Conservation of cofitness between CSW01_03150 and CSW01_08330 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS 1.0 CSW01_08330 hypothetical protein 0.68 2
Escherichia coli ECOR27 0.53 NOLOHH_02695 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.16 NOLOHH_22655 hlyD secretion protein HlyD low > 76
Escherichia coli BL21 0.53 ECD_00143 glutamyl-Q tRNA(Asp) synthetase 0.16 ECD_00762 putative membrane fusion protein (MFP) component of efflux pump, membrane anchor low > 61
Escherichia coli BW25113 0.53 b0144 yadB glutamyl-Q tRNA(Asp) synthetase (RefSeq) 0.16 b0795 ybhG hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_03518 Glutamyl-Q tRNA(Asp) synthetase 0.16 OHPLBJKB_02918 hypothetical protein low > 74
Escherichia coli ECRC62 0.53 BNILDI_08975 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.16 BNILDI_20935 hlyD secretion protein HlyD low > 75
Escherichia fergusonii Becca 0.53 EFB2_03900 Glutamyl-Q tRNA(Asp) synthetase 0.15 EFB2_03310 hypothetical protein low > 86
Escherichia coli ECRC99 0.53 KEDOAH_17805 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.16 KEDOAH_21610 hlyD secretion protein HlyD — —
Escherichia coli ECRC98 0.53 JDDGAC_13945 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.16 JDDGAC_09935 hlyD secretion protein HlyD low > 87
Escherichia coli ECRC101 0.53 MCAODC_00865 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.16 MCAODC_25515 hlyD secretion protein HlyD low > 88
Escherichia coli Nissle 1917 0.53 ECOLIN_RS00795 tRNA glutamyl-Q(34) synthetase GluQRS 0.15 ECOLIN_RS04235 secretion protein HlyD low > 55
Escherichia coli ECRC100 0.53 OKFHMN_10350 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.16 OKFHMN_06300 hlyD secretion protein HlyD low > 79
Escherichia coli ECRC102 0.53 NIAGMN_08200 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.16 NIAGMN_04345 hlyD secretion protein HlyD low > 80
Escherichia coli ECOR38 0.52 HEPCGN_08300 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.16 HEPCGN_01740 hlyD secretion protein HlyD low > 88
Dickeya dianthicola 67-19 0.52 HGI48_RS16055 tRNA glutamyl-Q(34) synthetase GluQRS 0.11 HGI48_RS08780 secretion protein HlyD low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS17140 tRNA glutamyl-Q(34) synthetase GluQRS 0.14 DZA65_RS09070 secretion protein HlyD low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF88 glutamyl-Q-tRNA synthetase 0.16 GFF694 Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG low > 78
Dickeya dadantii 3937 0.52 DDA3937_RS15940 tRNA glutamyl-Q(34) synthetase GluQRS 0.13 DDA3937_RS08640 secretion protein HlyD low > 74
Serratia liquefaciens MT49 0.51 IAI46_21215 tRNA glutamyl-Q(34) synthetase GluQRS 0.14 IAI46_06610 secretion protein HlyD low > 86
Klebsiella pneumoniae MKP103 0.51 KDGMDA_13265 tRNA glutamyl-Q(34) synthetase GluQRS 0.14 KDGMDA_08070 secretion protein HlyD low > 95
Rahnella sp. WP5 0.50 EX31_RS03255 tRNA glutamyl-Q(34) synthetase GluQRS 0.13 EX31_RS00880 secretion protein HlyD low > 89
Enterobacter sp. TBS_079 0.50 MPMX20_00830 Glutamyl-Q tRNA(Asp) synthetase 0.15 MPMX20_01423 hypothetical protein low > 85
Shewanella loihica PV-4 0.50 Shew_3130 glutamate--tRNA ligase (RefSeq) 0.44 Shew_0427 hypothetical protein (RefSeq) low > 60
Klebsiella michiganensis M5al 0.49 BWI76_RS05010 tRNA glutamyl-Q synthetase 0.14 BWI76_RS08880 secretion protein HlyD 0.15 64
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3733 glutamyl-queuosine tRNA(Asp) synthetase 0.15 EX28DRAFT_2196 Multidrug resistance efflux pump low > 76
Shewanella amazonensis SB2B 0.48 Sama_0779 glutamyl-tRNA synthetase domain-containing protein (RefSeq) 0.35 Sama_3589 HlyD family secretion protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.47 Shewana3_3405 glutamyl-tRNA synthetase, class Ic (RefSeq) 0.30 Shewana3_2750 secretion protein HlyD family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.47 SO0873 glutamyl-tRNA synthetase domain protein (NCBI ptt file) 0.33 SO1705 hypothetical HlyD family secretion protein (NCBI ptt file) low > 76
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_15055 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.13 IJEDHG_07735 HlyD family secretion protein low > 61
Erwinia tracheiphila SCR3 0.47 LU632_RS20085 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.13 LU632_RS22040 HlyD family efflux transporter periplasmic adaptor subunit low > 74
Alteromonas macleodii MIT1002 0.44 MIT1002_03691 Glutamyl-Q tRNA(Asp) synthetase 0.09 MIT1002_00919 Multidrug resistance protein MdtN low > 70
Pseudomonas sp. S08-1 0.40 OH686_17275 glutamyl-queuosine tRNA(Asp) synthetase 0.31 OH686_05800 hypothetical protein low > 80
Dechlorosoma suillum PS 0.37 Dsui_1040 glutamyl-queuosine tRNA(Asp) synthetase 0.09 Dsui_2342 multidrug resistance efflux pump low > 51
Marinobacter adhaerens HP15 0.36 HP15_331 glutamyl-Q tRNA(Asp) synthetase 0.41 HP15_1349 membrane-fusion protein low > 73
Acinetobacter baumannii LAC-4 0.35 RR41_RS17735 tRNA glutamyl-Q(34) synthetase GluQRS 0.14 RR41_RS12545 HlyD family efflux transporter periplasmic adaptor subunit low > 55
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS00575 tRNA glutamyl-Q(34) synthetase GluQRS 0.23 ABZR86_RS09910 HlyD family secretion protein low > 74
Lysobacter sp. OAE881 0.34 ABIE51_RS13520 tRNA glutamyl-Q(34) synthetase GluQRS 0.26 ABIE51_RS15485 HlyD family efflux transporter periplasmic adaptor subunit low > 62
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00309 glutamyl-Q tRNA(Asp) synthetase 0.12 H281DRAFT_03452 HlyD family secretion protein low > 103
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_03640 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.24 OKGIIK_02975 Hemolysin secretion protein D low > 53
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS24480 tRNA glutamyl-Q(34) synthetase GluQRS 0.11 QEN71_RS17405 HlyD family efflux transporter periplasmic adaptor subunit low > 153
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS14820 tRNA glutamyl-Q(34) synthetase GluQRS 0.23 LRK54_RS13730 HlyD family efflux transporter periplasmic adaptor subunit low > 59
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS17850 glutamyl-Q tRNA(Asp) ligase 0.11 HSERO_RS09730 glycoside hydrolase family 43 low > 78
Paraburkholderia graminis OAS925 0.32 ABIE53_001439 glutamyl-Q tRNA(Asp) synthetase 0.12 ABIE53_005376 HlyD family secretion protein low > 113
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS15535 tRNA glutamyl-Q(34) synthetase GluQRS 0.10 ABZR87_RS05675 HlyD family efflux transporter periplasmic adaptor subunit low > 80
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS03645 tRNA glutamyl-Q(34) synthetase GluQRS 0.10 RALBFv3_RS10190 secretion protein HlyD low > 76
Ralstonia solanacearum UW163 0.29 UW163_RS10025 tRNA glutamyl-Q(34) synthetase GluQRS 0.10 UW163_RS03390 secretion protein HlyD — —
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS14805 glutamyl-Q tRNA(Asp) ligase 0.09 RR42_RS02295 secretion protein HlyD low > 128
Ralstonia solanacearum PSI07 0.28 RPSI07_RS13585 tRNA glutamyl-Q(34) synthetase GluQRS 0.09 RPSI07_RS23155 hypothetical protein low > 81
Ralstonia solanacearum GMI1000 0.28 RS_RS11090 tRNA glutamyl-Q(34) synthetase GluQRS 0.08 RS_RS00805 secretion protein HlyD low > 80
Variovorax sp. OAS795 0.26 ABID97_RS18025 tRNA glutamyl-Q(34) synthetase GluQRS 0.13 ABID97_RS10425 HlyD family efflux transporter periplasmic adaptor subunit low > 91

Not shown: 36 genomes with orthologs for CSW01_03150 only; 8 genomes with orthologs for CSW01_08330 only