| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12735 | | RidA family protein | 1.0 | CSW01_18635 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.89 | 11 |
| Escherichia coli Nissle 1917 | 0.81 | ECOLIN_RS24615 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | ECOLIN_RS11990 | | NADP-dependent phosphogluconate dehydrogenase | low | > 55 |
| Escherichia coli BL21 | 0.81 | ECD_04111 | | enamine/imine deaminase, reaction intermediate detoxification | 0.52 | ECD_01931 | | 6-phosphogluconate dehydrogenase, decarboxylating | low | > 61 |
| Escherichia coli ECRC101 | 0.81 | MCAODC_02380 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | MCAODC_20470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.73 | 13 |
| Escherichia coli ECRC62 | 0.81 | BNILDI_07375 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | BNILDI_14695 | gndA | NADP-dependent phosphogluconate dehydrogenase | low | > 75 |
| Escherichia coli ECRC99 | 0.81 | KEDOAH_16280 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | KEDOAH_03680 | gndA | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Escherichia coli ECRC102 | 0.81 | NIAGMN_09725 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | NIAGMN_22415 | gndA | NADP-dependent phosphogluconate dehydrogenase | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.81 | OHPLBJKB_03791 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | OHPLBJKB_01659 | | 6-phosphogluconate dehydrogenase, decarboxylating | low | > 74 |
| Escherichia coli BW25113 | 0.81 | b4243 | yjgF | orf, hypothetical protein (VIMSS) | 0.52 | b2029 | gnd | 6-phosphogluconate dehydrogenase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.81 | HEPCGN_10070 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | HEPCGN_03175 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.41 | 76 |
| Escherichia coli ECRC98 | 0.81 | JDDGAC_15515 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | JDDGAC_28580 | gndA | NADP-dependent phosphogluconate dehydrogenase | low | > 87 |
| Escherichia fergusonii Becca | 0.81 | EFB2_04290 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | EFB2_01826 | | 6-phosphogluconate dehydrogenase, decarboxylating | low | > 86 |
| Escherichia coli ECOR27 | 0.81 | NOLOHH_04135 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | NOLOHH_15785 | gndA | NADP-dependent phosphogluconate dehydrogenase | low | > 75 |
| Escherichia coli ECRC100 | 0.81 | OKFHMN_11875 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | OKFHMN_24470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.73 | 18 |
| Enterobacter sp. TBS_079 | 0.79 | MPMX20_00542 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.51 | MPMX20_03014 | | 6-phosphogluconate dehydrogenase, decarboxylating | low | > 85 |
| Pantoea sp. MT58 | 0.78 | IAI47_16870 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.50 | IAI47_07035 | | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Klebsiella pneumoniae MKP103 | 0.78 | KDGMDA_11455 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | KDGMDA_26195 | | NADP-dependent phosphogluconate dehydrogenase | low | > 94 |
| Klebsiella pneumoniae MRSN742743 | 0.78 | GJGHJB_04488 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | GJGHJB_01667 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.28 | 12 |
| Klebsiella michiganensis M5al | 0.78 | BWI76_RS02985 | | reactive intermediate/imine deaminase | 0.52 | BWI76_RS19025 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | low | > 92 |
| Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_3444 | | reactive intermediate/imine deaminase | 0.51 | EX28DRAFT_0529 | | 6-phosphogluconate dehydrogenase (decarboxylating) | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.77 | PagCFBP13516_RS17090 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.50 | PagCFBP13516_RS07425 | gndA | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.76 | GFF928 | | Endoribonuclease L-PSP | 0.51 | GFF3903 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | low | > 78 |
| Dickeya dianthicola ME23 | 0.75 | DZA65_RS01960 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.53 | DZA65_RS07180 | | NADP-dependent phosphogluconate dehydrogenase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.74 | HGI48_RS01890 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | HGI48_RS06840 | | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Dickeya dadantii 3937 | 0.74 | DDA3937_RS01915 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | DDA3937_RS06805 | | NADP-dependent phosphogluconate dehydrogenase | low | > 74 |
| Erwinia amylovora T8 | 0.74 | OLJFJH_07320 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.51 | OLJFJH_12140 | | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Rahnella sp. WP5 | 0.74 | EX31_RS12775 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | EX31_RS11475 | | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.73 | IJEDHG_14050 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.50 | IJEDHG_19020 | gndA | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS20960 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.50 | LU632_RS08890 | gndA | NADP-dependent phosphogluconate dehydrogenase | low | > 73 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS19520 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | HER17_RS14505 | | NADP-dependent phosphogluconate dehydrogenase | low | > 75 |
| Serratia liquefaciens MT49 | 0.69 | IAI46_02265 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.52 | IAI46_08160 | | NADP-dependent phosphogluconate dehydrogenase | low | > 87 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.50 | BT1336 | | putative translation initiation inhibitor (NCBI ptt file) | 0.51 | BT1222 | | 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) | low | > 81 |
| Bacteroides ovatus ATCC 8483 | 0.50 | BACOVA_00589 | | putative endoribonuclease L-PSP | 0.52 | BACOVA_00509 | | phosphogluconate dehydrogenase (decarboxylating) | low | > 96 |
| Cellulophaga baltica 18 | 0.48 | M666_RS12150 | | RidA family protein | 0.42 | M666_RS18130 | | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Bacteroides stercoris CC31F | 0.48 | HMPREF1181_RS10885 | | RidA family protein | 0.54 | HMPREF1181_RS12525 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.54 | 11 |
| Phocaeicola vulgatus CL09T03C04 | 0.48 | HMPREF1058_RS18400 | | RidA family protein | 0.50 | HMPREF1058_RS18025 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.47 | ABI39_RS14715 | | RidA family protein | 0.51 | ABI39_RS14350 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | low | > 72 |
| Synechococcus elongatus PCC 7942 | 0.46 | Synpcc7942_0972 | | YjgF-like protein | 0.48 | Synpcc7942_0039 | gnd | 6-phosphogluconate dehydrogenase | low | > 38 |
| Synechocystis sp000284455 PCC 6803 | 0.46 | SGL_RS16325 | | RidA family protein | 0.48 | SGL_RS12985 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | low | > 52 |
| Methylophilus sp. DMC18 | 0.46 | GFF1301 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.48 | GFF2795 | | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating | low | > 43 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS11845 | | RidA family protein | 0.52 | ABZR86_RS13330 | | NADP-dependent phosphogluconate dehydrogenase | low | > 74 |
| Parabacteroides merdae CL09T00C40 | 0.45 | HMPREF1078_RS02020 | | RidA family protein | 0.58 | HMPREF1078_RS08640 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | low | > 61 |
| Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS32435 | | dfrA | 0.41 | AZOBR_RS15725 | | 6-phosphogluconate dehydrogenase | low | > 97 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.43 | CA265_RS22825 | | reactive intermediate/imine deaminase | 0.42 | CA265_RS09805 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | low | > 88 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.43 | Echvi_1327 | | endoribonuclease L-PSP, putative | 0.65 | Echvi_4222 | | 6-phosphogluconate dehydrogenase, decarboxylating | low | > 79 |
| Shewanella sp. ANA-3 | 0.41 | Shewana3_2971 | | putative endoribonuclease L-PSP (RefSeq) | 0.42 | Shewana3_1677 | | 6-phosphogluconate dehydrogenase (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.41 | Shew_3500 | | putative endoribonuclease L-PSP (RefSeq) | 0.42 | Shew_2561 | | 6-phosphogluconate dehydrogenase (RefSeq) | low | > 60 |
| Paraburkholderia sabiae LMG 24235 | 0.40 | QEN71_RS41190 | | RidA family protein | 0.53 | QEN71_RS20525 | | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Shewanella oneidensis MR-1 | 0.39 | SO1404 | | endoribonuclease L-PSP, putative (NCBI ptt file) | 0.40 | SO1902 | gnd | 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.39 | Sama_0263 | | YjgF-like protein (RefSeq) | 0.43 | Sama_1365 | | 6-phosphogluconate dehydrogenase (RefSeq) | low | > 62 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.39 | ABZR88_RS17245 | | RidA family protein | 0.44 | ABZR88_RS02970 | | NADP-dependent phosphogluconate dehydrogenase | — | — |
| Alteromonas macleodii MIT1002 | 0.37 | MIT1002_00109 | | Putative reactive intermediate deaminase TdcF | 0.42 | MIT1002_02397 | | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating | low | > 70 |
| Variovorax sp. SCN45 | 0.31 | GFF6707 | | RidA/YER057c/UK114 superfamily protein | 0.51 | GFF2954 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | low | > 127 |
| Variovorax sp. OAS795 | 0.31 | ABID97_RS22895 | | RidA family protein | 0.51 | ABID97_RS10190 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | low | > 91 |
| Bifidobacterium breve UCC2003 | 0.29 | BBR_RS12070 | | endoribonuclease L-PSP | 0.45 | BBR_RS11465 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | — | — |
| Paraburkholderia graminis OAS925 | 0.26 | ABIE53_004706 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.51 | ABIE53_005122 | | 6-phosphogluconate dehydrogenase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.25 | H281DRAFT_03549 | | reactive intermediate/imine deaminase | 0.52 | H281DRAFT_03046 | | 6-phosphogluconate dehydrogenase (decarboxylating) | low | > 103 |
| Rhizobium sp. OAE497 | 0.25 | ABIE40_RS21405 | | RidA family protein | 0.43 | ABIE40_RS11035 | | NADP-dependent phosphogluconate dehydrogenase | low | > 107 |
Not shown: 47 genomes with orthologs for CSW01_12735 only; 4 genomes with orthologs for CSW01_18635 only