Conservation of cofitness between ECD_04037 and ECD_02846 in Escherichia coli BL21

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04037 methyl-directed mismatch repair protein 1.0 ECD_02846 glycolate oxidase 4Fe-4S iron-sulfur cluster subunit low > 61
Escherichia coli BW25113 1.00 b4170 mutL DNA mismatch repair protein (NCBI) 1.00 b4467 glcF glycolate oxidase iron-sulfur subunit (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL 1.00 BNILDI_00585 glcF glycolate oxidase subunit GlcF low > 75
Escherichia coli ECOR27 1.00 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 1.00 NOLOHH_10930 glcF glycolate oxidase subunit GlcF low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03872 DNA mismatch repair protein MutL 1.00 OHPLBJKB_00729 Lactate utilization protein A low > 73
Escherichia coli ECOR38 0.99 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 1.00 HEPCGN_18005 glcF glycolate oxidase subunit GlcF low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 1.00 ECOLIN_RS17130 glycolate oxidase subunit GlcF low > 55
Escherichia fergusonii Becca 0.99 EFB2_04365 DNA mismatch repair protein MutL 1.00 EFB2_00837 Lactate utilization protein A low > 86
Pseudomonas stutzeri RCH2 0.36 Psest_0681 DNA mismatch repair protein MutL 0.75 Psest_3839 D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) (from data) low > 67
Marinobacter adhaerens HP15 0.35 HP15_2501 DNA mismatch repair protein mutL 0.57 HP15_3022 protein of unknown function cysteine-rich region domain protein low > 73
Pseudomonas putida KT2440 0.35 PP_4896 DNA mismatch repair protein MutL 0.72 PP_3747 glycolate oxidase, iron-sulfur subunit low > 96
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.70 Pf6N2E2_135 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF low > 103
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0570 DNA mismatch repair protein MutL 0.72 Psyr_3333 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0570 DNA mismatch repair protein MutL 0.72 Psyr_3333 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224 low > 86
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_08665 DNA mismatch repair protein 0.70 AO356_01100 glycolate oxidase iron-sulfur subunit low > 104
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.72 Pf1N1B4_5864 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF low > 87
Pseudomonas sp. RS175 0.34 PFR28_05119 DNA mismatch repair protein MutL 0.69 PFR28_02760 Lactate utilization protein A low > 88
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13135 DNA mismatch repair protein 0.71 AO353_21300 glycolate oxidase iron-sulfur subunit low > 101
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS00855 DNA mismatch repair endonuclease MutL 0.14 ABZR86_RS12030 (Fe-S)-binding protein low > 74
Ralstonia solanacearum UW163 0.28 UW163_RS08395 DNA mismatch repair endonuclease MutL 0.53 UW163_RS08125 glycolate oxidase iron-sulfur subunit
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS05230 DNA mismatch repair endonuclease MutL 0.53 RALBFv3_RS05500 glycolate oxidase iron-sulfur subunit low > 76
Ralstonia solanacearum GMI1000 0.28 RS_RS12850 DNA mismatch repair protein MutL 0.53 RS_RS13360 glycolate oxidase iron-sulfur subunit low > 80
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS04190 DNA mismatch repair protein 0.57 HSERO_RS19095 glycolate oxidase low > 78
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS00870 DNA mismatch repair endonuclease MutL 0.55 ABZR87_RS01150 glycolate oxidase subunit GlcF low > 80
Dechlorosoma suillum PS 0.27 Dsui_1551 DNA mismatch repair protein MutL 0.58 Dsui_3413 Fe-S oxidoreductase low > 51
Ralstonia solanacearum PSI07 0.27 RPSI07_RS12070 DNA mismatch repair endonuclease MutL 0.54 RPSI07_RS11800 glycolate oxidase iron-sulfur subunit low > 81
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS17205 DNA mismatch repair protein 0.56 RR42_RS17315 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) (from data) low > 128
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS26435 DNA mismatch repair endonuclease MutL 0.68 QEN71_RS38025 glycolate oxidase subunit GlcF low > 153
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04712 DNA mismatch repair protein MutL 0.54 H281DRAFT_04681 glycolate oxidase iron-sulfur subunit low > 103
Acidovorax sp. GW101-3H11 0.25 Ac3H11_313 DNA mismatch repair protein MutL 0.55 Ac3H11_3398 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF low > 79
Castellaniella sp019104865 MT123 0.25 ABCV34_RS08785 DNA mismatch repair endonuclease MutL 0.47 ABCV34_RS06805 glycolate oxidase subunit GlcF
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS03650 DNA mismatch repair protein 0.69 BPHYT_RS31655 glycolate oxidase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF5485 DNA mismatch repair protein MutL 0.53 GFF1919 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF low > 90
Variovorax sp. SCN45 0.24 GFF4800 DNA mismatch repair protein MutL 0.54 GFF6597 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF low > 127
Variovorax sp. OAS795 0.24 ABID97_RS20310 DNA mismatch repair endonuclease MutL 0.52 ABID97_RS03660 glycolate oxidase subunit GlcF low > 91
Azospirillum brasilense Sp245 0.22 AZOBR_RS05025 DNA mismatch repair protein MutL 0.38 AZOBR_RS05735 2-hydroxy-acid oxidase low > 97
Azospirillum sp. SherDot2 0.22 MPMX19_01619 DNA mismatch repair protein MutL 0.38 MPMX19_00303 Lactate utilization protein A low > 112
Phaeobacter inhibens DSM 17395 0.21 PGA1_c32740 DNA mismatch repair protein MutL 0.40 PGA1_c29700 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) (from data) low > 62
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_0371 DNA mismatch repair protein MutL 0.39 Ga0059261_2633 Fe-S oxidoreductase low > 68
Bosea sp. OAE506 0.19 ABIE41_RS23235 DNA mismatch repair endonuclease MutL 0.38 ABIE41_RS22135 glycolate oxidase subunit GlcF low > 77

Not shown: 40 genomes with orthologs for ECD_04037 only; 10 genomes with orthologs for ECD_02846 only