Conservation of cofitness between CSW01_03170 and CSW01_13410 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03170 ATP-dependent helicase HrpB 1.0 CSW01_13410 protein-export protein SecB 0.57 12
Serratia liquefaciens MT49 0.46 IAI46_21195 ATP-dependent helicase HrpB 0.69 IAI46_24695 protein-export chaperone SecB low > 87
Erwinia amylovora T8 0.46 OLJFJH_00750 ATP-dependent helicase HrpB 0.68 OLJFJH_05910 protein-export chaperone SecB low > 58
Enterobacter asburiae PDN3 0.44 EX28DRAFT_3737 ATP-dependent helicase HrpB 0.71 EX28DRAFT_3860 protein-export chaperone SecB — —
Rahnella sp. WP5 0.44 EX31_RS03235 ATP-dependent helicase HrpB 0.69 EX31_RS14345 protein-export chaperone SecB low > 89
Escherichia coli ECRC101 0.44 MCAODC_00845 hrpB ATP-dependent helicase HrpB 0.70 MCAODC_06260 secB protein-export chaperone SecB — —
Escherichia coli ECRC99 0.44 KEDOAH_17825 hrpB ATP-dependent helicase HrpB 0.70 KEDOAH_12400 secB protein-export chaperone SecB — —
Erwinia tracheiphila HP pepo 2.2 0.44 IJEDHG_15075 hrpB ATP-dependent RNA helicase HrpB 0.71 IJEDHG_07915 secB protein-export chaperone SecB — —
Escherichia coli ECRC100 0.44 OKFHMN_10330 hrpB ATP-dependent helicase HrpB 0.70 OKFHMN_15750 secB protein-export chaperone SecB — —
Escherichia coli ECRC98 0.44 JDDGAC_13925 hrpB ATP-dependent helicase HrpB 0.70 JDDGAC_19375 secB protein-export chaperone SecB — —
Escherichia coli ECRC102 0.44 NIAGMN_08180 hrpB ATP-dependent helicase HrpB 0.70 NIAGMN_13510 secB protein-export chaperone SecB low > 80
Enterobacter sp. TBS_079 0.44 MPMX20_00834 ATP-dependent RNA helicase HrpB 0.70 MPMX20_00124 Protein-export protein SecB — —
Escherichia coli BL21 0.44 ECD_00147 putative ATP-dependent helicase 0.70 ECD_03467 protein export chaperone — —
Escherichia coli ECOR38 0.44 HEPCGN_08280 hrpB ATP-dependent helicase HrpB 0.70 HEPCGN_14590 secB protein-export chaperone SecB — —
Escherichia fergusonii Becca 0.44 EFB2_03896 ATP-dependent RNA helicase HrpB 0.70 EFB2_00201 Protein-export protein SecB — —
Klebsiella pneumoniae MKP103 0.44 KDGMDA_13285 ATP-dependent helicase HrpB 0.72 KDGMDA_07900 protein-export chaperone SecB low > 94
Escherichia coli Nissle 1917 0.44 ECOLIN_RS00830 ATP-dependent helicase HrpB 0.70 ECOLIN_RS20600 protein-export chaperone SecB — —
Klebsiella michiganensis M5al 0.44 BWI76_RS05030 ATP-dependent helicase 0.72 BWI76_RS27215 protein-export protein SecB — —
Escherichia coli BW25113 0.43 b0148 hrpB helicase, ATP-dependent (VIMSS) 0.70 b3609 secB export protein SecB (NCBI) low > 76
Klebsiella pneumoniae MRSN742743 0.43 GJGHJB_04134 hrpB ATP-dependent helicase HrpB 0.72 GJGHJB_00161 secB protein-export chaperone SecB — —
Escherichia coli ECRC62 0.43 BNILDI_08995 hrpB ATP-dependent helicase HrpB 0.70 BNILDI_03885 secB protein-export chaperone SecB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF84 ATP-dependent helicase HrpB 0.71 GFF401 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03514 hypothetical protein 0.70 OHPLBJKB_00090 Protein-export protein SecB — —
Pectobacterium carotovorum WPP14 0.43 HER17_RS05595 ATP-dependent helicase HrpB 0.68 HER17_RS20740 protein-export chaperone SecB low > 75
Escherichia coli ECOR27 0.43 NOLOHH_02675 hrpB ATP-dependent helicase HrpB 0.70 NOLOHH_07630 secB protein-export chaperone SecB low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS16035 ATP-dependent helicase HrpB 0.69 HGI48_RS00790 protein-export chaperone SecB low > 71
Dickeya dadantii 3937 0.43 DDA3937_RS15920 ATP-dependent helicase HrpB 0.70 DDA3937_RS20410 protein-export chaperone SecB low > 74
Dickeya dianthicola ME23 0.43 DZA65_RS17120 ATP-dependent helicase HrpB 0.69 DZA65_RS00845 protein-export chaperone SecB low > 75
Pantoea sp. MT58 0.41 IAI47_15620 ATP-dependent helicase HrpB 0.70 IAI47_00735 protein-export chaperone SecB low > 76
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13516_RS15935 hrpB ATP-dependent helicase HrpB 0.70 PagCFBP13516_RS00725 secB protein-export chaperone SecB low > 80
Shewanella oneidensis MR-1 0.39 SO0632 hrpB ATP-dependent helicase HrpB (NCBI ptt file) 0.65 SO0052 secB protein-export protein SecB (NCBI ptt file) — —
Shewanella sp. ANA-3 0.38 Shewana3_0622 ATP-dependent helicase HrpB (RefSeq) 0.66 Shewana3_0053 preprotein translocase subunit SecB (RefSeq) — —
Pseudomonas sp. S08-1 0.37 OH686_08800 ATP-dependent helicase HrpB 0.57 OH686_14670 protein-export chaperone SecB low > 80
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_5038 ATP-dependent helicase HrpB 0.59 Pf6N2E2_3829 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 103
Pseudomonas simiae WCS417 0.37 PS417_24550 ATP-dependent helicase 0.60 PS417_01620 preprotein translocase subunit SecB low > 88
Shewanella amazonensis SB2B 0.37 Sama_2972 ATP-dependent helicase HrpB (RefSeq) 0.68 Sama_0062 preprotein translocase subunit SecB (RefSeq) — —
Marinobacter adhaerens HP15 0.37 HP15_3782 RNA helicase, ATP-dependent DEAH box, HrpB type 0.52 HP15_3003 protein-export protein SecB low > 73
Pseudomonas protegens RBAN4 0.36 FABNJH_27350 hrpB ATP-dependent helicase HrpB 0.55 FABNJH_01950 secB protein-export chaperone SecB — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS26480 ATP-dependent helicase HrpB 0.60 PFLU_RS01670 protein-export chaperone SecB low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS26480 ATP-dependent helicase HrpB 0.60 PFLU_RS01670 protein-export chaperone SecB low > 109
Pseudomonas stutzeri RCH2 0.36 Psest_0629 ATP-dependent helicase HrpB 0.56 Psest_0165 protein-export chaperone SecB low > 67
Pseudomonas orientalis W4I3 0.36 QF045_RS26835 ATP-dependent helicase HrpB 0.60 QF045_RS04690 protein-export chaperone SecB low > 93
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_05058 ATP-dependent RNA helicase HrpB 0.60 GEMAOFIL_00544 Protein-export protein SecB low > 96
Pseudomonas sp. SVBP6 0.36 COO64_RS15435 hrpB ATP-dependent helicase HrpB 0.56 COO64_RS13310 secB protein-export chaperone SecB low > 91
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_1395 ATP-dependent helicase HrpB 0.57 PfGW456L13_350 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 87
Pseudomonas sp. RS175 0.36 PFR28_03833 ATP-dependent RNA helicase HrpB 0.59 PFR28_04941 Protein-export protein SecB low > 88
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_15485 ATP-dependent helicase 0.58 AO356_09755 preprotein translocase subunit SecB low > 104
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_06300 ATP-dependent helicase 0.57 AO353_12130 preprotein translocase subunit SecB low > 101
Pseudomonas sp. BP01 0.35 JOY50_RS21795 hrpB ATP-dependent helicase HrpB 0.56 JOY50_RS09435 secB protein-export chaperone SecB — —
Pseudomonas putida KT2440 0.35 PP_4772 ATP-dependent helicase HrpB 0.55 PP_5053 Protein-export protein SecB low > 96
Pseudomonas sp. DMC3 0.35 GFF3915 ATP-dependent RNA helicase HrpB 0.59 GFF4086 Protein-export protein SecB low > 89
Pseudomonas segetis P6 0.35 ACVTMO_RS05405 hrpB ATP-dependent helicase HrpB 0.59 ACVTMO_RS21280 secB protein-export chaperone SecB low > 75
Shewanella loihica PV-4 0.35 Shew_3124 ATP-dependent helicase HrpB (RefSeq) 0.67 Shew_3804 preprotein translocase subunit SecB (RefSeq) — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2728 ATP-dependent helicase HrpB 0.57 Pf1N1B4_1614 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4320 ATP-dependent helicase HrpB 0.58 Psyr_4882 protein translocase subunit secB low > 86
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4320 ATP-dependent helicase HrpB 0.58 Psyr_4882 protein translocase subunit secB low > 86
Rhodopseudomonas palustris CGA009 0.34 TX73_002770 ATP-dependent helicase HrpB 0.25 TX73_001570 protein-export chaperone SecB low > 86
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_16270 hrpA HrpA-like RNA helicase 0.44 OKGIIK_13020 secB protein-export chaperone SecB low > 53
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_2125 ATP-dependent helicase HrpB 0.30 Ga0059261_0802 protein-export chaperone SecB low > 68

Not shown: 28 genomes with orthologs for CSW01_03170 only; 14 genomes with orthologs for CSW01_13410 only