related to archaeal Holliday junction resolvase
Ralstonia solanacearum UW163 0.60 UW163_RS08135 FAD-binding oxidoreductase 0.37 UW163_RS05120 YraN family protein
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS05490 FAD-binding oxidoreductase 0.37 RALBFv3_RS08490 YraN family protein low > 76
Dechlorosoma suillum PS 0.60 Dsui_3415 FAD/FMN-dependent dehydrogenase 0.42 Dsui_0252 TIGR00252 family protein low > 51
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS17300 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.33 RR42_RS19735 hypothetical protein low > 128
Marinobacter adhaerens HP15 0.59 HP15_3024 FAD linked oxidase domain protein 0.30 HP15_551 hypothetical protein low > 73
Ralstonia solanacearum PSI07 0.59 RPSI07_RS11810 FAD-binding oxidoreductase 0.38 RPSI07_RS08735 YraN family protein low > 81
Ralstonia solanacearum GMI1000 0.59 RS_RS13350 FAD-binding oxidoreductase 0.34 RS_RS16355 YraN family protein low > 80
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS01135 FAD-linked oxidase C-terminal domain-containing protein 0.35 ABZR87_RS03810 YraN family protein low > 80
Variovorax sp. OAS795 0.58 ABID97_RS03650 FAD-linked oxidase C-terminal domain-containing protein 0.28 ABID97_RS00280 YraN family protein low > 91
Variovorax sp. SCN45 0.57 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.28 GFF3736 UPF0102 protein YraN low > 127
Sinorhizobium meliloti 1021 0.41 SMc00832 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.20 SMc00418 hypothetical protein low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU3027 glcD glycolate oxidase, subunit GlcD (TIGR) 0.18 DVU0833 conserved hypothetical protein TIGR00252 (TIGR) low > 55
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_13425 FAD-binding oxidoreductase 0.19 CA264_16405 YraN family protein low > 74
Lysobacter sp. OAE881 0.27 ABIE51_RS04670 FAD-linked oxidase C-terminal domain-containing protein 0.34 ABIE51_RS04685 YraN family protein low > 62
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_11750 Dimethylmenaquinone methyltransferase 0.35 OKGIIK_11745 yraN YraN family protein low > 52
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS12175 FAD-binding protein 0.34 LRK54_RS12180 YraN family protein 0.20 32
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS11500 FAD-linked oxidase C-terminal domain-containing protein 0.34 ABZR86_RS11390 YraN family protein low > 74
Rhodanobacter denitrificans MT42 0.25 LRK55_RS11910 FAD-linked oxidase C-terminal domain-containing protein 0.34 LRK55_RS11915 YraN family protein low > 63
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.4376.1 D-2-hydroxyglutarate dehydrogenase 0.32 Xcc-8004.4374.1 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 74
Fusobacterium nucleatum SB010 0.22 HUW76_09430 FAD-binding oxidoreductase 0.26 HUW76_08565 YraN family protein low > 35
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS15570 FAD-binding protein 0.34 PFLU_RS04645 YraN family protein low > 109
Pseudomonas fluorescens SBW25 0.20 PFLU_RS15570 FAD-binding protein 0.34 PFLU_RS04645 YraN family protein low > 109
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_1492 FAD/FMN-containing dehydrogenases 0.35 B158DRAFT_2107 TIGR00252 family protein low > 40
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_944 D-2-hydroxyglutarate dehydrogenase 0.29 PfGW456L13_1641 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 87
Pseudomonas simiae WCS417 0.17 PS417_27035 FAD-linked oxidase 0.33 PS417_04580 hypothetical protein low > 88
Acinetobacter radioresistens SK82 0.16 MPMX26_02772 putative FAD-linked oxidoreductase 0.32 MPMX26_02280 hypothetical protein

Not shown: 27 genomes with orthologs for ECD_02848 only; 23 genomes with orthologs for ECD_03015 only