Conservation of cofitness between CSW01_03850 and CSW01_14215 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt 1.0 CSW01_14215 DUF839 domain-containing protein 0.47 7
Shewanella amazonensis SB2B 0.84 Sama_2193 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.28 Sama_1749 hypothetical protein (RefSeq) low > 62
Pantoea sp. MT58 0.84 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.53 IAI47_16100 PhoX family phosphatase low > 76
Pantoea agglomerans CFBP13505 P0401 0.83 PagCFBP13505_RS10390 tRNA guanosine(34) transglycosylase Tgt 0.54 PagCFBP13505_RS12895 PhoX family phosphatase low > 74
Shewanella sp. ANA-3 0.83 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.28 Shewana3_1995 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.82 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) 0.28 SO2385 conserved hypothetical protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.82 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.56 IAI46_03230 PhoX family phosphatase low > 87
Pseudomonas sp. S08-1 0.71 OH686_17430 tRNA-guanine transglycosylase 0.35 OH686_13020 Putative phosphatase low > 80
Marinobacter adhaerens HP15 0.70 HP15_1479 queuine tRNA-ribosyltransferase 0.31 HP15_2571 twin-arginine translocation pathway signal low > 73
Pseudomonas stutzeri RCH2 0.70 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 0.38 Psest_2412 Predicted phosphatase low > 67
Pseudomonas aeruginosa PA14 0.70 IKLFDK_19685 tRNA guanosine(34) transglycosylase Tgt 0.35 IKLFDK_13230 Tat pathway signal protein low > 98
Pseudomonas aeruginosa MRSN321 0.70 DY961_RS13805 tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34 tRNA guanosine(34) transglycosylase Tgt 0.35 DY961_RS04040 PhoX family phosphatase low > 100
Pseudomonas aeruginosa PUPa3 0.70 DQ20_RS43295 tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34 tRNA guanosine(34) transglycosylase Tgt 0.35 DQ20_RS35070 PhoX family phosphatase low > 101
Pseudomonas sp. RS175 0.69 PFR28_00277 Queuine tRNA-ribosyltransferase 0.59 PFR28_04106 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_15790 queuine tRNA-ribosyltransferase 0.57 AO353_07540 transcriptional initiation protein Tat — —
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_3006 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.58 Pf1N1B4_2482 Putative phosphatase low > 87
Pseudomonas putida KT2440 0.69 PP_0833 queuine tRNA-ribosyltransferase 0.27 PP_1043 putative phosphatase low > 96
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.57 PfGW456L13_1144 Putative phosphatase low > 87
Acinetobacter baumannii LAC-4 0.69 RR41_RS02925 tRNA guanosine(34) transglycosylase Tgt 0.28 RR41_RS16660 PhoX family phosphatase low > 55
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_06690 queuine tRNA-ribosyltransferase 0.58 AO356_14120 transcriptional initiation protein Tat low > 104
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.59 Pf6N2E2_4756 Putative phosphatase low > 103
Pseudomonas fluorescens SBW25 0.69 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.57 PFLU_RS27665 PhoX family phosphatase low > 109
Pseudomonas segetis P6 0.69 MPMX49_01498 Queuine tRNA-ribosyltransferase 0.56 MPMX49_00756 hypothetical protein low > 75
Pseudomonas simiae WCS417 0.69 PS417_23245 queuine tRNA-ribosyltransferase 0.57 PS417_26020 transcriptional initiation protein Tat — —
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.57 PFLU_RS27665 PhoX family phosphatase low > 109
Pseudomonas sp. BP01 0.68 JOY50_RS22865 tgt tRNA guanosine(34) transglycosylase Tgt 0.27 JOY50_RS11555 PhoX family phosphatase low > 84
Pseudomonas orientalis W4I3 0.68 QF045_RS25465 tRNA guanosine(34) transglycosylase Tgt 0.56 QF045_RS00430 PhoX family phosphatase low > 93
Pseudomonas sp. DMC3 0.68 GFF4359 Queuine tRNA-ribosyltransferase 0.59 GFF79 hypothetical protein low > 89
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_1228 tRNA-guanine transglycosylase 0.57 Psyr_4690 Twin-arginine translocation pathway signal — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_1228 tRNA-guanine transglycosylase 0.57 Psyr_4690 Twin-arginine translocation pathway signal — —
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_04801 Queuine tRNA-ribosyltransferase 0.57 GEMAOFIL_05325 hypothetical protein low > 96
Pseudomonas sp. SVBP6 0.68 COO64_RS03850 tgt tRNA guanosine(34) transglycosylase Tgt 0.58 COO64_RS22740 PhoX family phosphatase low > 93
Dechlorosoma suillum PS 0.67 Dsui_3323 tRNA-guanine transglycosylase, queuosine-34-forming 0.43 Dsui_2668 putative phosphatase low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF2798 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.25 GFF5597 Putative phosphatase 0.33 59
Acidovorax sp. GW101-3H11 0.59 Ac3H11_861 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.26 Ac3H11_1654 Predicted phosphatase low > 79
Variovorax sp. OAS795 0.59 ABID97_RS01595 tRNA guanosine(34) transglycosylase Tgt 0.38 ABID97_RS14440 PhoX family phosphatase low > 91
Variovorax sp. SCN45 0.59 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.40 GFF1045 Putative phosphatase low > 127
Rhodospirillum rubrum S1H 0.54 Rru_A0280 Queuine tRNA-ribosyltransferase (NCBI) 0.33 Rru_A3006 Protein of unknown function DUF839 (NCBI) low > 58
Sphingobium sp. HT1-2 0.51 GFF2323 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.25 GFF3342 Putative phosphatase low > 95
Dinoroseobacter shibae DFL-12 0.51 Dshi_2346 queuine tRNA-ribosyltransferase (RefSeq) 0.30 Dshi_2377 protein of unknown function DUF839 (RefSeq) low > 64
Sinorhizobium meliloti 1021 0.50 SMc01206 queuine tRNA-ribosyltransferase 0.33 SMc02634 hypothetical protein low > 103
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_1017 tRNA-guanine transglycosylase 0.25 Ga0059261_3941 Predicted phosphatase low > 68
Agrobacterium fabrum C58 0.49 Atu1677 queuine tRNA-ribosyltransferase 0.45 Atu4415 hypothetical protein low > 89
Bosea sp. OAE506 0.49 ABIE41_RS18290 tRNA guanosine(34) transglycosylase Tgt 0.33 ABIE41_RS09395 PhoX family phosphatase low > 77
Synechocystis sp000284455 PCC 6803 0.41 SGL_RS16370 tRNA guanosine(34) transglycosylase Tgt 0.12 SGL_RS01275 DUF839 domain-containing protein low > 52

Not shown: 75 genomes with orthologs for CSW01_03850 only; 0 genomes with orthologs for CSW01_14215 only