Conservation of cofitness between CSW01_05695 and CSW01_06735 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05695 class I SAM-dependent methyltransferase 1.0 CSW01_06735 methylisocitrate lyase 0.57 4
Shewanella loihica PV-4 0.48 Shew_1484 cyclopropane-fatty-acyl-phospholipid synthase (RefSeq) 0.67 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.47 MIT1002_02688 Cyclopropane-fatty-acyl-phospholipid synthase 0.67 MIT1002_03129 Methylisocitrate lyase low > 70
Shewanella amazonensis SB2B 0.46 Sama_0816 cyclopropane-fatty-acyl-phospholipid synthase (RefSeq) 0.61 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.46 SO3379 cfa cyclopropane-fatty-acyl-phospholipid synthase (NCBI ptt file) 0.63 SO0345 prpB methylisocitrate lyase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_1171 cyclopropane-fatty-acyl-phospholipid synthase (RefSeq) 0.63 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) low > 73
Pseudomonas lactucae CFBP13502 0.44 GEMAOFIL_00934 hypothetical protein 0.62 GEMAOFIL_04361 2-methylisocitrate lyase low > 93
Pseudomonas simiae WCS417 0.44 PS417_03640 cyclopropane-fatty-acyl-phospholipid synthase 0.63 PS417_21080 2-methylisocitrate lyase — —
Pseudomonas sp. DMC3 0.43 GFF4484 Tuberculostearic acid methyltransferase UfaA1 0.63 GFF5230 2-methylisocitrate lyase low > 89
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS03690 class I SAM-dependent methyltransferase 0.62 PFLU_RS22690 methylisocitrate lyase low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS03690 class I SAM-dependent methyltransferase 0.62 PFLU_RS22690 methylisocitrate lyase low > 109
Pseudomonas sp. S08-1 0.43 OH686_07875 S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase 0.56 OH686_01690 methylisocitrate lyase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_0956 Cyclopropane-fatty-acyl-phospholipid synthase 0.62 Psyr_2085 methylisocitrate lyase low > 86
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_0956 Cyclopropane-fatty-acyl-phospholipid synthase 0.62 Psyr_2085 methylisocitrate lyase low > 86
Methylophilus sp. DMC18 0.42 GFF716 Tuberculostearic acid methyltransferase UfaA1 0.62 GFF469 2-methylisocitrate lyase — —
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0627 Cyclopropane fatty acid synthase and related methyltransferases 0.64 B158DRAFT_1343 methylisocitrate lyase low > 40
Pseudomonas stutzeri RCH2 0.42 Psest_2402 Cyclopropane fatty acid synthase and related methyltransferases 0.63 Psest_2321 methylisocitrate lyase low > 67
Pseudomonas segetis P6 0.42 MPMX49_01343 Tuberculostearic acid methyltransferase UfaA1 0.62 MPMX49_02628 2-methylisocitrate lyase low > 75
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_25315 cyclopropane-fatty-acyl-phospholipid synthase 0.64 AO356_20865 2-methylisocitrate lyase low > 104
Pseudomonas putida KT2440 0.42 PP_2734 Cyclopropane-fatty-acyl-phospholipid synthase 0.63 PP_2334 2-methylisocitrate lyase low > 96
Pseudomonas sp. RS175 0.41 PFR28_02038 hypothetical protein 0.64 PFR28_02928 2-methylisocitrate lyase low > 88
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_1350 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79), plant type 0.63 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) low > 103
Acinetobacter baumannii LAC-4 0.41 RR41_RS06590 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.60 RR41_RS18485 methylisocitrate lyase low > 55
Pseudomonas sp. BP01 0.41 JOY50_RS03410 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.63 JOY50_RS25750 prpB methylisocitrate lyase low > 84
Rhodanobacter denitrificans MT42 0.40 LRK55_RS07275 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.58 LRK55_RS00470 methylisocitrate lyase low > 63
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS07535 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.58 LRK54_RS00695 methylisocitrate lyase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.3607.1 S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase 0.58 Xcc-8004.3981.1 Methylisocitrate lyase (EC 4.1.3.30) low > 74
Marinobacter adhaerens HP15 0.40 HP15_1773 cyclopropane-fatty-acyl-phospholipid synthase 0.68 HP15_1932 methylisocitrate lyase 2 — —
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_13955 cfa SAM-dependent methyltransferase 0.59 OKGIIK_06565 prpB methylisocitrate lyase low > 53
Lysobacter sp. OAE881 0.39 ABIE51_RS02520 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.57 ABIE51_RS06015 methylisocitrate lyase low > 62
Bosea sp. OAE506 0.36 ABIE41_RS10305 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.29 ABIE41_RS16605 isocitrate lyase/PEP mutase family protein low > 77
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF2526 S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase 0.30 GFF3032 Methylisocitrate lyase (EC 4.1.3.30) — —
Variovorax sp. OAS795 0.32 ABID97_RS21850 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.32 ABID97_RS18835 oxaloacetate decarboxylase low > 91
Rhodospirillum rubrum S1H 0.31 Rru_A0725 Cyclopropane-fatty-acyl-phospholipid synthase (NCBI) 0.34 Rru_A2320 Ankyrin (NCBI) low > 58
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_01468 cyclopropane-fatty-acyl-phospholipid synthase 0.30 H281DRAFT_06209 carboxyvinyl-carboxyphosphonate phosphorylmutase low > 103
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS29215 cyclopropane-fatty-acyl-phospholipid synthase 0.62 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) low > 128
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS21055 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.62 ABZR87_RS14590 methylisocitrate lyase low > 80
Escherichia coli ECOR27 0.25 NOLOHH_17890 cfa cyclopropane fatty acyl phospholipid synthase 0.62 NOLOHH_01775 prpB methylisocitrate lyase — —
Escherichia coli ECRC62 0.25 BNILDI_16680 cfa cyclopropane fatty acyl phospholipid synthase 0.62 BNILDI_23190 prpB methylisocitrate lyase low > 75
Escherichia fergusonii Becca 0.25 EFB2_02331 Cyclopropane-fatty-acyl-phospholipid synthase 0.62 EFB2_03706 2-methylisocitrate lyase low > 86
Escherichia coli BL21 0.25 ECD_01632 cyclopropane fatty acyl phospholipid synthase, SAM-dependent 0.62 ECD_00286 2-methylisocitrate lyase low > 61
Escherichia coli ECRC99 0.25 KEDOAH_00740 cfa cyclopropane fatty acyl phospholipid synthase 0.61 KEDOAH_19065 prpB methylisocitrate lyase — —
Escherichia coli ECRC100 0.25 OKFHMN_27370 cfa cyclopropane fatty acyl phospholipid synthase 0.61 OKFHMN_08900 prpB methylisocitrate lyase low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_02063 Cyclopropane-fatty-acyl-phospholipid synthase 0.62 OHPLBJKB_03339 2-methylisocitrate lyase low > 74
Escherichia coli Nissle 1917 0.25 ECOLIN_RS09260 cyclopropane fatty acyl phospholipid synthase 0.61 ECOLIN_RS02150 methylisocitrate lyase low > 55
Escherichia coli ECRC98 0.25 JDDGAC_01960 cfa cyclopropane fatty acyl phospholipid synthase 0.61 JDDGAC_12555 prpB methylisocitrate lyase low > 87
Escherichia coli ECRC102 0.25 NIAGMN_00695 cfa cyclopropane fatty acyl phospholipid synthase 0.61 NIAGMN_06955 prpB methylisocitrate lyase low > 80
Escherichia coli ECRC101 0.25 MCAODC_18040 cfa cyclopropane fatty acyl phospholipid synthase 0.61 MCAODC_28130 prpB methylisocitrate lyase low > 88
Escherichia coli BW25113 0.25 b1661 cfa cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) 0.62 b0331 prpB 2-methylisocitrate lyase (NCBI) low > 76
Escherichia coli ECOR38 0.25 HEPCGN_05755 cfa cyclopropane fatty acyl phospholipid synthase 0.62 HEPCGN_07485 prpB methylisocitrate lyase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF3615 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.59 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) low > 78
Dickeya dianthicola ME23 0.24 DZA65_RS13145 cyclopropane fatty acyl phospholipid synthase 0.14 DZA65_RS07470 phosphoenolpyruvate mutase low > 75
Dickeya dianthicola 67-19 0.24 HGI48_RS12690 cyclopropane fatty acyl phospholipid synthase 0.14 HGI48_RS06990 phosphoenolpyruvate mutase low > 71
Castellaniella sp019104865 MT123 0.18 ABCV34_RS00875 class I SAM-dependent methyltransferase 0.58 ABCV34_RS01670 methylisocitrate lyase low > 48

Not shown: 28 genomes with orthologs for CSW01_05695 only; 19 genomes with orthologs for CSW01_06735 only