| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_02179 | | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent | 1.0 | ECD_00061 | | RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase | 0.76 | 14 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_01458 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 1.00 | OHPLBJKB_03599 | | RNA polymerase-associated protein RapA | low | > 74 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_13535 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 1.00 | BNILDI_08460 | rapA | RNA polymerase-associated protein RapA | low | > 75 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_14620 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 1.00 | NOLOHH_03145 | rapA | RNA polymerase-associated protein RapA | low | > 76 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_22210 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 1.00 | HEPCGN_08790 | rapA | RNA polymerase-associated protein RapA | 0.66 | 3 |
| Escherichia coli BW25113 | 0.99 | b2253 | arnB | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) | 1.00 | b0059 | hepA | ATP-dependent helicase HepA (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.97 | ECOLIN_RS13125 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 1.00 | ECOLIN_RS00315 | | RNA polymerase-associated protein RapA | low | > 55 |
| Escherichia coli ECRC98 | 0.95 | JDDGAC_26960 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 1.00 | JDDGAC_14395 | rapA | RNA polymerase-associated protein RapA | low | > 87 |
| Escherichia coli ECRC102 | 0.95 | NIAGMN_20765 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 1.00 | NIAGMN_08650 | rapA | RNA polymerase-associated protein RapA | low | > 80 |
| Escherichia coli ECRC99 | 0.95 | KEDOAH_05200 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 1.00 | KEDOAH_17355 | rapA | RNA polymerase-associated protein RapA | — | — |
| Escherichia coli ECRC101 | 0.95 | MCAODC_14035 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 1.00 | MCAODC_01315 | rapA | RNA polymerase-associated protein RapA | low | > 88 |
| Escherichia coli ECRC100 | 0.95 | OKFHMN_22995 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 1.00 | OKFHMN_10800 | rapA | RNA polymerase-associated protein RapA | 0.72 | 17 |
| Escherichia fergusonii Becca | 0.95 | EFB2_01603 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 1.00 | EFB2_03986 | | RNA polymerase-associated protein RapA | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.84 | GFF1858 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) | 0.94 | GFF183 | | RNA polymerase associated protein RapA (EC 3.6.1.-) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.81 | MPMX20_04380 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 0.92 | MPMX20_00753 | | RNA polymerase-associated protein RapA | low | > 85 |
| Enterobacter asburiae PDN3 | 0.81 | EX28DRAFT_4082 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | 0.92 | EX28DRAFT_3651 | | Superfamily II DNA/RNA helicases, SNF2 family | low | > 76 |
| Klebsiella pneumoniae MKP103 | 0.80 | KDGMDA_07345 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.92 | KDGMDA_12795 | | RNA polymerase-associated protein RapA | low | > 95 |
| Klebsiella michiganensis M5al | 0.79 | BWI76_RS26485 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 0.92 | BWI76_RS04570 | | RNA polymerase-associated protein RapA | low | > 92 |
| Erwinia tracheiphila HP pepo 2.2 | 0.78 | IJEDHG_02605 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.83 | IJEDHG_06075 | | RNA polymerase-associated protein RapA | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.78 | LU632_RS16495 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.83 | LU632_RS02805 | rapA | RNA polymerase-associated protein RapA | low | > 74 |
| Dickeya dadantii 3937 | 0.78 | DDA3937_RS21390 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.79 | DDA3937_RS18235 | | RNA polymerase-associated protein RapA | low | > 74 |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS22610 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.78 | DZA65_RS19310 | | RNA polymerase-associated protein RapA | low | > 75 |
| Erwinia amylovora T8 | 0.77 | OLJFJH_17365 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.84 | OLJFJH_01340 | | RNA polymerase-associated protein RapA | low | > 58 |
| Dickeya dianthicola 67-19 | 0.77 | HGI48_RS21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.78 | HGI48_RS18170 | | RNA polymerase-associated protein RapA | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS06520 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.78 | HER17_RS02990 | | RNA polymerase-associated protein RapA | low | > 75 |
| Serratia liquefaciens MT49 | 0.71 | IAI46_11015 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.84 | IAI46_03275 | | RNA polymerase-associated protein RapA | low | > 86 |
| Pantoea sp. MT58 | 0.71 | IAI47_21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.84 | IAI47_16055 | | RNA polymerase-associated protein RapA | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.71 | PagCFBP13505_RS12240 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.84 | PagCFBP13505_RS12940 | | RNA polymerase-associated protein RapA | low | > 74 |
| Rahnella sp. WP5 | 0.70 | EX31_RS14020 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.80 | EX31_RS03745 | | RNA polymerase-associated protein RapA | low | > 89 |
| Pseudomonas fluorescens FW300-N2E3 | 0.69 | AO353_25530 | | UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase | 0.48 | AO353_17155 | | RNA polymerase-associated protein RapA | 0.29 | 97 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.63 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | 0.48 | Psyr_3842 | | SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.63 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | 0.48 | Psyr_3842 | | SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit | low | > 86 |
| Pseudomonas aeruginosa PA14 | 0.63 | IKLFDK_18130 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.48 | IKLFDK_16965 | | RNA polymerase-associated protein RapA | low | > 100 |
| Rhodanobacter sp. FW510-T8 | 0.35 | OKGIIK_10755 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | 0.33 | OKGIIK_09865 | rapA | RNA polymerase-associated protein RapA | low | > 52 |
| Pseudomonas lactucae CFBP13502 | 0.31 | GEMAOFIL_05587 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 0.48 | GEMAOFIL_01492 | | RNA polymerase-associated protein RapA | low | > 93 |
| Pseudomonas simiae WCS417 | 0.31 | PS417_27245 | | aminotransferase DegT | 0.47 | PS417_06645 | | RNA polymerase-associated protein RapA | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.31 | PFLU_RS28905 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.48 | PFLU_RS06675 | | RNA polymerase-associated protein RapA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.31 | PFLU_RS28905 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.48 | PFLU_RS06675 | | RNA polymerase-associated protein RapA | low | > 109 |
| Pseudomonas sp. DMC3 | 0.29 | GFF2433 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | 0.48 | GFF2193 | | RNA polymerase-associated protein RapA | low | > 89 |
| Pseudomonas stutzeri RCH2 | 0.29 | Psest_1811 | | UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase | 0.48 | Psest_1327 | | Superfamily II DNA/RNA helicases, SNF2 family | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_3586 | | DegT/DnrJ/EryC1/StrS aminotransferase | 0.48 | Pf1N1B4_3224 | | RNA polymerase associated protein RapA (EC 3.6.1.-) | low | > 87 |
| Pseudomonas sp. RS175 | 0.29 | PFR28_00919 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | 0.48 | PFR28_00612 | | RNA polymerase-associated protein RapA | — | — |
| Marinobacter adhaerens HP15 | 0.28 | HP15_2398 | | aminotransferase, DegT/DnrJ/EryC1/StrS family | 0.39 | HP15_3376 | | RNA polymerase-associated protein RapA | — | — |
| Shewanella sp. ANA-3 | 0.27 | Shewana3_1303 | | polysaccharide biosynthesis protein (RefSeq) | 0.60 | Shewana3_0574 | | ATP-dependent helicase HepA (RefSeq) | low | > 73 |
| Pseudomonas fluorescens FW300-N2E2 | 0.27 | Pf6N2E2_2610 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | 0.48 | Pf6N2E2_2845 | | RNA polymerase associated protein RapA (EC 3.6.1.-) | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.26 | PfGW456L13_4370 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | 0.48 | PfGW456L13_4599 | | RNA polymerase associated protein RapA (EC 3.6.1.-) | low | > 87 |
| Shewanella loihica PV-4 | 0.25 | Shew_1319 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | 0.59 | Shew_0457 | | ATP-dependent helicase HepA (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.25 | MIT1002_01078 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | 0.44 | MIT1002_00659 | | RNA polymerase-associated protein RapA | low | > 70 |
| Shewanella oneidensis MR-1 | 0.24 | SO3270 | | polysaccharide biosynthesis protein (NCBI ptt file) | 0.59 | SO0575 | hepA | RNA polymerase-associated protein HepA (NCBI ptt file) | low | > 76 |
| Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_03400 | | aminotransferase DegT | 0.48 | AO356_04975 | | RNA polymerase-associated protein RapA | low | > 104 |
| Pseudomonas sp. BP01 | 0.23 | JOY50_RS13140 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | 0.48 | JOY50_RS24235 | rapA | RNA polymerase-associated protein RapA | low | > 84 |
| Dyella japonica UNC79MFTsu3.2 | 0.21 | ABZR86_RS18520 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.32 | ABZR86_RS09245 | | RNA polymerase-associated protein RapA | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.20 | LRK54_RS05160 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.33 | LRK54_RS02885 | | RNA polymerase-associated protein RapA | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.20 | LRK55_RS04940 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.33 | LRK55_RS02635 | | RNA polymerase-associated protein RapA | low | > 63 |
| Acinetobacter radioresistens SK82 | 0.19 | MPMX26_00061 | | GDP-perosamine synthase | 0.38 | MPMX26_01027 | | RNA polymerase-associated protein RapA | low | > 36 |
| Rhodanobacter sp000427505 FW510-R12 | 0.18 | LRK53_RS00475 | | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.33 | LRK53_RS07105 | | RNA polymerase-associated protein RapA | low | > 59 |
| Acinetobacter baumannii LAC-4 | 0.17 | RR41_RS18630 | | LegC family aminotransferase | 0.38 | RR41_RS05200 | | RNA polymerase-associated protein RapA | — | — |
Not shown: 43 genomes with orthologs for ECD_02179 only; 5 genomes with orthologs for ECD_00061 only