Conservation of cofitness between CSW01_18045 and CSW01_06360 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18045 UDP-glucose 4-epimerase GalE 1.0 CSW01_06360 rhodanese domain-containing protein 0.45 6
Shewanella sp. ANA-3 0.64 Shewana3_2783 UDP-galactose 4-epimerase (RefSeq) 0.70 Shewana3_2261 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO1664 galE UDP-glucose 4-epimerase (NCBI ptt file) 0.68 SO2290 rhodanese domain protein (NCBI ptt file) low > 76
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS10045 UDP-glucose 4-epimerase 0.30 HSERO_RS17830 rhodanese low > 78
Pseudomonas sp. DMC3 0.61 GFF1316 UDP-glucose 4-epimerase 0.59 GFF4690 hypothetical protein low > 89
Shewanella loihica PV-4 0.61 Shew_1433 UDP-glucose 4-epimerase (RefSeq) 0.70 Shew_1781 hypothetical protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.60 MIT1002_00970 UDP-glucose 4-epimerase 0.69 MIT1002_01995 putative rhodanese-related sulfurtransferase 0.84 25
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS19470 UDP-glucose 4-epimerase GalE 0.31 ABZR87_RS15510 sulfurtransferase low > 80
Ralstonia solanacearum GMI1000 0.59 RS_RS22435 UDP-glucose 4-epimerase GalE 0.29 RS_RS11070 sulfurtransferase low > 80
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS18435 UDP-glucose 4-epimerase GalE 0.30 RALBFv3_RS03625 sulfurtransferase low > 76
Ralstonia solanacearum PSI07 0.59 RPSI07_RS05120 UDP-glucose 4-epimerase GalE 0.30 RPSI07_RS13605 sulfurtransferase 0.73 13
Ralstonia solanacearum UW163 0.59 UW163_RS20695 UDP-glucose 4-epimerase GalE 0.30 UW163_RS10045 sulfurtransferase — —
Pseudomonas stutzeri RCH2 0.58 Psest_0069 UDP-glucose-4-epimerase 0.56 Psest_2679 Predicted sulfurtransferase low > 67
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS35875 UDP-galactose-4-epimerase 0.29 RR42_RS04645 rhodanese superfamily protein low > 128
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS25435 UDP-glucose 4-epimerase GalE 0.25 QEN71_RS24475 sulfurtransferase low > 153
Paraburkholderia graminis OAS925 0.57 ABIE53_001185 UDP-glucose 4-epimerase 0.27 ABIE53_001440 UPF0176 protein low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF3323 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.53 GFF4655 Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup low > 90
Acinetobacter radioresistens SK82 0.55 MPMX26_00066 UDP-glucose 4-epimerase 0.47 MPMX26_00718 Thiosulfate sulfurtransferase GlpE low > 36
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_5092 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.59 Pf1N1B4_364 Rhodanese domain protein UPF0176 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_2704 UDP-galactose 4-epimerase 0.58 Psyr_3658 Rhodanese-like protein low > 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_2704 UDP-galactose 4-epimerase 0.58 Psyr_3658 Rhodanese-like protein low > 86
Pseudomonas orientalis W4I3 0.54 QF045_RS12985 UDP-glucose 4-epimerase GalE 0.58 QF045_RS21115 rhodanese-related sulfurtransferase low > 93
Acinetobacter baumannii LAC-4 0.53 RR41_RS18525 UDP-glucose 4-epimerase GalE 0.46 RR41_RS04010 rhodanese-related sulfurtransferase low > 55
Dinoroseobacter shibae DFL-12 0.47 Dshi_3868 UDP-glucose 4-epimerase (RefSeq) 0.48 Dshi_3348 Rhodanese domain protein (RefSeq) low > 64
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_00090 UDP-glucose 4-epimerase 0.45 CCNA_01113 rhodanese-related sulfurtransferase low > 67
Caulobacter crescentus NA1000 0.38 CCNA_00090 UDP-glucose 4-epimerase 0.45 CCNA_01113 rhodanese-related sulfurtransferase low > 66
Methylophilus sp. DMC18 0.38 GFF702 UDP-glucose 4-epimerase 0.61 GFF1197 hypothetical protein — —
Agrobacterium fabrum C58 0.38 Atu4166 UDP-glucose 4-epimerase 0.54 Atu4491 hypothetical protein low > 89
Synechocystis sp000284455 PCC 6803 0.37 SGL_RS08980 UDP-glucose 4-epimerase GalE 0.39 SGL_RS13080 rhodanese-related sulfurtransferase — —
Rhizobium sp. OAE497 0.36 ABIE40_RS18880 UDP-glucose 4-epimerase GalE 0.58 ABIE40_RS16740 rhodanese-related sulfurtransferase low > 107
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_21135 UDP-galactose-4-epimerase 0.60 AO353_02135 hypothetical protein low > 101
Phaeobacter inhibens DSM 17395 0.35 PGA1_c34470 UDP-glucose 4-epimerase ExoB 0.52 PGA1_c32160 Predicted sulfurtransferase low > 62
Sinorhizobium meliloti 1021 0.34 SM_b20942 UDP glucose 4-epimerase 0.55 SMc03156 hypothetical protein low > 103
Pseudomonas sp. BP01 0.34 JOY50_RS21520 galE UDP-glucose 4-epimerase GalE 0.60 JOY50_RS16195 rhodanese-related sulfurtransferase — —
Marinobacter adhaerens HP15 0.33 HP15_2048 UDP-glucose 4-epimerase 0.66 HP15_2899 rhodanese sulfurtransferase low > 73
Pseudomonas protegens RBAN4 0.33 FABNJH_10090 galE UDP-glucose 4-epimerase GalE 0.58 FABNJH_22365 trhO rhodanese-related sulfurtransferase — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_1305 UDP-glucose-4-epimerase GalE 0.48 Ga0059261_3413 Predicted sulfurtransferase — —
Pseudomonas putida KT2440 0.31 PP_3129 UDP-glucose 4-epimerase 0.60 PP_1758 putative sulfurtransferase containing rhodanese-like domain low > 96

Not shown: 61 genomes with orthologs for CSW01_18045 only; 17 genomes with orthologs for CSW01_06360 only