Conservation of cofitness between CSW01_14910 and CSW01_14320 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14910 cold-shock protein 1.0 CSW01_14320 deoxyribodipyrimidine photo-lyase 0.40 20
Kangiella aquimarina DSM 16071 0.79 B158DRAFT_1310 Cold shock proteins 0.37 B158DRAFT_0621 Deoxyribodipyrimidine photolyase low > 40
Marinobacter adhaerens HP15 0.74 HP15_861 cold shock, CspA 0.39 HP15_715 deoxyribodipyrimidine photolyase low > 73
Shewanella loihica PV-4 0.74 Shew_1614 cold-shock DNA-binding domain-containing protein (RefSeq) 0.43 Shew_1479 deoxyribodipyrimidine photo-lyase (RefSeq) — —
Shewanella oneidensis MR-1 0.73 SO2787 cold shock domain family protein (NCBI ptt file) 0.43 SO3384 phrB deoxyribodipyrimidine photolyase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.73 Shewana3_2569 cold-shock DNA-binding protein family protein (RefSeq) 0.43 Shewana3_1166 deoxyribodipyrimidine photo-lyase type I (RefSeq) — —
Shewanella amazonensis SB2B 0.71 Sama_1970 cold-shock DNA-binding domain-containing protein (RefSeq) 0.40 Sama_0811 deoxyribodipyrimidine photo-lyase (RefSeq) — —
Acinetobacter radioresistens SK82 0.70 MPMX26_01347 Cold shock protein CspV 0.39 MPMX26_01004 Deoxyribodipyrimidine photo-lyase low > 36
Pseudomonas aeruginosa PUPa3 0.70 DQ20_RS37050 cold-shock protein 0.41 DQ20_RS55565 phrB;inference=COORDINATES deoxyribodipyrimidine photo-lyase low > 101
Pseudomonas aeruginosa PA14 0.70 IKLFDK_23150 cold-shock protein 0.40 IKLFDK_00195 deoxyribodipyrimidine photo-lyase low > 98
Pseudomonas aeruginosa MRSN321 0.70 DY961_RS22270 cold-shock protein 0.41 DY961_RS29130 phrB;inference=COORDINATES deoxyribodipyrimidine photo-lyase low > 100
Lysobacter sp. OAE881 0.70 ABIE51_RS18590 cold-shock protein 0.26 ABIE51_RS09260 deoxyribodipyrimidine photo-lyase — —
Pseudomonas stutzeri RCH2 0.69 Psest_1615 Cold shock proteins 0.39 Psest_2397 Deoxyribodipyrimidine photolyase — —
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS21685 cold-shock protein 0.38 PFLU_RS03715 deoxyribodipyrimidine photo-lyase low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS21685 cold-shock protein 0.38 PFLU_RS03715 deoxyribodipyrimidine photo-lyase low > 109
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS00525 cold-shock protein 0.28 ABZR86_RS01855 deoxyribodipyrimidine photo-lyase — —
Pseudomonas sp. SVBP6 0.68 COO64_RS19570 cold-shock protein 0.36 COO64_RS03260 phrB deoxyribodipyrimidine photo-lyase low > 93
Pseudomonas sp. DMC3 0.67 GFF5172 Major cold shock protein CspA 0.37 GFF4479 Deoxyribodipyrimidine photo-lyase low > 89
Pseudomonas sp. S08-1 0.67 OH686_17410 Cold shock protein of CSP family 0.38 OH686_07850 Deoxyribodipyrimidine photolyase — —
Pseudomonas segetis P6 0.67 MPMX49_03475 Major cold shock protein CspA 0.37 MPMX49_01348 Deoxyribodipyrimidine photo-lyase 0.41 64
Pseudomonas putida KT2440 0.67 PP_1522 major cold shock protein 0.37 PP_0739 deoxyribodipyrimidine photolyase low > 96
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_16395 cold-shock protein 0.39 AO353_14820 deoxyribodipyrimidine photolyase — —
Pseudomonas orientalis W4I3 0.67 QF045_RS08985 cold-shock protein 0.39 QF045_RS06645 deoxyribodipyrimidine photo-lyase low > 93
Rhodanobacter denitrificans MT42 0.66 LRK55_RS14490 cold-shock protein 0.23 LRK55_RS07250 deoxyribodipyrimidine photo-lyase low > 63
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_624 Cold shock protein CspA 0.38 Pf1N1B4_2927 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) — —
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_18155 cold-shock protein 0.37 AO356_16530 deoxyribodipyrimidine photolyase low > 104
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS14775 cold-shock protein 0.23 LRK54_RS07510 DNA photolyase family protein low > 59
Pseudomonas simiae WCS417 0.66 PS417_06370 cold-shock protein 0.38 PS417_03665 deoxyribodipyrimidine photolyase low > 88
Pseudomonas sp. RS175 0.66 PFR28_03386 Major cold shock protein CspA 0.38 PFR28_03648 Deoxyribodipyrimidine photo-lyase low > 88
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_2967 Cold shock protein CspA 0.38 Pf6N2E2_5228 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 103
Pseudomonas sp. BP01 0.66 JOY50_RS26120 cold-shock protein 0.37 JOY50_RS19560 phrB deoxyribodipyrimidine photo-lyase low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3884 cold-shock DNA-binding protein family 0.38 Psyr_0961 deoxyribodipyrimidine photo-lyase type I — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3884 cold-shock DNA-binding protein family 0.38 Psyr_0961 deoxyribodipyrimidine photo-lyase type I — —
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_4642 Cold shock protein CspA 0.37 PfGW456L13_1589 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 87
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_03600 cspC cold-shock protein 0.26 OKGIIK_13930 Deoxyribodipyrimidine photolyase low > 53
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.2268.1 hypothetical protein 0.25 Xcc-8004.3484.1 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) — —
Acinetobacter baumannii LAC-4 0.63 RR41_RS06300 cold-shock protein 0.37 RR41_RS05085 deoxyribodipyrimidine photo-lyase low > 55
Pedobacter sp. GW460-11-11-14-LB5 0.47 CA265_RS06265 cold-shock protein 0.28 CA265_RS17545 deoxyribodipyrimidine photolyase low > 88
Rhodopseudomonas palustris CGA009 0.45 TX73_015795 cold-shock protein 0.26 TX73_016440 deoxyribodipyrimidine photo-lyase low > 86

Not shown: 3 genomes with orthologs for CSW01_14910 only; 65 genomes with orthologs for CSW01_14320 only