| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12600 | | 3-isopropylmalate dehydrogenase | 1.0 | CSW01_11780 | | exodeoxyribonuclease V subunit beta | 0.62 | 20 |
| Rahnella sp. WP5 | 0.79 | EX31_RS03685 | | 3-isopropylmalate dehydrogenase | 0.29 | EX31_RS20735 | | exodeoxyribonuclease V subunit beta | low | > 89 |
| Serratia liquefaciens MT49 | 0.79 | IAI46_03350 | | 3-isopropylmalate dehydrogenase | 0.40 | IAI46_20405 | | exodeoxyribonuclease V subunit beta | — | — |
| Pectobacterium carotovorum WPP14 | 0.78 | HER17_RS03080 | | 3-isopropylmalate dehydrogenase | 0.40 | HER17_RS16525 | | exodeoxyribonuclease V subunit beta | low | > 75 |
| Dickeya dianthicola 67-19 | 0.78 | HGI48_RS18060 | | 3-isopropylmalate dehydrogenase | 0.31 | HGI48_RS11100 | | exodeoxyribonuclease V subunit beta | — | — |
| Dickeya dadantii 3937 | 0.78 | DDA3937_RS18120 | | 3-isopropylmalate dehydrogenase | 0.30 | DDA3937_RS11080 | | exodeoxyribonuclease V subunit beta | low | > 74 |
| Dickeya dianthicola ME23 | 0.78 | DZA65_RS19205 | | 3-isopropylmalate dehydrogenase | 0.30 | DZA65_RS11480 | | exodeoxyribonuclease V subunit beta | — | — |
| Klebsiella michiganensis M5al | 0.77 | BWI76_RS04675 | | 3-isopropylmalate dehydrogenase | 0.39 | BWI76_RS23230 | | exodeoxyribonuclease V subunit beta | low | > 92 |
| Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_3669 | | 3-isopropylmalate dehydrogenase | 0.40 | EX28DRAFT_2895 | | DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) | — | — |
| Enterobacter sp. TBS_079 | 0.77 | MPMX20_00768 | | 3-isopropylmalate dehydrogenase | 0.40 | MPMX20_03683 | | RecBCD enzyme subunit RecB | low | > 85 |
| Klebsiella pneumoniae MRSN742743 | 0.77 | GJGHJB_04207 | leuB | 3-isopropylmalate dehydrogenase | 0.39 | GJGHJB_00880 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Klebsiella pneumoniae MKP103 | 0.77 | KDGMDA_12905 | | 3-isopropylmalate dehydrogenase | 0.39 | KDGMDA_03810 | | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC102 | 0.77 | NIAGMN_08570 | leuB | 3-isopropylmalate dehydrogenase | 0.38 | NIAGMN_17820 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli Nissle 1917 | 0.77 | ECOLIN_RS00395 | | 3-isopropylmalate dehydrogenase | 0.38 | ECOLIN_RS15830 | | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC101 | 0.77 | MCAODC_01235 | leuB | 3-isopropylmalate dehydrogenase | 0.38 | MCAODC_10575 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC99 | 0.77 | KEDOAH_17435 | leuB | 3-isopropylmalate dehydrogenase | 0.38 | KEDOAH_08080 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC100 | 0.77 | OKFHMN_10720 | leuB | 3-isopropylmalate dehydrogenase | 0.38 | OKFHMN_20050 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia fergusonii Becca | 0.77 | EFB2_03972 | | 3-isopropylmalate dehydrogenase | 0.38 | EFB2_01064 | | RecBCD enzyme subunit RecB | low | > 86 |
| Escherichia coli ECRC98 | 0.77 | JDDGAC_14315 | leuB | 3-isopropylmalate dehydrogenase | 0.38 | JDDGAC_23715 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECOR38 | 0.77 | HEPCGN_08700 | leuB | 3-isopropylmalate dehydrogenase | 0.39 | HEPCGN_19305 | recB | exodeoxyribonuclease V subunit beta | low | > 88 |
| Escherichia coli BL21 | 0.77 | ECD_00075 | | 3-isopropylmalate dehydrogenase, NAD(+)-dependent | 0.39 | ECD_02668 | | exonuclease V (RecBCD complex), beta subunit | — | — |
| Escherichia coli ECOR27 | 0.77 | NOLOHH_03065 | leuA | 2-isopropylmalate synthase | 0.39 | NOLOHH_11935 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli BW25113 | 0.77 | b0073 | leuB | 3-isopropylmalate dehydrogenase (VIMSS) | 0.39 | b2820 | recB | exonuclease V (RecBCD complex), beta subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.77 | BNILDI_08545 | leuA | 2-isopropylmalate synthase | 0.39 | BNILDI_10415 | recB | exodeoxyribonuclease V subunit beta | low | > 75 |
| Erwinia amylovora T8 | 0.77 | OLJFJH_01290 | | 3-isopropylmalate dehydrogenase | 0.40 | OLJFJH_09100 | | exodeoxyribonuclease V subunit beta | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.77 | GFF165 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.40 | GFF1301 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.77 | OHPLBJKB_03584 | | 3-isopropylmalate dehydrogenase | 0.39 | OHPLBJKB_00910 | | RecBCD enzyme subunit RecB | — | — |
| Erwinia tracheiphila SCR3 | 0.74 | LU632_RS02875 | leuB | 3-isopropylmalate dehydrogenase | 0.39 | LU632_RS06190 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.74 | IJEDHG_06000 | leuB | 3-isopropylmalate dehydrogenase | 0.39 | IJEDHG_17205 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Pantoea sp. MT58 | 0.73 | IAI47_16005 | | 3-isopropylmalate dehydrogenase | 0.41 | IAI47_03965 | | exodeoxyribonuclease V subunit beta | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.73 | PagCFBP13516_RS16315 | leuB | 3-isopropylmalate dehydrogenase | 0.40 | PagCFBP13516_RS04235 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_3760 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.28 | Shewana3_2246 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.71 | SO4235 | leuB | 3-isopropylmalate dehydrogenase (NCBI ptt file) | 0.28 | SO2148 | recB | exodeoxyribonuclease V, beta subunit (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.70 | Shew_3471 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.30 | Shew_2130 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.69 | Sama_0336 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.29 | Sama_1901 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
| Pseudomonas sp. SVBP6 | 0.52 | COO64_RS05650 | leuB | 3-isopropylmalate dehydrogenase | 0.29 | COO64_RS02680 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Pseudomonas sp. BP01 | 0.52 | JOY50_RS16615 | leuB | 3-isopropylmalate dehydrogenase | 0.29 | JOY50_RS27635 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Pseudomonas putida KT2440 | 0.51 | PP_1988 | | 3-isopropylmalate dehydrogenase | 0.30 | PP_4673 | | Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_12 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.28 | Pf1N1B4_1235 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas aeruginosa MRSN321 | 0.51 | PFGADD_01847 | leuB | 3-isopropylmalate dehydrogenase | 0.27 | PFGADD_04482 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.51 | NPBIFN_01884 | leuB | 3-isopropylmalate dehydrogenase | 0.27 | NPBIFN_04541 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Pseudomonas aeruginosa PA14 | 0.51 | IKLFDK_15865 | | 3-isopropylmalate dehydrogenase | 0.27 | IKLFDK_02690 | | exodeoxyribonuclease V subunit beta | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_20635 | | 3-isopropylmalate dehydrogenase | 0.29 | AO353_06045 | | exodeoxyribonuclease V subunit beta | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_66 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.28 | Pf6N2E2_3460 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | low | > 103 |
| Marinobacter adhaerens HP15 | 0.51 | HP15_1832 | | 3-isopropylmalate dehydrogenase | 0.26 | HP15_3713 | | exodeoxyribonuclease V, beta subunit | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.51 | PFLU_RS20565 | | 3-isopropylmalate dehydrogenase | 0.29 | PFLU_RS25590 | | exodeoxyribonuclease V subunit beta | — | — |
| Pseudomonas fluorescens SBW25 | 0.51 | PFLU_RS20565 | | 3-isopropylmalate dehydrogenase | 0.29 | PFLU_RS25590 | | exodeoxyribonuclease V subunit beta | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.51 | QF045_RS20725 | | 3-isopropylmalate dehydrogenase | 0.29 | QF045_RS26010 | | exodeoxyribonuclease V subunit beta | low | > 93 |
| Pseudomonas sp. RS175 | 0.51 | PFR28_02821 | | 3-isopropylmalate dehydrogenase | 0.29 | PFR28_00007 | | RecBCD enzyme subunit RecB | low | > 88 |
| Pseudomonas simiae WCS417 | 0.51 | PS417_18585 | | 3-isopropylmalate dehydrogenase | 0.29 | PS417_23775 | | exodeoxyribonuclease V subunit beta | low | > 88 |
| Pseudomonas protegens RBAN4 | 0.51 | FABNJH_10785 | leuB | 3-isopropylmalate dehydrogenase | 0.28 | FABNJH_03835 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_21415 | | 3-isopropylmalate dehydrogenase | 0.28 | AO356_07915 | | exodeoxyribonuclease V subunit beta | low | > 104 |
| Pseudomonas lactucae CFBP13502 | 0.50 | GEMAOFIL_03945 | | 3-isopropylmalate dehydrogenase | 0.29 | GEMAOFIL_04901 | | RecBCD enzyme subunit RecB | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.50 | PfGW456L13_3945 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.29 | PfGW456L13_5151 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas sp. DMC3 | 0.50 | GFF788 | | 3-isopropylmalate dehydrogenase | 0.28 | GFF4913 | | RecBCD enzyme subunit RecB | low | > 89 |
| Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_1985 | | 3-isopropylmalate dehydrogenase | 0.28 | Psyr_0681 | | DNA helicase/exodeoxyribonuclease V, beta subunit | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_1985 | | 3-isopropylmalate dehydrogenase | 0.28 | Psyr_0681 | | DNA helicase/exodeoxyribonuclease V, beta subunit | — | — |
| Paraburkholderia graminis OAS925 | 0.47 | ABIE53_004804 | | 3-isopropylmalate dehydrogenase | 0.27 | ABIE53_000495 | | exodeoxyribonuclease V beta subunit | low | > 113 |
| Dyella japonica UNC79MFTsu3.2 | 0.39 | ABZR86_RS15950 | | 3-isopropylmalate dehydrogenase | 0.27 | ABZR86_RS07665 | | exodeoxyribonuclease V subunit beta | low | > 74 |
Not shown: 66 genomes with orthologs for CSW01_12600 only; 0 genomes with orthologs for CSW01_11780 only