Conservation of cofitness between CSW01_12530 and CSW01_05660 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12530 YecA family protein 1.0 CSW01_05660 dethiobiotin synthase 0.68 17
Erwinia tracheiphila SCR3 0.33 LU632_RS05875 YecA family protein 0.43 LU632_RS12300 bioD dethiobiotin synthase low > 74
Rahnella sp. WP5 0.33 EX31_RS21490 YecA family protein 0.42 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3010 UPF0149 exported protein YgfB 0.47 GFF1784 Dethiobiotin synthetase (EC 6.3.3.3) low > 78
Serratia liquefaciens MT49 0.32 IAI46_20880 YecA family protein 0.45 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD low > 86
Dickeya dadantii 3937 0.32 DDA3937_RS02400 YecA family protein 0.45 DDA3937_RS10680 ATP-dependent dethiobiotin synthetase BioD low > 74
Enterobacter asburiae PDN3 0.31 EX28DRAFT_2961 yecA family protein 0.45 EX28DRAFT_1492 dethiobiotin synthase low > 76
Dickeya dianthicola 67-19 0.31 HGI48_RS02355 YecA family protein 0.46 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD low > 71
Dickeya dianthicola ME23 0.31 DZA65_RS02460 YecA family protein 0.46 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD low > 75
Pectobacterium carotovorum WPP14 0.31 HER17_RS19110 YecA family protein 0.47 HER17_RS10730 dethiobiotin synthase low > 75
Enterobacter sp. TBS_079 0.31 MPMX20_03768 hypothetical protein 0.46 MPMX20_02064 ATP-dependent dethiobiotin synthetase BioD 1 low > 85
Klebsiella michiganensis M5al 0.30 BWI76_RS23900 hypothetical protein 0.46 BWI76_RS15950 dethiobiotin synthase low > 92
Erwinia tracheiphila HP pepo 2.2 0.30 IJEDHG_03295 YecA family protein 0.43 IJEDHG_23285 bioD dethiobiotin synthase low > 61
Klebsiella pneumoniae MKP103 0.30 KDGMDA_04400 UPF0149 protein KPN78578_32810 0.47 KDGMDA_21235 dethiobiotin synthase low > 95
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_00806 hypothetical protein 0.47 OHPLBJKB_02133 ATP-dependent dethiobiotin synthetase BioD 1 low > 74
Escherichia coli ECRC100 0.29 OKFHMN_19500 ygfB UPF0149 family protein YgfB 0.47 OKFHMN_27745 bioD dethiobiotin synthase — —
Escherichia coli BW25113 0.29 b2909 ygfB orf, hypothetical protein (VIMSS) 0.47 b1593 b1593 orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC99 0.29 KEDOAH_08640 ygfB UPF0149 family protein YgfB 0.47 KEDOAH_00360 bioD dethiobiotin synthase — —
Escherichia coli ECRC98 0.29 JDDGAC_23140 ygfB UPF0149 family protein YgfB 0.47 JDDGAC_02335 bioD dethiobiotin synthase low > 87
Escherichia fergusonii Becca 0.29 EFB2_00993 hypothetical protein 0.47 EFB2_02399 ATP-dependent dethiobiotin synthetase BioD 1 low > 86
Escherichia coli ECOR27 0.29 NOLOHH_11410 ygfB UPF0149 family protein YgfB 0.47 NOLOHH_18250 bioD dethiobiotin synthase — —
Escherichia coli BL21 0.29 ECD_02741 UPF0149 family protein 0.47 ECD_01562 putative dethiobiotin synthetase low > 61
Escherichia coli ECOR38 0.29 HEPCGN_18790 ygfB UPF0149 family protein YgfB 0.47 HEPCGN_06120 bioD dethiobiotin synthase low > 88
Escherichia coli Nissle 1917 0.29 ECOLIN_RS16195 UPF0149 family protein YgfB 0.47 ECOLIN_RS08900 dethiobiotin synthase — —
Escherichia coli ECRC101 0.29 MCAODC_10020 ygfB UPF0149 family protein YgfB 0.47 MCAODC_17665 bioD dethiobiotin synthase — —
Escherichia coli ECRC102 0.29 NIAGMN_17265 ygfB UPF0149 family protein YgfB 0.47 NIAGMN_00330 bioD dethiobiotin synthase low > 80
Escherichia coli ECRC62 0.29 BNILDI_09945 ygfB UPF0149 family protein YgfB 0.47 BNILDI_17040 bioD dethiobiotin synthase low > 75
Pantoea agglomerans CFBP13505 P0401 0.28 PagCFBP13505_RS15955 YecA family protein 0.46 PagCFBP13505_RS06400 ATP-dependent dethiobiotin synthetase BioD low > 74
Pantoea sp. MT58 0.27 IAI47_03745 YecA family protein 0.45 IAI47_09755 ATP-dependent dethiobiotin synthetase BioD low > 76
Erwinia amylovora T8 0.27 OLJFJH_08755 YecA family protein 0.43 OLJFJH_14270 dethiobiotin synthase low > 58
Shewanella loihica PV-4 0.23 Shew_3067 yecA family protein (RefSeq) 0.36 Shew_1722 dethiobiotin synthase (RefSeq) — —
Alteromonas macleodii MIT1002 0.22 MIT1002_02985 yecA family protein 0.32 MIT1002_01382 ATP-dependent dethiobiotin synthetase BioD 1 low > 70
Shewanella sp. ANA-3 0.19 Shewana3_3504 yecA family protein (RefSeq) 0.38 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.1146.1 FIG001590: Putative conserved exported protein precursor 0.24 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) — —
Lysobacter sp. OAE881 0.19 ABIE51_RS17325 UPF0149 family protein 0.33 ABIE51_RS17990 dethiobiotin synthase low > 62
Shewanella amazonensis SB2B 0.18 Sama_2724 YgfB and YecA (RefSeq) 0.35 Sama_1441 bioD dithiobiotin synthetase (RefSeq) — —
Pseudomonas sp. SVBP6 0.17 COO64_RS00995 YecA family protein 0.40 COO64_RS22705 bioD dethiobiotin synthase low > 93
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_2228 FIG001590: Putative conserved exported protein precursor 0.37 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) low > 87
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_895 FIG001590: Putative conserved exported protein precursor 0.38 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) low > 87
Shewanella oneidensis MR-1 0.16 SO0776 conserved hypothetical protein (NCBI ptt file) 0.38 SO2737 bioD dethiobiotin synthase (NCBI ptt file) — —
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_0320 Protein of unknown function UPF0149 0.35 Psyr_4683 dethiobiotin synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_0320 Protein of unknown function UPF0149 0.35 Psyr_4683 dethiobiotin synthase low > 86
Pseudomonas sp. RS175 0.16 PFR28_04322 hypothetical protein 0.37 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 — —
Pseudomonas segetis P6 0.16 MPMX49_04488 hypothetical protein 0.40 MPMX49_00763 ATP-dependent dethiobiotin synthetase BioD 1 low > 75
Pseudomonas aeruginosa PA14 0.16 IKLFDK_27345 UPF0149 protein PSPA7_5968 0.30 IKLFDK_22915 dethiobiotin synthase 0.49 86
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_0532 Uncharacterized protein conserved in bacteria 0.30 B158DRAFT_0869 dethiobiotin synthase — —
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_13005 hypothetical protein 0.37 AO356_14155 dethiobiotin synthetase low > 104
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_4479 FIG001590: Putative conserved exported protein precursor 0.36 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) low > 103
Marinobacter adhaerens HP15 0.15 HP15_3204 yecA family protein 0.37 HP15_2482 dethiobiotin synthetase low > 73
Pseudomonas sp. S08-1 0.15 OH686_11210 Putative conserved exported protein precursor 0.34 OH686_10335 dethiobiotin synthase low > 80
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_08765 hypothetical protein 0.36 AO353_07505 dethiobiotin synthetase low > 101
Pseudomonas stutzeri RCH2 0.14 Psest_0174 Uncharacterized protein conserved in bacteria 0.34 Psest_0415 dethiobiotin synthase low > 67
Pseudomonas fluorescens SBW25 0.14 PFLU_RS28950 YecA family protein 0.38 PFLU_RS27630 dethiobiotin synthase low > 109
Pseudomonas lactucae CFBP13502 0.14 GEMAOFIL_05596 hypothetical protein 0.36 GEMAOFIL_05318 ATP-dependent dethiobiotin synthetase BioD 1 low > 93
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS28950 YecA family protein 0.38 PFLU_RS27630 dethiobiotin synthase low > 109
Pseudomonas simiae WCS417 0.14 PS417_27290 hypothetical protein 0.38 PS417_25985 dethiobiotin synthetase low > 88
Pseudomonas sp. DMC3 0.13 GFF317 hypothetical protein 0.39 GFF72 ATP-dependent dethiobiotin synthetase BioD 1 low > 89

Not shown: 0 genomes with orthologs for CSW01_12530 only; 36 genomes with orthologs for CSW01_05660 only