| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_01015 | | DNA helicase II | 1.0 | CSW01_12335 | | outer membrane protein TolC | 0.81 | 7 |
| Escherichia coli BW25113 | 0.71 | b3813 | uvrD | DNA-dependent ATPase I and helicase II (NCBI) | 0.42 | b3035 | tolC | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | low | > 76 |
| Escherichia coli ECRC62 | 0.71 | BNILDI_04995 | uvrD | DNA helicase II | 0.42 | BNILDI_00905 | tolC | outer membrane channel protein TolC | low | > 75 |
| Escherichia coli ECOR27 | 0.71 | NOLOHH_06540 | uvrD | DNA helicase II | 0.42 | NOLOHH_10610 | tolC | outer membrane channel protein TolC | low | > 75 |
| Escherichia coli ECRC101 | 0.71 | MCAODC_04915 | uvrD | DNA helicase II | 0.42 | MCAODC_09320 | tolC | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.71 | OHPLBJKB_04237 | | DNA helicase II | 0.42 | OHPLBJKB_00668 | | Outer membrane protein TolC | low | > 74 |
| Escherichia coli ECRC98 | 0.71 | JDDGAC_18035 | uvrD | DNA helicase II | 0.42 | JDDGAC_22440 | tolC | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli BL21 | 0.71 | ECD_03689 | | DNA-dependent ATPase I and helicase II | 0.42 | ECD_02907 | | transport channel | — | — |
| Escherichia coli ECRC102 | 0.71 | NIAGMN_12165 | uvrD | DNA helicase II | 0.42 | NIAGMN_16570 | tolC | outer membrane channel protein TolC | low | > 80 |
| Escherichia coli ECRC100 | 0.71 | OKFHMN_14410 | uvrD | DNA helicase II | 0.42 | OKFHMN_18805 | tolC | outer membrane channel protein TolC | low | > 79 |
| Escherichia coli ECRC99 | 0.71 | KEDOAH_13740 | uvrD | DNA helicase II | 0.42 | KEDOAH_09340 | tolC | outer membrane channel protein TolC | — | — |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS01220 | | DNA-dependent helicase II | 0.43 | BWI76_RS24400 | | outer membrane channel protein TolC | low | > 92 |
| Escherichia coli Nissle 1917 | 0.71 | ECOLIN_RS21885 | | DNA helicase II | 0.42 | ECOLIN_RS17515 | | outer membrane channel protein TolC | low | > 55 |
| Escherichia fergusonii Becca | 0.71 | EFB2_04824 | | DNA helicase II | 0.42 | EFB2_00773 | | Outer membrane protein TolC | low | > 86 |
| Serratia liquefaciens MT49 | 0.71 | IAI46_00735 | | DNA helicase II | 0.42 | IAI46_21945 | | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli ECOR38 | 0.71 | HEPCGN_13115 | uvrD | DNA helicase II | 0.42 | HEPCGN_17680 | tolC | outer membrane channel protein TolC | low | > 88 |
| Klebsiella pneumoniae MRSN742743 | 0.71 | GJGHJB_04824 | uvrD | DNA helicase II | 0.43 | GJGHJB_00669 | tolC | outer membrane channel protein TolC | low | > 83 |
| Klebsiella pneumoniae MKP103 | 0.71 | KDGMDA_09710 | | DNA helicase II | 0.43 | KDGMDA_05225 | | outer membrane channel protein TolC | low | > 94 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.71 | GFF241 | | ATP-dependent DNA helicase UvrD/PcrA | 0.43 | GFF3149 | | Type I secretion outer membrane protein, TolC precursor | low | > 78 |
| Enterobacter sp. TBS_079 | 0.70 | MPMX20_04463 | | DNA helicase II | 0.43 | MPMX20_03882 | | Outer membrane protein TolC | low | > 85 |
| Enterobacter asburiae PDN3 | 0.70 | EX28DRAFT_4482 | | ATP-dependent DNA helicase UvrD (EC 3.6.1.-) | 0.43 | EX28DRAFT_3073 | | type I secretion outer membrane protein, TolC family | low | > 76 |
| Dickeya dadantii 3937 | 0.70 | DDA3937_RS19880 | | DNA helicase II | 0.42 | DDA3937_RS01740 | | outer membrane channel protein TolC | low | > 74 |
| Dickeya dianthicola 67-19 | 0.70 | HGI48_RS20035 | | DNA helicase II | 0.42 | HGI48_RS01635 | | outer membrane channel protein TolC | low | > 71 |
| Dickeya dianthicola ME23 | 0.70 | DZA65_RS21080 | | DNA helicase II | 0.42 | DZA65_RS01710 | | outer membrane channel protein TolC | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.70 | HER17_RS01360 | | DNA helicase II | 0.43 | HER17_RS19825 | | outer membrane channel protein TolC | low | > 75 |
| Pantoea sp. MT58 | 0.69 | IAI47_18390 | | DNA helicase II | 0.43 | IAI47_03135 | | outer membrane channel protein TolC | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.68 | LU632_RS24125 | uvrD | DNA helicase II | 0.41 | LU632_RS20635 | tolC | outer membrane channel protein TolC | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.68 | PagCFBP13516_RS18650 | uvrD | DNA helicase II | 0.43 | PagCFBP13516_RS03375 | tolC | outer membrane channel protein TolC | low | > 80 |
| Erwinia tracheiphila HP pepo 2.2 | 0.68 | IJEDHG_08770 | uvrD | DNA helicase II | 0.41 | IJEDHG_14425 | tolC | outer membrane channel protein TolC | — | — |
| Rahnella sp. WP5 | 0.68 | EX31_RS15175 | | DNA helicase II | 0.42 | EX31_RS08100 | | outer membrane channel protein TolC | low | > 89 |
| Erwinia amylovora T8 | 0.68 | OLJFJH_06425 | | DNA helicase II | 0.41 | OLJFJH_07675 | | outer membrane channel protein TolC | low | > 58 |
| Shewanella sp. ANA-3 | 0.67 | Shewana3_0469 | uvrD | DNA-dependent helicase II (RefSeq) | 0.47 | Shewana3_0725 | tolC | outer membrane channel protein (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.67 | SO0467 | uvrD | DNA helicase II (NCBI ptt file) | 0.47 | SO3904 | tolC | outer membrane protein TolC (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.66 | Sama_0419 | uvrD | DNA-dependent helicase II (RefSeq) | 0.44 | Sama_3048 | tolC | outer membrane channel protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.66 | Shew_3385 | uvrD | DNA-dependent helicase II (RefSeq) | 0.45 | Shew_0544 | tolC | outer membrane channel protein (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.65 | MIT1002_00153 | | DNA helicase II | 0.44 | MIT1002_00670 | | Outer membrane protein TolC precursor | low | > 70 |
| Pseudomonas aeruginosa MRSN321 | 0.60 | PFGADD_05702 | uvrD | DNA helicase II | 0.29 | PFGADD_05210 | opmH | efflux transporter outer membrane subunit OpmH | low | > 99 |
| Pseudomonas aeruginosa PA14 | 0.60 | IKLFDK_26200 | | DNA helicase II | 0.29 | IKLFDK_28670 | | efflux transporter outer membrane subunit OpmH | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.60 | NPBIFN_05778 | uvrD | DNA helicase II | 0.29 | NPBIFN_05286 | opmH | efflux transporter outer membrane subunit OpmH | low | > 101 |
| Pseudomonas putida KT2440 | 0.60 | PP_5352 | | DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex | 0.28 | PP_4923 | | Outer membrane efflux protein | low | > 96 |
| Pseudomonas sp. BP01 | 0.60 | JOY50_RS08735 | uvrD | DNA helicase II | 0.28 | JOY50_RS10060 | | TolC family outer membrane protein | low | > 84 |
| Pseudomonas sp. SVBP6 | 0.60 | COO64_RS01845 | uvrD | DNA helicase II | 0.27 | COO64_RS17750 | | TolC family outer membrane protein | low | > 91 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS29900 | | DNA helicase II | 0.28 | PFLU_RS02425 | | TolC family outer membrane protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS29900 | | DNA helicase II | 0.28 | PFLU_RS02425 | | TolC family outer membrane protein | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.59 | QF045_RS02600 | | DNA helicase II | 0.28 | QF045_RS05410 | | TolC family outer membrane protein | low | > 93 |
| Pseudomonas sp. FW215-L2 | 0.59 | GFF2984 | | DNA helicase II | 0.29 | GFF2350 | | Outer membrane protein TolC | — | — |
| Pseudomonas lactucae CFBP13502 | 0.59 | GEMAOFIL_00116 | | DNA helicase II | 0.28 | GEMAOFIL_00707 | | Outer membrane protein TolC | low | > 96 |
| Pseudomonas sp. DMC3 | 0.59 | GFF512 | | DNA helicase II | 0.26 | GFF3182 | | Outer membrane protein TolC | low | > 89 |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_10055 | | DNA helicase II | 0.28 | AO353_13005 | | channel protein TolC | low | > 101 |
| Pseudomonas sp. S08-1 | 0.59 | OH686_13045 | | ATP-dependent DNA helicase UvrD/PcrA | 0.28 | OH686_15890 | | Outer membrane channel TolC (OpmH) | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.59 | Psest_4098 | | Superfamily I DNA and RNA helicases | 0.29 | Psest_0476 | | type I secretion outer membrane protein, TolC family | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_724 | | ATP-dependent DNA helicase UvrD/PcrA | 0.27 | PfGW456L13_188 | | Type I secretion outer membrane protein, TolC precursor | low | > 87 |
| Pseudomonas protegens RBAN4 | 0.59 | FABNJH_31090 | uvrD | DNA helicase II | 0.29 | FABNJH_02785 | tolC | Outer membrane channel TolC (OpmH) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_2005 | | ATP-dependent DNA helicase UvrD/PcrA | 0.28 | Pf1N1B4_1448 | | Type I secretion outer membrane protein, TolC precursor | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_4273 | | ATP-dependent DNA helicase UvrD/PcrA | 0.29 | Pf6N2E2_3645 | | Type I secretion outer membrane protein, TolC precursor | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_11990 | | DNA helicase II | 0.29 | AO356_08815 | | channel protein TolC | low | > 104 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_04523 | | DNA helicase II | 0.28 | PFR28_05090 | | Outer membrane protein TolC | low | > 88 |
| Kangiella aquimarina DSM 16071 | 0.58 | B158DRAFT_0238 | | Superfamily I DNA and RNA helicases | 0.28 | B158DRAFT_0973 | | type I secretion outer membrane protein, TolC family | low | > 40 |
| Pseudomonas segetis P6 | 0.58 | ACVTMO_RS00885 | uvrD | DNA helicase II | 0.29 | ACVTMO_RS20760 | | TolC family outer membrane protein | low | > 75 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_5065 | | ATP-dependent DNA helicase UvrD | 0.29 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_5065 | | ATP-dependent DNA helicase UvrD | 0.29 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Marinobacter adhaerens HP15 | 0.56 | HP15_3403 | | UvrD/REP helicase | 0.26 | HP15_451 | | type I secretion outer membrane protein, TolC family | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.55 | ABZR86_RS16965 | | DNA helicase II | 0.26 | ABZR86_RS17210 | | TolC family outer membrane protein | low | > 74 |
| Rhodanobacter sp000427505 FW510-R12 | 0.53 | LRK53_RS01560 | | UvrD-helicase domain-containing protein | 0.25 | LRK53_RS01735 | | TolC family outer membrane protein | — | — |
| Methylophilus sp. DMC18 | 0.48 | GFF1664 | | DNA helicase II | 0.26 | GFF2824 | | Outer membrane protein TolC | low | > 43 |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS09150 | | UvrD-helicase domain-containing protein | 0.26 | ABID97_RS21375 | | TolC family outer membrane protein | low | > 91 |
Not shown: 49 genomes with orthologs for CSW01_01015 only; 1 genomes with orthologs for CSW01_12335 only