Conservation of cofitness between CSW01_01120 and CSW01_09560 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01120 orotate phosphoribosyltransferase 1.0 CSW01_09560 orotidine-5'-phosphate decarboxylase 0.75 10
Escherichia coli BL21 0.85 ECD_03499 orotate phosphoribosyltransferase 0.68 ECD_01258 orotidine-5'-phosphate decarboxylase 0.81 12
Escherichia coli ECRC62 0.85 BNILDI_04035 pyrE Orotate phosphoribosyltransferase 0.68 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase 0.98 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00060 Orotate phosphoribosyltransferase 0.68 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.73 3
Escherichia coli Nissle 1917 0.85 ECOLIN_RS20750 orotate phosphoribosyltransferase 0.64 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase — —
Escherichia coli BW25113 0.85 b3642 pyrE orotate phosphoribosyltransferase (NCBI) 0.69 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) 0.93 3
Escherichia coli ECOR38 0.84 HEPCGN_14420 pyrE Orotate phosphoribosyltransferase 0.68 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase 0.97 1
Klebsiella michiganensis M5al 0.84 BWI76_RS27385 orotate phosphoribosyltransferase 0.69 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.87 3
Escherichia fergusonii Becca 0.84 EFB2_00171 Orotate phosphoribosyltransferase 0.68 EFB2_02644 Orotidine 5'-phosphate decarboxylase low > 86
Shewanella amazonensis SB2B 0.84 Sama_0321 pyrE orotate phosphoribosyltransferase (RefSeq) 0.65 Sama_1740 orotidine 5'-phosphate decarboxylase (RefSeq) 0.86 4
Klebsiella pneumoniae MKP103 0.84 KDGMDA_08050 Orotate phosphoribosyltransferase 0.68 KDGMDA_19655 orotidine-5'-phosphate decarboxylase low > 95
Shewanella loihica PV-4 0.84 Shew_3487 pyrE orotate phosphoribosyltransferase (RefSeq) 0.66 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) — —
Escherichia coli ECRC98 0.84 JDDGAC_19225 pyrE Orotate phosphoribosyltransferase 0.68 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase low > 87
Escherichia coli ECRC99 0.84 KEDOAH_12550 pyrE Orotate phosphoribosyltransferase 0.68 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC101 0.84 MCAODC_06110 pyrE Orotate phosphoribosyltransferase 0.68 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase 0.81 11
Escherichia coli ECRC100 0.84 OKFHMN_15600 pyrE Orotate phosphoribosyltransferase 0.68 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase 0.85 22
Escherichia coli ECRC102 0.84 NIAGMN_13360 pyrE Orotate phosphoribosyltransferase 0.68 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase 0.82 68
Escherichia coli ECOR27 0.84 NOLOHH_07480 pyrE Orotate phosphoribosyltransferase 0.68 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase 0.95 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF367 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.63 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 0.62 7
Dickeya dadantii 3937 0.83 DDA3937_RS20535 orotate phosphoribosyltransferase 0.64 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.94 1
Shewanella sp. ANA-3 0.83 Shewana3_3776 pyrE orotate phosphoribosyltransferase (RefSeq) 0.64 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) 0.93 4
Enterobacter asburiae PDN3 0.83 EX28DRAFT_3892 orotate phosphoribosyltransferase (EC 2.4.2.10) 0.67 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Enterobacter sp. TBS_079 0.83 MPMX20_00093 Orotate phosphoribosyltransferase 0.68 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.97 2
Shewanella oneidensis MR-1 0.83 SO4255 pyrE orotate phosphoribosyltransferase (NCBI ptt file) 0.64 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) 0.97 3
Pectobacterium carotovorum WPP14 0.82 HER17_RS20850 orotate phosphoribosyltransferase 0.65 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.94 27
Serratia liquefaciens MT49 0.81 IAI46_24845 orotate phosphoribosyltransferase 0.67 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.82 15
Erwinia amylovora T8 0.81 OLJFJH_05770 orotate phosphoribosyltransferase 0.63 OLJFJH_13570 orotidine-5'-phosphate decarboxylase 0.74 5
Rahnella sp. WP5 0.81 EX31_RS14500 orotate phosphoribosyltransferase 0.64 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.92 31
Dickeya dianthicola ME23 0.81 DZA65_RS00735 orotate phosphoribosyltransferase 0.63 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.93 2
Dickeya dianthicola 67-19 0.81 HGI48_RS00680 orotate phosphoribosyltransferase 0.64 HGI48_RS12580 orotidine-5'-phosphate decarboxylase 0.74 6
Erwinia tracheiphila HP pepo 2.2 0.80 IJEDHG_07760 pyrE orotate phosphoribosyltransferase 0.62 IJEDHG_23775 pyrF orotidine-5'-phosphate decarboxylase 0.95 3
Pantoea sp. MT58 0.80 IAI47_00600 orotate phosphoribosyltransferase 0.63 IAI47_09275 orotidine-5'-phosphate decarboxylase 0.97 4
Pantoea agglomerans CFBP13505 P0401 0.80 PagCFBP13505_RS18745 orotate phosphoribosyltransferase 0.64 PagCFBP13505_RS06900 orotidine-5'-phosphate decarboxylase 0.67 19
Erwinia tracheiphila SCR3 0.80 LU632_RS22015 pyrE orotate phosphoribosyltransferase 0.62 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase 0.96 2
Alteromonas macleodii MIT1002 0.77 MIT1002_04070 Orotate phosphoribosyltransferase 0.62 MIT1002_02184 Orotidine 5'-phosphate decarboxylase — —
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0216 orotate phosphoribosyltransferase 0.56 Psyr_1836 orotidine-5'-phosphate decarboxylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0216 orotate phosphoribosyltransferase 0.56 Psyr_1836 orotidine-5'-phosphate decarboxylase — —
Pseudomonas stutzeri RCH2 0.71 Psest_3810 orotate phosphoribosyltransferase 0.57 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 — —
Pseudomonas sp. RS175 0.71 PFR28_04417 Orotate phosphoribosyltransferase 0.57 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 — —
Pseudomonas sp. S08-1 0.70 OH686_13590 Orotate phosphoribosyltransferase 0.55 OH686_00580 Orotidine 5'-phosphate decarboxylase low > 80
Pseudomonas aeruginosa PUPa3 0.69 DQ20_RS49580 pyrE;go_function=orotate orotate phosphoribosyltransferase 0.58 DQ20_RS32985 pyrF;go_function=orotidine-5'-phosphate orotidine-5'-phosphate decarboxylase — —
Pseudomonas aeruginosa MRSN321 0.69 DY961_RS12545 pyrE;go_function=orotate orotate phosphoribosyltransferase 0.58 DY961_RS02610 pyrF;go_function=orotidine-5'-phosphate orotidine-5'-phosphate decarboxylase 0.85 11
Pseudomonas sp. SVBP6 0.69 COO64_RS01495 pyrE orotate phosphoribosyltransferase 0.55 COO64_RS06575 pyrF orotidine-5'-phosphate decarboxylase 0.88 15
Pseudomonas aeruginosa PA14 0.69 IKLFDK_26800 Orotate phosphoribosyltransferase 0.58 IKLFDK_14615 orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4370 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.56 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas segetis P6 0.68 MPMX49_00027 Orotate phosphoribosyltransferase 0.62 MPMX49_01902 Orotidine 5'-phosphate decarboxylase — —
Pseudomonas sp. BP01 0.68 JOY50_RS09035 pyrE orotate phosphoribosyltransferase 0.56 JOY50_RS15880 pyrF orotidine-5'-phosphate decarboxylase — —
Pseudomonas putida KT2440 0.68 PP_5291 Orotate phosphoribosyltransferase 0.54 PP_1815 Orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_09245 orotate phosphoribosyltransferase 0.58 AO353_01670 orotidine 5'-phosphate decarboxylase — —
Pseudomonas sp. DMC3 0.67 GFF411 Orotate phosphoribosyltransferase 0.55 GFF4798 Orotidine 5'-phosphate decarboxylase — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0786 orotate phosphoribosyltransferase (EC 2.4.2.10) 0.63 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas orientalis W4I3 0.67 QF045_RS02150 orotate phosphoribosyltransferase 0.56 QF045_RS11745 orotidine-5'-phosphate decarboxylase — —
Pseudomonas simiae WCS417 0.67 PS417_27795 orotate phosphoribosyltransferase 0.56 PS417_09055 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_12520 orotate phosphoribosyltransferase 0.56 AO356_19850 orotidine 5'-phosphate decarboxylase — —
Pseudomonas lactucae CFBP13502 0.67 GEMAOFIL_00027 Orotate phosphoribosyltransferase 0.56 GEMAOFIL_01940 'Orotidine 5'-phosphate decarboxylase' transl_table=11 — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS29475 orotate phosphoribosyltransferase 0.58 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_788 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.57 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS29475 orotate phosphoribosyltransferase 0.58 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_2120 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.55 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Marinobacter adhaerens HP15 0.63 HP15_298 orotate phosphoribosyltransferase 0.65 HP15_1370 orotidine 5'-phosphate decarboxylase — —
Methylophilus sp. DMC18 0.55 GFF2065 Orotate phosphoribosyltransferase 0.59 GFF737 Orotidine 5'-phosphate decarboxylase — —
Acinetobacter radioresistens SK82 0.53 MPMX26_02937 Orotate phosphoribosyltransferase 0.55 MPMX26_01242 Orotidine 5'-phosphate decarboxylase 0.94 2
Acinetobacter baumannii LAC-4 0.53 RR41_RS00800 orotate phosphoribosyltransferase 0.54 RR41_RS12150 orotidine-5'-phosphate decarboxylase — —
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.4884.1 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.27 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —

Not shown: 20 genomes with orthologs for CSW01_01120 only; 22 genomes with orthologs for CSW01_09560 only