| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_13000 | | peptidylprolyl isomerase | 1.0 | CSW01_07150 | | spermidine/putrescine ABC transporter permease PotC | 0.61 | 3 |
| Serratia liquefaciens MT49 | 0.66 | IAI46_01730 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.36 | IAI46_08385 | | putrescine ABC transporter permease PotI | low | > 87 |
| Erwinia amylovora T8 | 0.65 | OLJFJH_02420 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.36 | OLJFJH_16295 | | putrescine ABC transporter permease PotI | low | > 58 |
| Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS03920 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.73 | HER17_RS11670 | | spermidine/putrescine ABC transporter permease PotC | low | > 75 |
| Enterobacter asburiae PDN3 | 0.63 | EX28DRAFT_3390 | | FKBP-type peptidyl-prolyl cis-trans isomerases 1 | 0.79 | EX28DRAFT_1806 | | ABC-type spermidine/putrescine transport system, permease component II | low | > 76 |
| Klebsiella pneumoniae MKP103 | 0.63 | KDGMDA_11180 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.75 | KDGMDA_18850 | | spermidine/putrescine ABC transporter permease PotC | low | > 95 |
| Klebsiella michiganensis M5al | 0.63 | BWI76_RS02695 | | peptidyl-prolyl cis-trans isomerase | 0.74 | BWI76_RS11245 | | spermidine/putrescine ABC transporter permease PotC | low | > 92 |
| Dickeya dianthicola 67-19 | 0.62 | HGI48_RS17255 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.34 | HGI48_RS09495 | | putrescine ABC transporter permease PotI | low | > 71 |
| Pantoea sp. MT58 | 0.62 | IAI47_02685 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.37 | IAI47_13030 | | putrescine ABC transporter permease PotI | low | > 76 |
| Dickeya dadantii 3937 | 0.62 | DDA3937_RS17200 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.34 | DDA3937_RS09475 | | putrescine ABC transporter permease PotI | low | > 74 |
| Dickeya dianthicola ME23 | 0.62 | DZA65_RS18345 | | peptidyl-prolyl cis-trans isomerase | 0.34 | DZA65_RS09805 | | putrescine ABC transporter permease PotI | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.62 | GFF860 | | FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) | 0.71 | GFF3405 | | Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) | low | > 78 |
| Pantoea agglomerans CFBP13505 P0401 | 0.62 | PagCFBP13505_RS11280 | | peptidyl-prolyl cis-trans isomerase | 0.36 | PagCFBP13505_RS04300 | | putrescine ABC transporter permease PotI | low | > 74 |
| Enterobacter sp. TBS_079 | 0.62 | MPMX20_00483 | | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase | 0.75 | MPMX20_01805 | | Inner membrane ABC transporter permease protein YdcV | 0.14 | 82 |
| Rahnella sp. WP5 | 0.62 | EX31_RS08735 | | peptidylprolyl isomerase | 0.35 | EX31_RS09615 | | putrescine ABC transporter permease PotI | low | > 89 |
| Escherichia coli BW25113 | 0.62 | b4207 | fklB | FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) (VIMSS) | 0.76 | b1124 | potC | spermidine/putrescine ABC transporter membrane protein (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS24445 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.76 | ECOLIN_RS06475 | | spermidine/putrescine ABC transporter permease PotC | — | — |
| Escherichia coli ECRC102 | 0.62 | NIAGMN_09925 | fklB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.76 | NIAGMN_24400 | potC | spermidine/putrescine ABC transporter permease PotC | low | > 80 |
| Escherichia coli ECRC62 | 0.62 | BNILDI_07185 | fklB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.76 | BNILDI_19110 | potC | spermidine/putrescine ABC transporter permease PotC | low | > 75 |
| Escherichia coli ECRC98 | 0.62 | JDDGAC_15715 | fklB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.76 | JDDGAC_07090 | potC | spermidine/putrescine ABC transporter permease PotC | low | > 87 |
| Escherichia coli ECRC99 | 0.62 | KEDOAH_16080 | fklB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.76 | KEDOAH_24325 | potC | spermidine/putrescine ABC transporter permease PotC | — | — |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_10280 | fklB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.76 | HEPCGN_24065 | potC | spermidine/putrescine ABC transporter permease PotC | low | > 88 |
| Escherichia coli ECOR27 | 0.62 | NOLOHH_04335 | fklB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.76 | NOLOHH_20945 | potC | spermidine/putrescine ABC transporter permease PotC | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_03828 | | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase | 0.76 | OHPLBJKB_02544 | | Inner membrane ABC transporter permease protein YdcV | low | > 74 |
| Escherichia coli ECRC101 | 0.62 | MCAODC_02590 | fklB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.76 | MCAODC_22790 | potC | spermidine/putrescine ABC transporter permease PotC | low | > 87 |
| Escherichia coli ECRC100 | 0.62 | OKFHMN_12075 | fklB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.76 | OKFHMN_03430 | potC | spermidine/putrescine ABC transporter permease PotC | low | > 79 |
| Escherichia fergusonii Becca | 0.62 | EFB2_04321 | | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase | 0.76 | EFB2_02851 | | Inner membrane ABC transporter permease protein YdcV | low | > 86 |
| Escherichia coli BL21 | 0.62 | ECD_04079 | | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) | 0.76 | ECD_01122 | | spermidine/putrescine ABC transporter permease | low | > 61 |
| Shewanella oneidensis MR-1 | 0.59 | SO1139 | fklB | peptidyl-prolyl cis-trans isomerase FklB (NCBI ptt file) | 0.37 | SO1273 | | polyamine ABC transporter, permease protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_0965 | | peptidylprolyl isomerase, FKBP-type (RefSeq) | 0.37 | Shewana3_3094 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.59 | Shew_2841 | | peptidylprolyl isomerase, FKBP-type (RefSeq) | 0.37 | Shew_0976 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.57 | Sama_2506 | | peptidyl-prolyl cis-trans isomerase FklB (RefSeq) | 0.35 | Sama_2639 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_3390 | | FKBP-type peptidyl-prolyl cis-trans isomerases 1 | 0.36 | Psest_4280 | | ABC-type spermidine/putrescine transport system, permease component II | low | > 67 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_5096 | | FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) | 0.36 | Pf6N2E2_4517 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_15780 | | peptidylprolyl isomerase | 0.36 | AO356_13175 | | spermidine/putrescine ABC transporter permease | low | > 104 |
| Pseudomonas sp. DMC3 | 0.49 | GFF3976 | | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase | 0.36 | GFF283 | | Inner membrane ABC transporter permease protein YdcV | — | — |
| Pseudomonas sp. RS175 | 0.49 | PFR28_03776 | | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase | 0.38 | PFR28_04291 | | Inner membrane ABC transporter permease protein YdcV | low | > 88 |
| Pseudomonas sp. SVBP6 | 0.49 | COO64_RS03055 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.36 | COO64_RS00870 | | ABC transporter permease subunit | low | > 93 |
| Pseudomonas segetis P6 | 0.49 | MPMX49_03950 | | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase | 0.37 | MPMX49_00550 | | Inner membrane ABC transporter permease protein YdcV | low | > 75 |
| Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_2793 | | FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) | 0.36 | Pf1N1B4_2263 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 87 |
| Parabacteroides merdae CL09T00C40 | 0.49 | HMPREF1078_RS12800 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.31 | HMPREF1078_RS08110 | | ABC transporter permease | low | > 61 |
| Pseudomonas fluorescens GW456-L13 | 0.49 | PfGW456L13_1464 | | FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) | 0.38 | PfGW456L13_2828 | | Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_16275 | | FKBP-type peptidyl-prolyl cis-trans isomerase FklB | 0.38 | OH686_11310 | | Spermidine/putrescine import ABC transporter permease protein PotC | low | > 80 |
| Pseudomonas putida KT2440 | 0.49 | PP_0684 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.37 | PP_5177 | | spermidine/putrescine ABC transporter - permease subunit | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_14080 | | peptidylprolyl isomerase | 0.36 | AO353_08560 | | spermidine/putrescine ABC transporter permease | low | > 101 |
| Pseudomonas sp. BP01 | 0.48 | JOY50_RS24690 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.36 | JOY50_RS22330 | | ABC transporter permease subunit | low | > 84 |
| Bacteroides ovatus ATCC 8483 | 0.47 | BACOVA_02198 | | peptidyl-prolyl cis-trans isomerase, FKBP-type | 0.29 | BACOVA_00084 | | ABC transporter, permease protein | low | > 96 |
| Pseudomonas aeruginosa PUPa3 | 0.47 | DQ20_RS56050 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.37 | DQ20_RS42195 | | ABC transporter permease | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS25395 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.37 | PFLU_RS28755 | | ABC transporter permease subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS25395 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.37 | PFLU_RS28755 | | ABC transporter permease subunit | low | > 109 |
| Pseudomonas aeruginosa MRSN321 | 0.47 | DY961_RS23585 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.37 | DY961_RS14935 | | ABC transporter permease | low | > 100 |
| Pseudomonas aeruginosa PA14 | 0.47 | IKLFDK_00660 | | peptidylprolyl isomerase | 0.37 | IKLFDK_18425 | | spermidine/putrescine ABC transporter permease | low | > 98 |
| Pseudomonas lactucae CFBP13502 | 0.47 | GEMAOFIL_04867 | | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase | 0.37 | GEMAOFIL_05561 | | Inner membrane ABC transporter permease protein YdcV | low | > 96 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_23580 | | peptidylprolyl isomerase | 0.37 | PS417_27105 | | spermidine/putrescine ABC transporter permease | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_4255 | | FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type | 0.35 | Psyr_4861 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas orientalis W4I3 | 0.47 | QF045_RS25835 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.37 | QF045_RS01480 | | ABC transporter permease subunit | low | > 93 |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_4255 | | FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type | 0.35 | Psyr_4861 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.46 | BT2976 | | FKBP-type peptidyl-prolyl cis-trans isomerase, outer membrane protein precursor (NCBI ptt file) | 0.31 | BT1289 | | putrescine transport system permease protein potI (NCBI ptt file) | low | > 81 |
| Phocaeicola vulgatus CL09T03C04 | 0.45 | HMPREF1058_RS12540 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.28 | HMPREF1058_RS03230 | | ABC transporter permease | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.45 | ABI39_RS04170 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | ABI39_RS17810 | | ABC transporter permease | low | > 72 |
| Bacteroides stercoris CC31F | 0.45 | HMPREF1181_RS01335 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.31 | HMPREF1181_RS12430 | | ABC transporter permease | low | > 56 |
Not shown: 10 genomes with orthologs for CSW01_13000 only; 34 genomes with orthologs for CSW01_07150 only