Conservation of cofitness between CSW01_08705 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.60 20
Rahnella sp. WP5 0.77 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) 0.81 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Escherichia coli ECRC100 0.74 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) low > 79
Escherichia coli ECRC99 0.74 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC101 0.74 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli BW25113 0.74 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) 0.81 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Dickeya dianthicola ME23 0.74 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECOR27 0.74 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 76
Dickeya dadantii 3937 0.74 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC62 0.74 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli ECRC102 0.74 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) low > 80
Escherichia coli ECRC98 0.74 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli Nissle 1917 0.74 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 55
Klebsiella pneumoniae MKP103 0.74 KDGMDA_17970 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 KDGMDA_06970 phosphoenolpyruvate carboxykinase (ATP) low > 95
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 74
Dickeya dianthicola 67-19 0.74 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli BL21 0.74 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase 0.81 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 61
Escherichia fergusonii Becca 0.74 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Enterobacter sp. TBS_079 0.74 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Pantoea agglomerans CFBP13505 P0401 0.74 PagCFBP13505_RS04470 3-phosphoshikimate 1-carboxyvinyltransferase 0.77 PagCFBP13505_RS18350 phosphoenolpyruvate carboxykinase (ATP) — —
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Klebsiella michiganensis M5al 0.73 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_20275 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.78 IJEDHG_11970 pckA phosphoenolpyruvate carboxykinase (ATP) low > 61
Erwinia tracheiphila SCR3 0.73 LU632_RS09795 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.78 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 73
Escherichia coli ECOR38 0.73 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 88
Serratia liquefaciens MT49 0.73 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) 0.59 81
Shewanella sp. ANA-3 0.73 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) low > 73
Pantoea sp. MT58 0.72 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase 0.77 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) — —
Shewanella oneidensis MR-1 0.72 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Erwinia amylovora T8 0.72 OLJFJH_16135 3-phosphoshikimate 1-carboxyvinyltransferase 0.78 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) — —
Shewanella amazonensis SB2B 0.72 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.38 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) low > 62
Pectobacterium carotovorum WPP14 0.72 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Shewanella loihica PV-4 0.71 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.37 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.68 MIT1002_02191 3-phosphoshikimate 1-carboxyvinyltransferase 0.36 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) — —
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS05635 3-phosphoshikimate 1-carboxyvinyltransferase 0.72 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP) — —
Rhizobium sp. OAE497 0.28 ABIE40_RS05420 3-phosphoshikimate 1-carboxyvinyltransferase 0.40 ABIE40_RS19415 phosphoenolpyruvate carboxykinase — —
Phocaeicola dorei CL03T12C01 0.28 ABI39_RS09575 3-phosphoshikimate 1-carboxyvinyltransferase 0.72 ABI39_RS06685 phosphoenolpyruvate carboxykinase (ATP) — —
Bacteroides thetaiotaomicron VPI-5482 0.28 BT2186 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (from data) 0.73 BT2790 phosphoenolpyruvate carboxykinase [ATP] (NCBI ptt file) — —
Phocaeicola vulgatus CL09T03C04 0.28 HMPREF1058_RS13970 3-phosphoshikimate 1-carboxyvinyltransferase 0.72 HMPREF1058_RS10065 phosphoenolpyruvate carboxykinase (ATP) — —
Bacteroides ovatus ATCC 8483 0.28 BACOVA_03157 3-phosphoshikimate 1-carboxyvinyltransferase 0.72 BACOVA_02011 phosphoenolpyruvate carboxykinase (ATP) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_0122 5-enolpyruvylshikimate-3-phosphate synthase 0.42 Echvi_2957 phosphoenolpyruvate carboxykinase (ATP) — —
Bacteroides stercoris CC31F 0.26 HMPREF1181_RS09330 3-phosphoshikimate 1-carboxyvinyltransferase 0.72 HMPREF1181_RS01170 phosphoenolpyruvate carboxykinase (ATP) — —
Agrobacterium fabrum C58 0.26 Atu0642 3-phosphoshikimate 1-carboxyvinyltransferase 0.42 Atu0035 phosphoenolpyruvate carboxykinase — —
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.30 28
Pseudomonas fluorescens SBW25 0.25 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_02820 3-phosphoshikimate 1-carboxyvinyltransferase 0.35 GEMAOFIL_00469 Phosphoenolpyruvate carboxykinase (ATP) low > 96
Pseudomonas orientalis W4I3 0.25 QF045_RS17005 3-phosphoshikimate 1-carboxyvinyltransferase 0.35 QF045_RS04340 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas simiae WCS417 0.25 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase 0.34 PS417_01210 hypothetical protein low > 88
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS11640 3-phosphoshikimate 1-carboxyvinyltransferase 0.41 CA265_RS23490 phosphoenolpyruvate carboxykinase (ATP) — —
Cellulophaga baltica 18 0.24 M666_RS08280 3-phosphoshikimate 1-carboxyvinyltransferase 0.43 M666_RS03005 phosphoenolpyruvate carboxykinase (ATP) — —
Kangiella aquimarina DSM 16071 0.24 B158DRAFT_2432 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.76 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) low > 40
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_13100 3-phosphoshikimate 1-carboxyvinyltransferase 0.44 CA264_05270 phosphoenolpyruvate carboxykinase (ATP) — —
Fusobacterium nucleatum SB010 0.22 HUW76_05445 3-phosphoshikimate 1-carboxyvinyltransferase 0.39 HUW76_06485 phosphoenolpyruvate carboxykinase (ATP) low > 35
Sinorhizobium meliloti 1021 0.16 SMc00333 3-phosphoshikimate 1-carboxyvinyltransferase 0.41 SMc02562 phosphoenolpyruvate carboxykinase — —
Rhodopseudomonas palustris CGA009 0.16 TX73_000320 3-phosphoshikimate 1-carboxyvinyltransferase 0.42 TX73_001865 phosphoenolpyruvate carboxykinase — —
Bosea sp. OAE506 0.15 ABIE41_RS03910 3-phosphoshikimate 1-carboxyvinyltransferase 0.40 ABIE41_RS02665 phosphoenolpyruvate carboxykinase — —
Xanthobacter sp. DMC5 0.15 GFF4571 3-phosphoshikimate 1-carboxyvinyltransferase 0.40 GFF4136 Phosphoenolpyruvate carboxykinase (ATP) — —
Sphingobium sp. HT1-2 0.15 GFF1645 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.40 GFF3825 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Phaeobacter inhibens DSM 17395 0.14 PGA1_c04810 3-phosphoshikimate 1-carboxyvinyltransferase AroA 0.39 PGA1_c01140 phosphoenolpyruvate carboxykinase — —
Dinoroseobacter shibae DFL-12 0.14 Dshi_1022 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.39 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.14 Ga0059261_0167 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.39 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) — —

Not shown: 35 genomes with orthologs for CSW01_08705 only; 16 genomes with orthologs for CSW01_13810 only