Conservation of cofitness between DDA3937_RS15930 and DDA3937_RS15840 in Dickeya dadantii 3937

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dadantii 3937 1.0 DDA3937_RS15930 DNA/RNA nuclease SfsA 1.0 DDA3937_RS15840 sulfate ABC transporter permease subunit CysW 0.61 11
Dickeya dianthicola 67-19 0.97 HGI48_RS16045 DNA/RNA nuclease SfsA 0.90 HGI48_RS15980 sulfate ABC transporter permease subunit CysW low > 71
Dickeya dianthicola ME23 0.97 DZA65_RS17130 DNA/RNA nuclease SfsA 0.91 DZA65_RS17065 sulfate ABC transporter permease subunit CysW low > 75
Pectobacterium carotovorum WPP14 0.70 HER17_RS05585 DNA/RNA nuclease SfsA 0.86 HER17_RS05680 sulfate ABC transporter permease subunit CysW low > 75
Rahnella sp. WP5 0.68 EX31_RS03245 DNA/RNA nuclease SfsA 0.46 EX31_RS20215 sulfate/thiosulfate ABC transporter permease CysW low > 89
Serratia liquefaciens MT49 0.68 IAI46_21205 DNA/RNA nuclease SfsA 0.46 IAI46_18500 sulfate/thiosulfate ABC transporter permease CysW low > 86
Enterobacter sp. TBS_079 0.67 MPMX20_00832 Sugar fermentation stimulation protein A 0.46 MPMX20_03315 Sulfate transport system permease protein CysW low > 85
Escherichia coli BL21 0.66 ECD_00145 sugar fermentation stimulation protein A 0.47 ECD_02323 sulfate/thiosulfate ABC transporter permease low > 61
Escherichia coli BW25113 0.66 b0146 sfsA sugar fermentation stimulation protein A (NCBI) 0.47 b2423 cysW sulfate/thiosulfate transporter subunit (NCBI) low > 76
Escherichia coli ECRC98 0.66 JDDGAC_13935 sfsA DNA/RNA nuclease SfsA 0.47 JDDGAC_26110 cysW sulfate/thiosulfate ABC transporter permease CysW low > 86
Escherichia coli ECRC101 0.66 MCAODC_00855 sfsA DNA/RNA nuclease SfsA 0.47 MCAODC_12690 cysW sulfate/thiosulfate ABC transporter permease CysW low > 87
Escherichia coli ECOR27 0.66 NOLOHH_02685 sfsA DNA/RNA nuclease SfsA 0.47 NOLOHH_13840 cysW sulfate/thiosulfate ABC transporter permease CysW low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03516 Sugar fermentation stimulation protein A 0.47 OHPLBJKB_01300 Sulfate transport system permease protein CysW low > 73
Escherichia coli ECRC102 0.66 NIAGMN_08190 sfsA DNA/RNA nuclease SfsA 0.47 NIAGMN_19930 cysW sulfate/thiosulfate ABC transporter permease CysW
Escherichia coli ECRC99 0.66 KEDOAH_17815 sfsA DNA/RNA nuclease SfsA 0.47 KEDOAH_06060 cysW sulfate/thiosulfate ABC transporter permease CysW
Escherichia coli ECRC100 0.66 OKFHMN_10340 sfsA DNA/RNA nuclease SfsA 0.47 OKFHMN_22160 cysW sulfate/thiosulfate ABC transporter permease CysW low > 80
Escherichia coli ECRC62 0.66 BNILDI_08985 sfsA DNA/RNA nuclease SfsA 0.47 BNILDI_12705 cysW sulfate/thiosulfate ABC transporter permease CysW low > 75
Escherichia coli ECOR38 0.66 HEPCGN_08290 sfsA DNA/RNA nuclease SfsA 0.47 HEPCGN_21335 cysW sulfate/thiosulfate ABC transporter permease CysW low > 87
Klebsiella michiganensis M5al 0.66 BWI76_RS05020 sugar fermentation stimulation protein SfsA 0.47 BWI76_RS20695 sulfate/thiosulfate transporter permease subunit low > 92
Escherichia coli Nissle 1917 0.65 ECOLIN_RS00820 DNA/RNA nuclease SfsA 0.47 ECOLIN_RS13910 sulfate/thiosulfate ABC transporter permease CysW
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3735 sugar fermentation stimulation protein 0.47 EX28DRAFT_0207 sulfate ABC transporter, permease protein CysW low > 76
Pantoea sp. MT58 0.65 IAI47_15630 DNA/RNA nuclease SfsA 0.45 IAI47_05395 sulfate/thiosulfate ABC transporter permease CysW low > 76
Escherichia fergusonii Becca 0.65 EFB2_03898 Sugar fermentation stimulation protein A 0.47 EFB2_01454 Sulfate transport system permease protein CysW low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF86 Sugar/maltose fermentation stimulation protein homolog 0.47 GFF2057 Sulfate transport system permease protein CysW low > 78
Erwinia tracheiphila SCR3 0.64 LU632_RS20075 sfsA DNA/RNA nuclease SfsA 0.46 LU632_RS06685 cysW sulfate/thiosulfate ABC transporter permease CysW low > 74
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_03160 DNA/RNA nuclease SfsA 0.40 CSW01_02860 sulfate ABC transporter permease subunit CysW low > 62
Shewanella oneidensis MR-1 0.54 SO0875 sfsA sugar fermentation stimulation protein (NCBI ptt file) 0.52 SO4654 cysW-2 sulfate ABC transporter, permease protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.54 Shewana3_3403 sugar fermentation stimulation protein A (RefSeq) 0.41 Shewana3_3191 sulfate ABC transporter, inner membrane subunit CysW (RefSeq) low > 73
Marinobacter adhaerens HP15 0.47 HP15_333 sugar fermentation stimulation protein-like protein 0.44 HP15_1346 sulfate ABC transporter, inner membrane subunit CysW low > 73
Pseudomonas putida KT2440 0.45 PP_4691 sugar fermentation stimulation protein A 0.65 PP_5169 sulfate ABC transporter, inner membrane subunit CysW low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0837 Sugar fermentation stimulation protein 0.65 Psyr_0082 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0837 Sugar fermentation stimulation protein 0.65 Psyr_0082 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5162 Sugar/maltose fermentation stimulation protein homolog 0.62 Pf6N2E2_4003 Sulfate transport system permease protein CysW low > 103
Pseudomonas sp. RS175 0.44 PFR28_03712 Sugar fermentation stimulation protein A 0.62 PFR28_04764 Sulfate transport system permease protein CysW low > 88
Dechlorosoma suillum PS 0.44 Dsui_0297 sugar fermentation stimulation protein 0.51 Dsui_0259 sulfate ABC transporter, permease protein CysW low > 51
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_16105 XRE family transcriptional regulator 0.62 AO356_10675 sulfate ABC transporter permease low > 104
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.62 PFLU_RS00955 sulfate ABC transporter permease subunit CysW low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.62 PFLU_RS00955 sulfate ABC transporter permease subunit CysW low > 109
Pseudomonas sp. S08-1 0.42 OH686_17290 sugar fermentation stimulation protein 0.60 OH686_11680 sulfate ABC transporter, permease protein CysW low > 80
Pseudomonas simiae WCS417 0.42 PS417_23865 XRE family transcriptional regulator 0.62 PS417_00940 sulfate ABC transporter permease low > 88
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2864 Sugar/maltose fermentation stimulation protein homolog 0.61 Pf1N1B4_1725 Sulfate transport system permease protein CysW low > 87
Pseudomonas stutzeri RCH2 0.42 Psest_1005 sugar fermentation stimulation protein 0.61 Psest_4062 sulfate ABC transporter, permease protein CysW low > 67
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1530 Sugar/maltose fermentation stimulation protein homolog 0.62 PfGW456L13_484 Sulfate transport system permease protein CysW low > 87
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_14430 XRE family transcriptional regulator 0.62 AO353_11550 sulfate ABC transporter permease low > 101
Magnetospirillum magneticum AMB-1 0.41 AMB_RS08095 DNA/RNA nuclease SfsA 0.49 AMB_RS10135 sulfate ABC transporter permease subunit CysW low > 64
Azospirillum brasilense Sp245 0.36 AZOBR_RS04410 XRE family transcriptional regulator 0.57 AZOBR_RS19275 sulfate/thiosulfate transporter permease subunit low > 97
Agrobacterium fabrum C58 0.36 Atu1605 sugar fermentation stimulation protein 0.56 Atu0822 ABC transporter, membrane spanning protein low > 89
Azospirillum sp. SherDot2 0.35 MPMX19_00188 Sugar fermentation stimulation protein A 0.56 MPMX19_04168 Sulfate transport system permease protein CysW low > 112
Rhodospirillum rubrum S1H 0.33 Rru_A0735 Sugar fermentation stimulation protein (NCBI) 0.52 Rru_A3402 sulfate ABC transporter, permease protein CysW (NCBI)
Sinorhizobium meliloti 1021 0.32 SMc00297 sugar fermentation stimulation protein A 0.51 SM_b21131 sulfate ABC transporter permease low > 103
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_2040 sfsA sugar fermentation stimulation protein A 0.44 Synpcc7942_1685 cysW Sulphate transport system permease protein 2 low > 38
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_02757 sugar fermentation stimulation protein A 0.50 CCNA_01669 sulfate transport system permease protein cysW low > 67
Caulobacter crescentus NA1000 0.29 CCNA_02757 sugar fermentation stimulation protein A 0.50 CCNA_01669 sulfate transport system permease protein cysW low > 66

Not shown: 7 genomes with orthologs for DDA3937_RS15930 only; 16 genomes with orthologs for DDA3937_RS15840 only