Conservation of cofitness between ECD_02883 and ECD_02780 in Escherichia coli BL21

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02883 transcriptional activator of yqhD 1.0 ECD_02780 putative PilT family AAA+ ATPase 0.71 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00691 HTH-type transcriptional activator RhaS 0.98 OHPLBJKB_00766 putative protein YggR low > 73
Escherichia coli ECOR38 1.00 HEPCGN_17815 yqhC DNA-binding transcriptional regulator YqhC 0.98 HEPCGN_18565 yggR Uncharacterized protein YggR low > 87
Escherichia coli ECRC99 1.00 KEDOAH_09195 yqhC DNA-binding transcriptional regulator YqhC 0.98 KEDOAH_08880 yggR Uncharacterized protein YggR — —
Escherichia coli ECRC101 1.00 MCAODC_09465 yqhC DNA-binding transcriptional regulator YqhC 0.98 MCAODC_09780 yggR Uncharacterized protein YggR low > 87
Escherichia coli ECRC98 1.00 JDDGAC_22585 yqhC DNA-binding transcriptional regulator YqhC 0.98 JDDGAC_22890 yggR Uncharacterized protein YggR low > 86
Escherichia coli ECRC62 1.00 BNILDI_00790 yqhC DNA-binding transcriptional regulator YqhC 0.98 BNILDI_09710 yggR Uncharacterized protein YggR low > 75
Escherichia coli ECRC102 1.00 NIAGMN_16715 yqhC DNA-binding transcriptional regulator YqhC 0.98 NIAGMN_17025 yggR Uncharacterized protein YggR — —
Escherichia coli ECRC100 1.00 OKFHMN_18950 yqhC DNA-binding transcriptional regulator YqhC 0.98 OKFHMN_19260 yggR Uncharacterized protein YggR low > 80
Escherichia coli BW25113 1.00 b3010 yqhC putative ARAC-type regulatory protein (VIMSS) 1.00 b2950 yggR putative protein transport (VIMSS) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_10725 yqhC DNA-binding transcriptional regulator YqhC 0.98 NOLOHH_11130 yggR Uncharacterized protein YggR low > 75
Escherichia fergusonii Becca 0.99 EFB2_00800 HTH-type transcriptional activator RhaS 0.97 EFB2_00952 putative protein YggR 0.35 23
Escherichia coli Nissle 1917 0.93 ECOLIN_RS17325 DNA-binding transcriptional regulator YqhC 0.97 ECOLIN_RS16410 type IV pilus twitching motility protein PilT low > 55
Klebsiella michiganensis M5al 0.83 BWI76_RS24295 AraC family transcriptional regulator 0.68 BWI76_RS24095 twitching motility protein PilT 0.12 68
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF3122 Transcriptional regulator, AraC family 0.79 GFF3053 Twitching motility protein PilT low > 78
Enterobacter asburiae PDN3 0.77 EX28DRAFT_3048 AraC-type DNA-binding domain-containing proteins 0.71 EX28DRAFT_2988 pilus retraction protein PilT low > 76
Enterobacter sp. TBS_079 0.75 MPMX20_03854 HTH-type transcriptional activator RhaS 0.74 MPMX20_03808 putative protein YggR low > 85
Pantoea sp. MT58 0.61 IAI47_03205 AraC family transcriptional regulator 0.60 IAI47_03600 type IV pilus twitching motility protein PilT low > 76
Rahnella sp. WP5 0.56 EX31_RS08035 AraC family transcriptional regulator 0.54 EX31_RS02680 type IV pilus twitching motility protein PilT low > 89
Serratia liquefaciens MT49 0.55 IAI46_21745 AraC family transcriptional regulator 0.51 IAI46_21405 type IV pilus twitching motility protein PilT low > 86
Dickeya dianthicola ME23 0.54 DZA65_RS01775 AraC family transcriptional regulator 0.60 DZA65_RS18430 type IV pilus twitching motility protein PilT low > 75
Dickeya dianthicola 67-19 0.53 HGI48_RS01700 AraC family transcriptional regulator 0.60 HGI48_RS17340 type IV pilus twitching motility protein PilT low > 71
Dickeya dadantii 3937 0.53 DDA3937_RS01805 AraC family transcriptional regulator 0.60 DDA3937_RS17295 type IV pilus twitching motility protein PilT low > 74
Pectobacterium carotovorum WPP14 0.51 HER17_RS19700 AraC family transcriptional regulator 0.57 HER17_RS03815 type IV pilus twitching motility protein PilT low > 75
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_07615 AraC family transcriptional regulator 0.43 AO356_13430 twitching motility protein PilT low > 104
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_3409 Hypothetical transcriptional regulator YqhC 0.43 Pf6N2E2_4602 Twitching motility protein PilT low > 103
Pseudomonas sp. RS175 0.37 PFR28_00040 HTH-type transcriptional activator RhaS 0.43 PFR28_04241 Twitching mobility protein low > 88
Pseudomonas putida KT2440 0.34 PP_2425 putative transcriptional regulator, AraC family 0.39 PP_5093 twitching motility protein low > 96
Pseudomonas simiae WCS417 0.34 PS417_13365 AraC family transcriptional regulator 0.43 PS417_26720 twitching motility protein PilT low > 88
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_0530 transcriptional regulator, AraC family (RefSeq) 0.39 DvMF_1038 twitching motility protein (RefSeq) low > 51
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_01245 AraC family transcriptional regulator 0.44 AO353_08155 twitching motility protein PilT low > 101
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS03645 AraC family transcriptional regulator 0.45 ABZR87_RS01220 type IV pilus twitching motility protein PilT low > 80
Shewanella loihica PV-4 0.32 Shew_0071 AraC family transcriptional regulator (RefSeq) 0.45 Shew_1138 twitching motility protein (RefSeq) low > 60
Pseudomonas fluorescens SBW25 0.32 PFLU_RS22930 AraC family transcriptional regulator 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS22930 AraC family transcriptional regulator 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2133 Transcriptional regulator, AraC family 0.43 PfGW456L13_1012 Twitching motility protein PilT low > 87
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_1993 transcriptional regulator, AraC family 0.45 Psyr_0478 pilus retraction ATPase PilT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_1993 transcriptional regulator, AraC family 0.45 Psyr_0478 pilus retraction ATPase PilT low > 86
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_394 Transcriptional regulator, AraC family 0.43 Pf1N1B4_2343 Twitching motility protein PilT low > 87
Lysobacter sp. OAE881 0.29 ABIE51_RS08850 AraC family transcriptional regulator 0.45 ABIE51_RS16055 type IV pilus twitching motility protein PilT low > 62
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS01580 AraC family transcriptional regulator 0.40 HSERO_RS19000 twitching motility protein PilT low > 78
Pseudomonas sp. S08-1 0.24 OH686_18355 Transcriptional regulator, AraC family 0.43 OH686_10970 Twitching motility protein PilT low > 80
Pseudomonas stutzeri RCH2 0.23 Psest_1393 AraC-type DNA-binding domain-containing proteins 0.43 Psest_0285 pilus retraction protein PilT low > 67
Ralstonia solanacearum PSI07 0.23 RPSI07_RS04190 AraC family transcriptional regulator 0.44 RPSI07_RS11730 type IV pili twitching motility protein PilT low > 81
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS07015 AraC family transcriptional regulator 0.45 ABZR86_RS10420 type IV pilus twitching motility protein PilT low > 74
Variovorax sp. OAS795 0.22 ABID97_RS28720 AraC family transcriptional regulator 0.45 ABID97_RS00255 type IV pilus twitching motility protein PilT low > 91
Shewanella sp. ANA-3 0.22 Shewana3_1698 AraC family transcriptional regulator (RefSeq) 0.46 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) low > 73
Variovorax sp. SCN45 0.22 GFF141 Transcriptional regulator, AraC family 0.44 GFF3743 Twitching motility protein PilT low > 127
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1800.1 hypothetical protein 0.45 Xcc-8004.1713.1 Twitching motility protein PilT low > 74
Shewanella amazonensis SB2B 0.22 Sama_2712 AraC family transcriptional regulator (RefSeq) 0.46 Sama_2476 twitching motility protein (RefSeq) low > 62
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS20725 AraC family transcriptional regulator 0.44 RALBFv3_RS05570 type IV pili twitching motility protein PilT low > 76

Not shown: 5 genomes with orthologs for ECD_02883 only; 19 genomes with orthologs for ECD_02780 only