Conservation of cofitness between CSW01_07875 and CSW01_06715 in Vibrio cholerae E7946 ATCC 55056

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07875 cytochrome BD ubiquinol oxidase subunit II 1.0 CSW01_06715 tripartite tricarboxylate transporter permease 0.66 4
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS25830 cytochrome BD ubiquinol oxidase subunit II 0.37 RR42_RS34870 hypothetical protein low > 128
Dinoroseobacter shibae DFL-12 0.51 Dshi_2689 cytochrome bd ubiquinol oxidase subunit II (RefSeq) 0.52 Dshi_3121 Tricarboxylate transport membrane protein TctA (from data) low > 64
Ralstonia solanacearum GMI1000 0.50 RS_RS23140 cytochrome d ubiquinol oxidase subunit II 0.38 RS_RS03985 tripartite tricarboxylate transporter permease low > 80
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS17835 cytochrome bd ubiquinol oxidase subunit II 0.36 RALBFv3_RS13190 tripartite tricarboxylate transporter permease low > 76
Ralstonia solanacearum UW163 0.49 UW163_RS21305 cytochrome bd ubiquinol oxidase subunit II 0.36 UW163_RS00380 tripartite tricarboxylate transporter permease — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS18835 cytochrome d ubiquinol oxidase subunit II 0.37 ABZR87_RS09270 tripartite tricarboxylate transporter permease low > 80
Ralstonia solanacearum PSI07 0.49 RPSI07_RS05725 cytochrome d ubiquinol oxidase subunit II 0.38 RPSI07_RS20030 tripartite tricarboxylate transporter permease low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF216 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) 0.40 GFF3031 Tricarboxylate transport membrane protein TctA low > 90
Xanthobacter sp. DMC5 0.34 GFF3217 Cytochrome bd-I ubiquinol oxidase subunit 2 0.38 GFF2404 hypothetical protein — —
Bosea sp. OAE506 0.34 ABIE41_RS22795 cytochrome d ubiquinol oxidase subunit II 0.38 ABIE41_RS22680 tripartite tricarboxylate transporter permease low > 77
Enterobacter sp. TBS_079 0.33 MPMX20_02428 Cytochrome bd-II ubiquinol oxidase subunit 2 0.40 MPMX20_03195 hypothetical protein low > 85
Pseudomonas putida KT2440 0.33 PP_4650 Ubiquinol oxidase subunit II, cyanide insensitive 0.41 PP_1416 putative Tricarboxylate transport protein TctA low > 96
Pseudomonas sp. RS175 0.33 PFR28_03800 Cytochrome bd-II ubiquinol oxidase subunit 2 0.40 PFR28_00679 hypothetical protein low > 88
Variovorax sp. OAS795 0.33 ABID97_RS28655 cytochrome d ubiquinol oxidase subunit II 0.37 ABID97_RS25820 tripartite tricarboxylate transporter permease low > 91
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_13945 ubiquinol oxidase subunit II 0.41 AO353_17570 tripartite tricarboxylate transporter TctA low > 101
Pseudomonas sp. BP01 0.32 JOY50_RS02200 cydB cytochrome d ubiquinol oxidase subunit II 0.41 JOY50_RS14610 tripartite tricarboxylate transporter permease low > 84
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_15645 ubiquinol oxidase subunit II 0.41 AO356_04625 tripartite tricarboxylate transporter TctA low > 104
Pseudomonas orientalis W4I3 0.32 QF045_RS26640 cytochrome d ubiquinol oxidase subunit II 0.41 QF045_RS09780 tripartite tricarboxylate transporter permease low > 93
Pseudomonas sp. S08-1 0.32 OH686_16120 cytochrome d ubiquinol oxidase, subunit II 0.39 OH686_19985 Tripartite tricarboxylate transporter TctA family low > 80
Klebsiella michiganensis M5al 0.32 BWI76_RS14255 terminal oxidase subunit II 0.42 BWI76_RS20045 hypothetical protein low > 92
Pseudomonas fluorescens SBW25 0.32 PFLU_RS26265 cytochrome d ubiquinol oxidase subunit II 0.41 PFLU_RS07140 tripartite tricarboxylate transporter permease low > 109
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05022 Cytochrome bd-I ubiquinol oxidase subunit 2 0.42 GEMAOFIL_01561 hypothetical protein low > 96
Pseudomonas segetis P6 0.32 ACVTMO_RS19785 cydB cytochrome d ubiquinol oxidase subunit II 0.40 ACVTMO_RS06885 tripartite tricarboxylate transporter permease low > 75
Pseudomonas simiae WCS417 0.32 PS417_24345 ubiquinol oxidase subunit II 0.41 PS417_07065 tripartite tricarboxylate transporter TctA low > 88
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_5069 putative Cytochrome bd2, subunit II 0.41 Pf6N2E2_2770 Tricarboxylate transport membrane protein TctA low > 103
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS26265 cytochrome d ubiquinol oxidase subunit II 0.41 PFLU_RS07140 tripartite tricarboxylate transporter permease low > 109
Pseudomonas sp. SVBP6 0.32 COO64_RS02890 cydB cytochrome d ubiquinol oxidase subunit II 0.40 COO64_RS16470 tripartite tricarboxylate transporter permease low > 93
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2761 putative Cytochrome bd2, subunit II 0.41 Pf1N1B4_3311 Tricarboxylate transport membrane protein TctA low > 87
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1436 putative Cytochrome bd2, subunit II 0.41 PfGW456L13_4528 Tricarboxylate transport membrane protein TctA low > 87
Pseudomonas sp. DMC3 0.31 GFF3946 Cytochrome bd-I ubiquinol oxidase subunit 2 0.39 GFF2268 hypothetical protein low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_4281 cytochrome bd quinol oxidase subunit 2 apoprotein 0.42 Psyr_3968 Protein of unknown function DUF112 low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_4281 cytochrome bd quinol oxidase subunit 2 apoprotein 0.42 Psyr_3968 Protein of unknown function DUF112 low > 86
Pseudomonas stutzeri RCH2 0.31 Psest_2558 cytochrome d oxidase, subunit II (cydB) 0.39 Psest_0208 Uncharacterized protein conserved in bacteria low > 67
Pseudomonas aeruginosa PUPa3 0.31 DQ20_RS48535 cioB;inference=COORDINATES cyanide-insensitive cytochrome bd quinol oxidase subunit II 0.38 DQ20_RS44105 tripartite tricarboxylate transporter permease low > 101
Pseudomonas aeruginosa MRSN321 0.31 DY961_RS13215 cioB;inference=COORDINATES cyanide-insensitive cytochrome bd quinol oxidase subunit II 0.38 DY961_RS08745 tripartite tricarboxylate transporter permease low > 100
Pseudomonas aeruginosa PA14 0.31 IKLFDK_20270 cyanide-insensitive cytochrome bd quinol oxidase subunit II 0.38 IKLFDK_03210 Tricarboxylate transport membrane protein TctA low > 98
Phaeobacter inhibens DSM 17395 0.31 PGA1_c19660 cytochrome d ubiquinol oxidase subunit 2 0.53 PGA1_c07960 putative integral membrane protein low > 62
Pantoea sp. MT58 0.31 IAI47_03475 cytochrome d ubiquinol oxidase subunit II 0.41 IAI47_06200 tripartite tricarboxylate transporter permease low > 76
Azospirillum sp. SherDot2 0.31 MPMX19_05025 Cytochrome bd-I ubiquinol oxidase subunit 2 0.36 MPMX19_00428 hypothetical protein low > 112
Pantoea agglomerans CFBP13505 P0401 0.30 PagCFBP13505_RS16230 cytochrome d ubiquinol oxidase subunit II 0.42 PagCFBP13505_RS00155 tripartite tricarboxylate transporter permease low > 74
Dickeya dadantii 3937 0.30 DDA3937_RS08550 cytochrome d ubiquinol oxidase subunit II 0.40 DDA3937_RS14500 tripartite tricarboxylate transporter permease low > 74
Rhodopseudomonas palustris CGA009 0.30 TX73_024915 cytochrome d ubiquinol oxidase subunit II 0.39 TX73_018100 tripartite tricarboxylate transporter permease low > 86
Serratia liquefaciens MT49 0.30 IAI46_15415 cytochrome d ubiquinol oxidase subunit II 0.40 IAI46_17890 tripartite tricarboxylate transporter permease low > 87
Marinobacter adhaerens HP15 0.29 HP15_1747 cytochrome d ubiquinol oxidase, subunit II 0.42 HP15_2659 Citrate uptake transporter, large transmembrane component TctA (from data) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF4255 putative Cytochrome bd2, subunit II 0.42 GFF1562 Tricarboxylate transport membrane protein TctA 0.69 41
Sinorhizobium meliloti 1021 0.27 SMc02254 quinol oxidase subunit II transmembrane protein 0.39 SM_b20027 hypothetical protein — —

Not shown: 23 genomes with orthologs for CSW01_07875 only; 13 genomes with orthologs for CSW01_06715 only