| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_00078 | | global transcription factor | 1.0 | ECD_02232 | | histidine ABC transporter permease | low | > 61 |
| Escherichia coli BW25113 | 1.00 | b0076 | leuO | probable transcriptional activator for leuABCD operon (VIMSS) | 1.00 | b2307 | hisM | histidine/lysine/arginine/ornithine transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_08560 | leuO | transcriptional regulator LeuO | 0.99 | BNILDI_13280 | hisM | Histidine transport system permease protein HisM | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03582 | | HTH-type transcriptional regulator LeuO | 0.99 | OHPLBJKB_01398 | | Histidine transport system permease protein HisM | low | > 73 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_01220 | leuO | transcriptional regulator LeuO | 0.99 | MCAODC_13780 | hisM | Histidine transport system permease protein HisM | low | > 87 |
| Escherichia fergusonii Becca | 0.99 | EFB2_03970 | | HTH-type transcriptional regulator LeuO | 1.00 | EFB2_01551 | | Histidine transport system permease protein HisM | low | > 86 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_03050 | leuO | transcriptional regulator LeuO | 0.99 | NOLOHH_14360 | hisM | Histidine transport system permease protein HisM | low | > 75 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_17450 | leuO | transcriptional regulator LeuO | 0.99 | KEDOAH_05455 | hisM | Histidine transport system permease protein HisM | — | — |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS00410 | | transcriptional regulator LeuO | 1.00 | ECOLIN_RS13380 | | ABC transporter permease | low | > 55 |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_10705 | leuO | transcriptional regulator LeuO | 0.99 | OKFHMN_22740 | hisM | Histidine transport system permease protein HisM | low | > 80 |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_08555 | leuO | transcriptional regulator LeuO | 0.99 | NIAGMN_20510 | hisM | Histidine transport system permease protein HisM | — | — |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_14300 | leuO | transcriptional regulator LeuO | 0.99 | JDDGAC_26700 | hisM | Histidine transport system permease protein HisM | low | > 86 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_08685 | leuO | transcriptional regulator LeuO | 0.99 | HEPCGN_21935 | hisM | Histidine transport system permease protein HisM | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.89 | GFF162 | | Probable transcriptional activator for leuABCD operon | 0.91 | GFF1916 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.83 | EX28DRAFT_3672 | | Transcriptional regulator | 0.95 | EX28DRAFT_0297 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | low | > 76 |
| Klebsiella michiganensis M5al | 0.82 | BWI76_RS04690 | | transcriptional regulator LeuO | 0.95 | BWI76_RS20325 | | histidine/lysine/arginine/ornithine ABC transporter permease HisM | low | > 92 |
| Enterobacter sp. TBS_079 | 0.81 | MPMX20_00770 | | HTH-type transcriptional regulator LeuO | 0.94 | MPMX20_03242 | | Histidine transport system permease protein HisM | low | > 85 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_03365 | | transcriptional regulator LeuO | 0.85 | IAI46_17790 | | ABC transporter permease | low | > 86 |
| Rahnella sp. WP5 | 0.55 | EX31_RS03675 | | transcriptional regulator LeuO | 0.84 | EX31_RS19550 | | ABC transporter permease | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_12575 | | transcriptional regulator LeuO | 0.40 | CSW01_09320 | | amino acid ABC transporter permease | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.23 | Psest_2127 | | Transcriptional regulator | 0.32 | Psest_0136 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | low | > 67 |
| Pseudomonas sp. RS175 | 0.22 | PFR28_01264 | | PCP degradation transcriptional activation protein | 0.62 | PFR28_00505 | | Histidine transport system permease protein HisM | low | > 88 |
| Pseudomonas putida KT2440 | 0.22 | PP_2436 | | Transcriptional regulator, LysR family | 0.38 | PP_4484 | | histidine / lysine / arginine / ornithine ABC transporter - permease subunit | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_2187 | | Transcriptional regulator, LysR family | 0.61 | Pf6N2E2_2960 | | ABC transporter for L-Lysine, permease component 2 (from data) | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.21 | Psyr_2473 | | transcriptional regulator, LysR family | 0.64 | Psyr_3876 | | amino acid ABC transporter membrane protein 2, PAAT family | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.21 | Pf1N1B4_3992 | | Transcriptional regulator, LysR family | 0.64 | Pf1N1B4_3177 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.21 | AO356_01560 | | LysR family transcriptional regulator | 0.62 | AO356_05505 | | ABC transporter for L-Lysine, permease component 2 (from data) | low | > 104 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.21 | Psyr_2473 | | transcriptional regulator, LysR family | 0.64 | Psyr_3876 | | amino acid ABC transporter membrane protein 2, PAAT family | low | > 86 |
| Pseudomonas simiae WCS417 | 0.21 | PS417_16995 | | LysR family transcriptional regulator | 0.63 | PS417_06405 | | amino acid ABC transporter permease | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.21 | AO353_20375 | | LysR family transcriptional regulator | 0.64 | AO353_25650 | | amino acid ABC transporter permease | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.21 | PFLU_RS18945 | | LysR family transcriptional regulator | 0.62 | PFLU_RS06470 | | ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.21 | PFLU_RS18945 | | LysR family transcriptional regulator | 0.62 | PFLU_RS06470 | | ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.21 | PfGW456L13_2596 | | Transcriptional regulator, LysR family | 0.62 | PfGW456L13_385 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | low | > 87 |
| Marinobacter adhaerens HP15 | 0.20 | HP15_1665 | | transcriptional regulator, LysR family | 0.38 | HP15_3033 | | amino acid ABC transporter, inner membrane subunit | low | > 73 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.20 | GFF4425 | | Transcriptional regulator, LysR family | 0.32 | GFF4693 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | low | > 90 |
| Pseudomonas sp. S08-1 | 0.20 | OH686_00880 | | Transcriptional regulator, LysR family | 0.42 | OH686_21265 | | Arginine/ornithine ABC transporter, permease protein AotM | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.20 | RR42_RS30005 | | LysR family transcriptional regulator | 0.64 | RR42_RS29655 | | amino acid ABC transporter permease | low | > 128 |
| Agrobacterium fabrum C58 | 0.19 | Atu5084 | | LysR family transcriptional regulator | 0.31 | Atu6025 | | ABC transporter, membrane spanning protein (nopaline) | low | > 89 |
| Paraburkholderia sabiae LMG 24235 | 0.19 | QEN71_RS33090 | | LysR family transcriptional regulator | 0.70 | QEN71_RS24875 | | ABC transporter permease | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.19 | H281DRAFT_03847 | | transcriptional regulator, LysR family | 0.71 | H281DRAFT_00222 | | amino acid ABC transporter membrane protein 2, PAAT family | low | > 103 |
| Sinorhizobium meliloti 1021 | 0.19 | SMa0307 | | LysR family transcriptional regulator | 0.30 | SMa0492 | | ABC transporter permease | low | > 103 |
| Azospirillum sp. SherDot2 | 0.18 | MPMX19_03531 | | PCP degradation transcriptional activation protein | 0.33 | MPMX19_03639 | | Octopine transport system permease protein OccM | low | > 112 |
| Paraburkholderia graminis OAS925 | 0.18 | ABIE53_004542 | | DNA-binding transcriptional LysR family regulator | 0.66 | ABIE53_001766 | | histidine transport system permease protein | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.18 | BPHYT_RS30310 | | LysR family transcriptional regulator | 0.70 | BPHYT_RS05500 | | histidine/lysine/arginine/ornithine ABC transporter permease HisM | — | — |
| Pantoea sp. MT58 | 0.17 | IAI47_19555 | | LysR family transcriptional regulator | 0.91 | IAI47_06295 | | ABC transporter permease | low | > 76 |
| Azospirillum brasilense Sp245 | 0.17 | AZOBR_RS27530 | | LysR family transcriptional regulator | 0.33 | AZOBR_RS00675 | | ABC transporter permease | low | > 97 |
| Dickeya dadantii 3937 | 0.15 | DDA3937_RS21355 | | LysR family transcriptional regulator | 0.81 | DDA3937_RS14415 | | ABC transporter permease | low | > 74 |
| Castellaniella sp019104865 MT123 | 0.14 | ABCV34_RS11570 | | LysR family transcriptional regulator | 0.61 | ABCV34_RS02175 | | histidine ABC transporter permease HisM | low | > 48 |
| Pectobacterium carotovorum WPP14 | 0.13 | HER17_RS04190 | | LysR family transcriptional regulator | 0.82 | HER17_RS07040 | | ABC transporter permease | low | > 75 |
| Dinoroseobacter shibae DFL-12 | 0.09 | Dshi_2347 | | transcriptional regulator, LysR family (RefSeq) | 0.25 | Dshi_2224 | | polar amino acid ABC transporter, inner membrane subunit (RefSeq) | low | > 64 |
Not shown: 21 genomes with orthologs for ECD_00078 only; 4 genomes with orthologs for ECD_02232 only