Conservation of cofitness between DZA65_RS12330 and DZA65_RS20655 in Dickeya dianthicola ME23

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS12330 TetR family transcriptional regulator 1.0 DZA65_RS20655 aspartate aminotransferase family protein 0.37 18
Dickeya dianthicola 67-19 0.95 HGI48_RS11790 TetR family transcriptional regulator 0.99 HGI48_RS19570 aspartate aminotransferase family protein low > 71
Pectobacterium carotovorum WPP14 0.70 HER17_RS16470 TetR/AcrR family transcriptional regulator 0.86 HER17_RS01910 aspartate aminotransferase family protein low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF2284 transcriptional regulator, TetR family 0.32 GFF3420 Acetylornithine aminotransferase (EC 2.6.1.11) low > 90
Castellaniella sp019104865 MT123 0.25 ABCV34_RS11390 TetR/AcrR family transcriptional regulator 0.34 ABCV34_RS12095 acetylornithine transaminase
Dechlorosoma suillum PS 0.25 Dsui_0327 transcriptional regulator 0.35 Dsui_0023 acetylornithine/succinylornithine aminotransferase low > 51
Shewanella amazonensis SB2B 0.24 Sama_1816 TetR family transcriptional regulator (RefSeq) 0.64 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) low > 62
Shewanella loihica PV-4 0.23 Shew_2052 TetR family transcriptional regulator (RefSeq) 0.64 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) low > 60
Caulobacter crescentus NA1000 0.22 CCNA_02161 TetR-family transcriptional regulator 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_02161 TetR-family transcriptional regulator 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase low > 67
Marinobacter adhaerens HP15 0.22 HP15_2262 transcriptional Regulator, TetR family protein 0.60 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) low > 73
Lysobacter sp. OAE881 0.22 ABIE51_RS09405 TetR family transcriptional regulator 0.48 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase low > 62
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_2232 transcriptional regulator, TetR family 0.63 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family low > 40
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.2739.1 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.45 Xcc-8004.1117.1 hypothetical protein 0.52 19
Shewanella sp. ANA-3 0.20 Shewana3_2155 TetR family transcriptional regulator (RefSeq) 0.64 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.20 SO2493 transcriptional regulator, TetR family (NCBI ptt file) 0.64 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.48 38
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS00060 TetR/AcrR family transcriptional regulator 0.45 LRK54_RS06590 acetylornithine/succinylornithine family transaminase low > 59
Rhodanobacter denitrificans MT42 0.20 LRK55_RS18055 TetR/AcrR family transcriptional regulator 0.47 LRK55_RS06335 acetylornithine/succinylornithine family transaminase low > 63
Pseudomonas simiae WCS417 0.19 PS417_16745 TetR family transcriptional regulator 0.66 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data)
Pseudomonas fluorescens SBW25 0.19 PFLU_RS18755 TetR/AcrR family transcriptional regulator 0.66 PFLU_RS23315 aspartate aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS18755 TetR/AcrR family transcriptional regulator 0.66 PFLU_RS23315 aspartate aminotransferase family protein low > 109
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_07150 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA 0.44 OKGIIK_17070 astC acetylornithine transaminase low > 52
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_3282 transcriptional regulator, TetR family 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_3282 transcriptional regulator, TetR family 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme low > 86
Pseudomonas stutzeri RCH2 0.18 Psest_2645 Transcriptional regulator 0.65 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family low > 67
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_08745 TetR/AcrR family transcriptional regulator 0.63 CSW01_13250 aspartate aminotransferase family protein low > 62
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_4033 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.66 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) low > 87
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_3911 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.65 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) low > 87
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_00460 TetR family transcriptional regulator 0.65 AO353_03025 acetylornithine aminotransferase low > 101
Pseudomonas putida KT2440 0.18 PP_2144 Transcriptional regulator, TetR family 0.67 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase low > 96
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_02290 TetR family transcriptional regulator 0.67 AO356_18725 acetylornithine aminotransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_2282 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.67 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) low > 103
Pseudomonas sp. RS175 0.18 PFR28_01118 hypothetical protein 0.65 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase low > 88
Acidovorax sp. GW101-3H11 0.17 Ac3H11_3712 Transcriptional regulator, TetR family 0.33 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11)
Pseudomonas sp. S08-1 0.17 OH686_21965 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.67 OH686_21290 Succinylornithine transaminase low > 80
Rhodopseudomonas palustris CGA009 0.17 TX73_017010 TetR/AcrR family transcriptional regulator 0.41 TX73_024810 aspartate aminotransferase family protein
Brevundimonas sp. GW460-12-10-14-LB2 0.17 A4249_RS14405 TetR/AcrR family transcriptional regulator 0.37 A4249_RS11925 aspartate aminotransferase family protein
Alteromonas macleodii MIT1002 0.17 MIT1002_01970 Stress response protein YttP 0.64 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase low > 70
Variovorax sp. OAS795 0.16 ABID97_RS03175 TetR/AcrR family transcriptional regulator 0.31 ABID97_RS08635 aspartate aminotransferase family protein
Variovorax sp. SCN45 0.15 GFF3420 Transcriptional regulator, AcrR family 0.32 GFF3927 N-acetylornithine aminotransferase (EC 2.6.1.11)

Not shown: 0 genomes with orthologs for DZA65_RS12330 only; 61 genomes with orthologs for DZA65_RS20655 only