Conservation of cofitness between CSW01_03750 and CSW01_04900 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03750 U32 family peptidase 1.0 CSW01_04900 magnesium and cobalt efflux protein CorC 0.57 17
Rahnella sp. WP5 0.77 EX31_RS20325 tRNA 5-hydroxyuridine modification protein YegQ 0.66 EX31_RS23185 CNNM family magnesium/cobalt transport protein CorC low > 89
Serratia liquefaciens MT49 0.76 IAI46_19015 tRNA 5-hydroxyuridine modification protein YegQ 0.62 IAI46_06005 CNNM family magnesium/cobalt transport protein CorC low > 87
Klebsiella pneumoniae MRSN742743 0.76 GJGHJB_01635 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.63 GJGHJB_03565 corC CNNM family magnesium/cobalt transport protein CorC low > 83
Klebsiella pneumoniae MKP103 0.76 KDGMDA_26330 tRNA 5-hydroxyuridine modification protein YegQ 0.63 KDGMDA_16480 CNNM family magnesium/cobalt transport protein CorC low > 94
Klebsiella michiganensis M5al 0.76 BWI76_RS19280 U32 family peptidase 0.63 BWI76_RS08120 cobalt transporter low > 92
Escherichia coli BL21 0.75 ECD_01986 putative peptidase 0.63 ECD_00626 putative ion transport low > 61
Escherichia coli BW25113 0.75 b2081 yegQ predicted peptidase (NCBI) 0.63 b0658 ybeX predicteed ion transport (NCBI) low > 76
Escherichia fergusonii Becca 0.75 EFB2_01770 23S rRNA 5-hydroxycytidine synthase 0.63 EFB2_03441 Magnesium and cobalt efflux protein CorC low > 86
Escherichia coli ECRC102 0.75 NIAGMN_22110 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.63 NIAGMN_05295 corC CNNM family magnesium/cobalt transport protein CorC low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_01623 putative protease YdcP 0.63 OHPLBJKB_03054 Magnesium and cobalt efflux protein CorC — —
Escherichia coli ECRC100 0.75 OKFHMN_24165 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.63 OKFHMN_07240 corC CNNM family magnesium/cobalt transport protein CorC low > 79
Escherichia coli ECRC98 0.75 JDDGAC_28275 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.63 JDDGAC_10885 corC CNNM family magnesium/cobalt transport protein CorC low > 87
Escherichia coli ECOR27 0.75 NOLOHH_15500 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.63 NOLOHH_23620 corC CNNM family magnesium/cobalt transport protein CorC low > 75
Escherichia coli ECRC99 0.75 KEDOAH_03985 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.63 KEDOAH_20730 corC CNNM family magnesium/cobalt transport protein CorC — —
Escherichia coli ECOR38 0.75 HEPCGN_02845 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.63 HEPCGN_00990 corC CNNM family magnesium/cobalt transport protein CorC — —
Escherichia coli Nissle 1917 0.75 ECOLIN_RS12250 tRNA 5-hydroxyuridine modification protein YegQ 0.63 ECOLIN_RS03540 CNNM family magnesium/cobalt transport protein CorC — —
Escherichia coli ECRC62 0.75 BNILDI_14415 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.63 BNILDI_21625 corC CNNM family magnesium/cobalt transport protein CorC low > 75
Escherichia coli ECRC101 0.75 MCAODC_20775 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.63 MCAODC_26455 corC CNNM family magnesium/cobalt transport protein CorC low > 87
Pectobacterium carotovorum WPP14 0.75 HER17_RS06280 tRNA 5-hydroxyuridine modification protein YegQ 0.62 HER17_RS15180 CNNM family magnesium/cobalt transport protein CorC low > 75
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0478 Collagenase and related proteases 0.63 EX28DRAFT_2313 Putative Mg2+ and Co2+ transporter CorC low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_03067 23S rRNA 5-hydroxycytidine synthase 0.62 MPMX20_01308 Magnesium and cobalt efflux protein CorC 0.20 51
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF3846 Putative protease 0.62 GFF4575 Magnesium and cobalt efflux protein CorC low > 78
Pseudomonas stutzeri RCH2 0.73 Psest_4096 Collagenase and related proteases 0.47 Psest_0529 Putative Mg2+ and Co2+ transporter CorC 0.24 33
Shewanella oneidensis MR-1 0.73 SO1252 peptidase, U32 family (NCBI ptt file) 0.57 SO1178 corC magnesium and cobalt efflux protein CorC (NCBI ptt file) — —
Dickeya dadantii 3937 0.73 DDA3937_RS15295 tRNA 5-hydroxyuridine modification protein YegQ 0.60 DDA3937_RS06235 CNNM family magnesium/cobalt transport protein CorC low > 74
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13516_RS07220 trhP prephenate-dependent tRNA uridine(34) hydroxylase TrhP 0.65 PagCFBP13516_RS14070 corC CNNM family magnesium/cobalt transport protein CorC low > 80
Pantoea sp. MT58 0.73 IAI47_06845 tRNA 5-hydroxyuridine modification protein YegQ 0.65 IAI47_13960 CNNM family magnesium/cobalt transport protein CorC — —
Shewanella sp. ANA-3 0.72 Shewana3_1068 peptidase U32 (RefSeq) 0.57 Shewana3_1005 CBS domain-containing protein (RefSeq) low > 73
Dickeya dianthicola 67-19 0.71 HGI48_RS15375 tRNA 5-hydroxyuridine modification protein YegQ 0.59 HGI48_RS06280 CNNM family magnesium/cobalt transport protein CorC low > 71
Dickeya dianthicola ME23 0.71 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ 0.59 DZA65_RS06625 CNNM family magnesium/cobalt transport protein CorC low > 75
Shewanella amazonensis SB2B 0.71 Sama_1004 U32 family peptidase (RefSeq) 0.59 Sama_2578 magnesium and cobalt efflux protein CorC (RefSeq) low > 62
Shewanella loihica PV-4 0.71 Shew_2783 peptidase U32 (RefSeq) 0.59 Shew_2926 CBS domain-containing protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.70 MIT1002_02342 putative protease YhbU precursor 0.58 MIT1002_01477 Magnesium and cobalt efflux protein CorC — —
Erwinia tracheiphila HP pepo 2.2 0.70 IJEDHG_18770 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.64 IJEDHG_02375 corC CNNM family magnesium/cobalt transport protein CorC low > 61
Erwinia tracheiphila SCR3 0.70 LU632_RS08665 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.64 LU632_RS16320 corC CNNM family magnesium/cobalt transport protein CorC low > 73
Pseudomonas simiae WCS417 0.69 PS417_10300 protease 0.49 PS417_24640 magnesium transporter — —
Pseudomonas sp. FW215-L2 0.69 GFF4662 putative protease YdcP 0.50 GFF2119 Magnesium and cobalt efflux protein CorC low > 111
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_3925 Putative protease 0.50 Pf1N1B4_2709 Magnesium and cobalt efflux protein CorC low > 87
Pseudomonas fluorescens SBW25 0.69 PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ 0.49 PFLU_RS26570 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ 0.49 PFLU_RS26570 HlyC/CorC family transporter low > 109
Pseudomonas segetis P6 0.69 ACVTMO_RS03685 trhP prephenate-dependent tRNA uridine(34) hydroxylase TrhP 0.50 ACVTMO_RS05295 HlyC/CorC family transporter low > 75
Pseudomonas orientalis W4I3 0.69 QF045_RS12375 tRNA 5-hydroxyuridine modification protein YegQ 0.49 QF045_RS26925 HlyC/CorC family transporter low > 93
Pseudomonas aeruginosa PUPa3 0.69 NPBIFN_05774 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.50 NPBIFN_00977 corC Magnesium and cobalt efflux protein CorC low > 101
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_19800 protease 0.50 AO353_06390 magnesium transporter 0.24 25
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_2485 Putative protease 0.50 PfGW456L13_1377 Magnesium and cobalt efflux protein CorC low > 87
Pseudomonas aeruginosa MRSN321 0.68 PFGADD_05698 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.50 PFGADD_00972 corC Magnesium and cobalt efflux protein CorC low > 99
Pseudomonas aeruginosa PA14 0.68 IKLFDK_26220 tRNA 5-hydroxyuridine modification protein YegQ 0.50 IKLFDK_20555 magnesium/cobalt efflux protein low > 98
Pseudomonas sp. DMC3 0.68 GFF1422 23S rRNA 5-hydroxycytidine synthase 0.50 GFF3897 Magnesium and cobalt efflux protein CorC low > 89
Pseudomonas sp. RS175 0.68 PFR28_02843 hypothetical protein 0.49 PFR28_03851 Magnesium and cobalt efflux protein CorC low > 88
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_45 Putative protease 0.50 Pf6N2E2_5015 Magnesium and cobalt efflux protein CorC low > 103
Pseudomonas sp. S08-1 0.68 OH686_13055 Uncharacterized protease YegQ 0.51 OH686_09230 Magnesium and cobalt efflux protein CorC low > 80
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_21300 protease 0.50 AO356_15395 magnesium transporter low > 104
Pseudomonas lactucae CFBP13502 0.67 GEMAOFIL_02169 23S rRNA 5-hydroxycytidine synthase 0.50 GEMAOFIL_05081 Magnesium and cobalt efflux protein CorC low > 96
Pseudomonas sp. SVBP6 0.67 COO64_RS24350 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.50 COO64_RS15525 HlyC/CorC family transporter low > 91
Pseudomonas protegens RBAN4 0.66 FABNJH_20725 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.47 FABNJH_27445 corC Mg2+ and Co2+ transporter CorC, contains CBS pair and CorC-HlyC domains — —
Pseudomonas putida KT2440 0.65 PP_2206 putative peptidase 0.49 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein low > 96
Pseudomonas sp. BP01 0.65 JOY50_RS12690 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.49 JOY50_RS21710 HlyC/CorC family transporter low > 84
Acinetobacter radioresistens SK82 0.63 MPMX26_02040 23S rRNA 5-hydroxycytidine synthase 0.32 MPMX26_00287 Magnesium and cobalt efflux protein CorC — —
Acinetobacter baumannii LAC-4 0.63 RR41_RS06110 tRNA 5-hydroxyuridine modification protein YegQ 0.32 RR41_RS17120 CBS domain-containing protein low > 55
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_1722 Collagenase and related proteases 0.46 B158DRAFT_0096 Putative Mg2+ and Co2+ transporter CorC low > 40
Methylophilus sp. DMC18 0.56 GFF2319 hypothetical protein 0.42 GFF821 Magnesium and cobalt efflux protein CorC low > 43
Marinobacter adhaerens HP15 0.55 HP15_2983 peptidase, U32 family 0.46 HP15_2470 metal ion transporter low > 73
Acidovorax sp. GW101-3H11 0.54 Ac3H11_3295 Probable protease (EC 3.4.24.3) 0.33 Ac3H11_1857 Magnesium and cobalt efflux protein CorC low > 79
Dechlorosoma suillum PS 0.53 Dsui_0433 collagenase-like protease 0.41 Dsui_1197 putative Mg2+ and Co2+ transporter CorC low > 51

Not shown: 1 genomes with orthologs for CSW01_03750 only; 28 genomes with orthologs for CSW01_04900 only