Conservation of cofitness between CSW01_03435 and CSW01_06085 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03435 protease 1.0 CSW01_06085 urocanate hydratase 0.79 1
Klebsiella michiganensis M5al 0.75 BWI76_RS24970 peptidase U32 0.74 BWI76_RS08735 Urocanate hydratase (EC 4.2.1.49) (from data) low > 92
Escherichia coli ECOR38 0.74 HEPCGN_17050 protease 0.70 HEPCGN_01335 hutU urocanate hydratase 0.44 27
Rahnella sp. WP5 0.74 EX31_RS08480 U32 family peptidase 0.71 EX31_RS06760 urocanate hydratase low > 89
Dickeya dianthicola ME23 0.73 DZA65_RS03285 U32 family peptidase 0.70 DZA65_RS15830 urocanate hydratase low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS03115 U32 family peptidase 0.72 DDA3937_RS14990 urocanate hydratase low > 74
Dickeya dianthicola 67-19 0.73 HGI48_RS03290 U32 family peptidase 0.71 HGI48_RS15085 urocanate hydratase low > 71
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3207 Collagenase and related proteases 0.74 EX28DRAFT_2220 urocanate hydratase (EC 4.2.1.49) low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04062 putative protease YhbU 0.75 MPMX20_01399 Urocanate hydratase low > 85
Pantoea sp. MT58 0.72 IAI47_16965 U32 family peptidase 0.71 IAI47_13280 urocanate hydratase low > 76
Serratia liquefaciens MT49 0.71 IAI46_02015 U32 family peptidase 0.76 IAI46_03665 urocanate hydratase low > 86
Pseudomonas aeruginosa PA14 0.65 IKLFDK_20175 protease 0.76 IKLFDK_28020 urocanate hydratase low > 101
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_22050 protease 0.76 AO353_12250 Urocanate hydratase (EC 4.2.1.49) (from data) low > 101
Pseudomonas sp. SVBP6 0.64 COO64_RS14190 peptidase U32 family protein 0.76 COO64_RS13410 hutU urocanate hydratase low > 93
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_5746 FIG139552: Putative protease 0.76 Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) (from data) low > 87
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_25160 protease 0.75 AO356_09630 Urocanate hydratase (EC 4.2.1.49) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_721 FIG139552: Putative protease 0.75 Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) (from data) low > 103
Pseudomonas sp. RS175 0.63 PFR28_02214 putative protease YhbU 0.75 PFR28_04965 Urocanate hydratase low > 88
Castellaniella sp019104865 MT123 0.63 ABCV34_RS06420 peptidase U32 family protein 0.68 ABCV34_RS12785 urocanate hydratase low > 48
Shewanella loihica PV-4 0.62 Shew_2787 peptidase U32 (RefSeq) 0.80 Shew_3757 urocanate hydratase (RefSeq) low > 60
Pseudomonas simiae WCS417 0.62 PS417_15755 protease 0.75 PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) low > 88
Shewanella oneidensis MR-1 0.62 SO1249 peptidase, U32 family (NCBI ptt file) 0.79 SO0097 hutU urocanate hydratase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.62 Shewana3_1065 peptidase U32 (RefSeq) 0.79 Shewana3_0100 urocanate hydratase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.60 Sama_0998 U32 family peptidase (RefSeq) 0.26 Sama_1632 Urocanate hydratase (EC 4.2.1.49) (from data) low > 62
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_2375 Collagenase and related proteases 0.79 B158DRAFT_1433 urocanate hydratase (EC 4.2.1.49) low > 40
Acidovorax sp. GW101-3H11 0.57 Ac3H11_4294 FIG139552: Putative protease 0.69 Ac3H11_2557 Urocanate hydratase (EC 4.2.1.49) (from data) low > 79
Ralstonia solanacearum UW163 0.53 UW163_RS18050 protease 0.68 UW163_RS08230 urocanate hydratase — —
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS16695 protease 0.68 RALBFv3_RS05395 urocanate hydratase low > 76
Ralstonia solanacearum PSI07 0.53 RPSI07_RS06750 U32 family peptidase 0.69 RPSI07_RS11910 urocanate hydratase low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS21795 U32 family peptidase 0.68 RS_RS13255 urocanate hydratase low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS08775 protease 0.76 RR42_RS14645 urocanate hydratase low > 128
Azospirillum brasilense Sp245 0.45 AZOBR_RS28235 protease 0.73 AZOBR_RS21740 urocanate hydratase low > 97
Azospirillum sp. SherDot2 0.45 MPMX19_03049 putative protease YhbU 0.72 MPMX19_04936 Urocanate hydratase low > 112
Rhodospirillum rubrum S1H 0.43 Rru_A2525 Peptidase U32 (NCBI) 0.75 Rru_A1304 Urocanate hydratase (NCBI) low > 58
Sinorhizobium meliloti 1021 0.42 SMa1291 Protease 0.72 SM_b21163 Urocanate hydratase (EC 4.2.1.49) (from data) low > 103
Agrobacterium fabrum C58 0.41 Atu4397 protease 0.72 Atu3931 urocanate hydratase low > 89

Not shown: 19 genomes with orthologs for CSW01_03435 only; 41 genomes with orthologs for CSW01_06085 only