Conservation of cofitness between CSW01_16925 and CSW01_03930 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_16925 cytochrome b 1.0 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.42 9
Alteromonas macleodii MIT1002 0.56 MIT1002_03883 hypothetical protein 0.69 MIT1002_02791 Dual-specificity RNA methyltransferase RlmN low > 70
Shewanella sp. ANA-3 0.55 Shewana3_1178 cytochrome B561 (RefSeq) 0.71 Shewana3_1226 hypothetical protein (RefSeq) low > 73
Pseudomonas sp. S08-1 0.50 OH686_10845 Cytochrome b561-related 2 0.53 OH686_17515 23S rRNA (adenine(2503)-C(2))-methyltransferase low > 80
Shewanella oneidensis MR-1 0.49 SO3371 hypothetical Cytochrome B561 (NCBI ptt file) 0.71 SO3315 conserved hypothetical protein TIGR00048 (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_13580 cytochrome B 0.55 AO356_06605 23S rRNA (adenine(2503)-C2)-methyltransferase low > 104
Marinobacter adhaerens HP15 0.49 HP15_2524 inner membrane protein 0.52 HP15_1490 conserved hypothetical protein low > 73
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4633 Cytochrome B561 0.55 Pf6N2E2_3181 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) — —
Pseudomonas stutzeri RCH2 0.48 Psest_0307 Cytochrome B561 0.54 Psest_1259 23S rRNA m2A2503 methyltransferase low > 67
Pseudomonas sp. RS175 0.48 PFR28_04206 Cytochrome b561 0.54 PFR28_00294 Dual-specificity RNA methyltransferase RlmN low > 88
Shewanella loihica PV-4 0.47 Shew_1120 cytochrome B561 (RefSeq) 0.71 Shew_1287 hypothetical protein (RefSeq) low > 60
Pseudomonas aeruginosa PA14 0.46 IKLFDK_23310 cytochrome b 0.54 IKLFDK_19600 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 101
Rahnella sp. WP5 0.46 EX31_RS24345 cytochrome b 0.72 EX31_RS20525 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 89
Pseudomonas sp. BP01 0.46 JOY50_RS09785 cytochrome b 0.53 JOY50_RS22780 rlmN 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 84
Dickeya dadantii 3937 0.46 DDA3937_RS13185 cytochrome b 0.73 DDA3937_RS15480 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 74
Pseudomonas putida KT2440 0.46 PP_4982 putative cytochrome b561, iron-regulated 0.54 PP_0850 Dual-specificity RNA methyltransferase RlmN low > 96
Serratia liquefaciens MT49 0.46 IAI46_09695 cytochrome b 0.73 IAI46_19290 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 86
Pseudomonas simiae WCS417 0.45 PS417_26535 cytochrome B561 0.55 PS417_23160 50S rRNA methyltransferase low > 88
Pectobacterium carotovorum WPP14 0.45 HER17_RS08580 cytochrome b 0.73 HER17_RS06085 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 75
Enterobacter sp. TBS_079 0.45 MPMX20_01737 Cytochrome b561 0.74 MPMX20_03395 Dual-specificity RNA methyltransferase RlmN low > 85
Pseudomonas sp. DMC3 0.45 GFF176 Cytochrome b561 0.54 GFF4342 Dual-specificity RNA methyltransferase RlmN low > 89
Escherichia coli ECOR38 0.45 HEPCGN_23735 yceJ Cytochrome b561-like protein 0.74 HEPCGN_20830 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 87
Escherichia coli ECRC101 0.45 MCAODC_23115 yceJ Cytochrome b561-like protein 0.74 MCAODC_12240 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02608 Cytochrome b561 0.74 OHPLBJKB_01192 Dual-specificity RNA methyltransferase RlmN low > 73
Escherichia coli ECRC98 0.45 JDDGAC_07415 yceJ Cytochrome b561-like protein 0.74 JDDGAC_25385 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.55 68
Escherichia coli ECRC62 0.45 BNILDI_19445 yceJ Cytochrome b561-like protein 0.74 BNILDI_12160 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 75
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_2380 Cytochrome B561 0.54 Pf1N1B4_857 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS28190 cytochrome b 0.55 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS28190 cytochrome b 0.55 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Escherichia coli ECRC102 0.45 NIAGMN_24075 yceJ Cytochrome b561-like protein 0.74 NIAGMN_19480 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECOR27 0.45 NOLOHH_21285 yceJ Cytochrome b561-like protein 0.74 NOLOHH_13360 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 75
Escherichia coli ECRC100 0.45 OKFHMN_03755 yceJ Cytochrome b561-like protein 0.74 OKFHMN_21710 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 80
Escherichia coli ECRC99 0.45 KEDOAH_24000 yceJ Cytochrome b561-like protein 0.74 KEDOAH_06510 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia fergusonii Becca 0.45 EFB2_02917 Cytochrome b561 0.74 EFB2_01373 Dual-specificity RNA methyltransferase RlmN low > 86
Escherichia coli BL21 0.45 ECD_01053 putative cytochrome b561 0.74 ECD_02409 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent low > 61
Escherichia coli Nissle 1917 0.45 ECOLIN_RS06135 cytochrome b 0.74 ECOLIN_RS14300 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_08040 cytochrome B 0.55 AO353_15875 23S rRNA (adenine(2503)-C2)-methyltransferase low > 101
Escherichia coli BW25113 0.45 b1057 yceJ predicted cytochrome b561 (NCBI) 0.74 b2517 yfgB predicted enzyme (NCBI) low > 76
Erwinia amylovora T8 0.45 OLJFJH_15690 cytochrome b 0.73 OLJFJH_10435 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 58
Dickeya dianthicola ME23 0.44 DZA65_RS13725 cytochrome b 0.73 DZA65_RS16665 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS13250 cytochrome b 0.73 HGI48_RS15590 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF3336 Cytochrome B561 0.74 GFF2414 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 78
Enterobacter asburiae PDN3 0.43 EX28DRAFT_1874 Cytochrome B561 0.74 EX28DRAFT_0126 23S rRNA (adenine(2503)-C(2))-methyltransferase low > 76
Pseudomonas sp. SVBP6 0.43 COO64_RS17460 cytochrome b 0.55 COO64_RS03935 rlmN 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 93
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0456 Cytochrome B561, bacterial 0.55 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0456 Cytochrome B561, bacterial 0.55 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase low > 86
Pantoea sp. MT58 0.42 IAI47_12240 cytochrome b 0.73 IAI47_05040 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 76
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_1046 Cytochrome B561 0.54 PfGW456L13_4865 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 87
Erwinia tracheiphila SCR3 0.39 LU632_RS10310 cytochrome b 0.74 LU632_RS17815 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 74
Shewanella amazonensis SB2B 0.36 Sama_0949 cytochrome b561 (RefSeq) 0.69 Sama_2368 hypothetical protein (RefSeq) low > 62
Rhodospirillum rubrum S1H 0.30 Rru_A3682 Cytochrome B561 (NCBI) 0.40 Rru_A3329 hypothetical protein (NCBI) low > 58
Kangiella aquimarina DSM 16071 0.24 B158DRAFT_0324 Cytochrome B561 0.55 B158DRAFT_1149 23S rRNA m2A2503 methyltransferase low > 40
Xanthobacter sp. DMC5 0.21 GFF3925 Cytochrome b561 0.36 GFF1781 Dual-specificity RNA methyltransferase RlmN — —
Castellaniella sp019104865 MT123 0.20 ABCV34_RS06055 cytochrome b 0.43 ABCV34_RS02610 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 48
Agrobacterium fabrum C58 0.20 Atu1483 cytochrome b561 0.37 Atu2673 hypothetical protein low > 89
Acinetobacter radioresistens SK82 0.19 MPMX26_01603 Cytochrome b561 0.50 MPMX26_00426 Dual-specificity RNA methyltransferase RlmN — —
Variovorax sp. SCN45 0.17 GFF695 Cytochrome B561 0.47 GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) low > 127
Azospirillum brasilense Sp245 0.16 AZOBR_RS21975 hypothetical protein 0.38 AZOBR_RS00800 50S rRNA methyltransferase low > 97
Bosea sp. OAE506 0.15 ABIE41_RS11040 cytochrome b/b6 domain-containing protein 0.36 ABIE41_RS04880 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 77

Not shown: 0 genomes with orthologs for CSW01_16925 only; 52 genomes with orthologs for CSW01_03930 only