Conservation of cofitness between CSW01_16960 and CSW01_03700 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_16960 DUF475 domain-containing protein 1.0 CSW01_03700 multi-copper polyphenol oxidoreductase 0.61 10
Desulfovibrio vulgaris Hildenborough JW710 0.38 DVU0567 TerC family protein (TIGR) 0.20 DVU0365 conserved hypothetical protein (TIGR) low > 55
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.5396.1 export protein 0.37 Xcc-8004.1363.1 COG1496: Uncharacterized conserved protein — —
Dickeya dianthicola ME23 0.37 DZA65_RS02990 TerC family protein 0.49 DZA65_RS17325 polyphenol oxidase low > 75
Dickeya dianthicola 67-19 0.37 HGI48_RS02820 TerC family protein 0.48 HGI48_RS16230 polyphenol oxidase low > 71
Erwinia tracheiphila SCR3 0.36 LU632_RS02315 TerC family protein 0.44 LU632_RS16940 pgeF polyphenol oxidase low > 73
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS11540 TerC family protein 0.45 PagCFBP13505_RS16535 polyphenol oxidase low > 74
Pantoea sp. MT58 0.36 IAI47_02930 TerC family protein 0.44 IAI47_04430 polyphenol oxidase low > 76
Pseudomonas sp. DMC3 0.36 GFF1785 Putative membrane-bound redox modulator Alx 0.43 GFF4005 Polyphenol oxidase low > 89
Erwinia tracheiphila HP pepo 2.2 0.36 IJEDHG_06595 Integral membrane protein TerC family 0.44 IJEDHG_26865 yfiH purine nucleoside phosphorylase YfiH low > 61
Dickeya dadantii 3937 0.36 DDA3937_RS02845 TerC family protein 0.49 DDA3937_RS16105 polyphenol oxidase low > 74
Rahnella sp. WP5 0.36 EX31_RS08370 TerC family protein 0.42 EX31_RS07565 polyphenol oxidase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF3190 Integral membrane protein TerC 0.47 GFF4183 COG1496: Uncharacterized conserved protein low > 78
Klebsiella michiganensis M5al 0.35 BWI76_RS24710 membrane protein 0.47 BWI76_RS21445 hypothetical protein low > 92
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_5047 Integral membrane protein TerC 0.44 Pf1N1B4_2823 COG1496: Uncharacterized conserved protein low > 87
Escherichia coli ECRC102 0.35 NIAGMN_16305 alx TerC family membrane protein Alx 0.47 NIAGMN_19025 yfiH purine nucleoside phosphorylase YfiH 0.54 21
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00614 Putative membrane-bound redox modulator Alx 0.46 OHPLBJKB_01113 Polyphenol oxidase low > 74
Escherichia coli BL21 0.35 ECD_02957 putative membrane-bound redox modulator 0.47 ECD_02483 UPF0124 family protein low > 61
Escherichia coli ECOR27 0.35 NOLOHH_10340 alx TerC family membrane protein Alx 0.47 NOLOHH_12930 yfiH purine nucleoside phosphorylase YfiH low > 76
Escherichia fergusonii Becca 0.35 EFB2_00724 Putative membrane-bound redox modulator Alx 0.47 EFB2_01297 Polyphenol oxidase low > 86
Escherichia coli BW25113 0.35 b3088 alx predicted inner membrane protein, part of terminus (NCBI) 0.47 b2593 yfiH hypothetical protein (NCBI) low > 76
Escherichia coli ECRC100 0.35 OKFHMN_18540 alx TerC family membrane protein Alx 0.47 OKFHMN_21255 yfiH purine nucleoside phosphorylase YfiH low > 79
Escherichia coli ECRC101 0.35 MCAODC_09055 alx TerC family membrane protein Alx 0.47 MCAODC_11785 yfiH purine nucleoside phosphorylase YfiH low > 87
Escherichia coli Nissle 1917 0.35 ECOLIN_RS17810 TerC family membrane protein Alx 0.47 ECOLIN_RS14670 purine nucleoside phosphorylase YfiH low > 55
Escherichia coli ECRC98 0.35 JDDGAC_22175 alx TerC family membrane protein Alx 0.47 JDDGAC_24920 yfiH purine nucleoside phosphorylase YfiH low > 87
Escherichia coli ECRC62 0.35 BNILDI_01175 alx TerC family membrane protein Alx 0.46 BNILDI_11735 yfiH purine nucleoside phosphorylase YfiH low > 75
Escherichia coli ECOR38 0.35 HEPCGN_17395 alx TerC family membrane protein Alx 0.47 HEPCGN_20380 yfiH purine nucleoside phosphorylase YfiH low > 88
Escherichia coli ECRC99 0.35 KEDOAH_09605 alx TerC family membrane protein Alx 0.47 KEDOAH_06965 yfiH purine nucleoside phosphorylase YfiH — —
Dechlorosoma suillum PS 0.35 Dsui_3091 integral membrane protein, TerC family 0.47 Dsui_2531 uncharacterized protein, YfiH family low > 51
Pectobacterium carotovorum WPP14 0.35 HER17_RS18690 TerC family protein 0.44 HER17_RS05405 polyphenol oxidase low > 75
Klebsiella pneumoniae MKP103 0.35 KDGMDA_05575 Integral membrane protein TerC family 0.47 KDGMDA_02135 purine nucleoside phosphorylase YfiH 0.26 89
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3157 integral membrane protein, TerC family 0.48 EX28DRAFT_2694 YfiH family protein low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1951 Integral membrane protein TerC 0.35 GFF4798 COG1496: Uncharacterized conserved protein — —
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS19605 membrane protein 0.42 HSERO_RS15065 laccase low > 78
Erwinia amylovora T8 0.34 OLJFJH_02200 Integral membrane protein TerC family 0.47 OLJFJH_09730 purine nucleoside phosphorylase YfiH low > 58
Enterobacter sp. TBS_079 0.34 MPMX20_03998 Putative membrane-bound redox modulator Alx 0.47 MPMX20_03462 Polyphenol oxidase low > 85
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_2898 Integral membrane protein TerC 0.43 PfGW456L13_1494 COG1496: Uncharacterized conserved protein low > 87
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_1240 Integral membrane protein TerC (RefSeq) 0.19 DvMF_2317 protein of unknown function DUF152 (RefSeq) low > 51
Azospirillum brasilense Sp245 0.34 AZOBR_RS19170 membrane protein 0.23 AZOBR_RS31175 polyphenol oxidase low > 97
Bosea sp. OAE506 0.34 ABIE41_RS18605 TerC family protein 0.26 ABIE41_RS11450 peptidoglycan editing factor PgeF low > 77
Pseudomonas putida KT2440 0.34 PP_3305 Membrane protein, TerC family 0.45 PP_0624 Uncharacterized protein YfiH low > 96
Acinetobacter radioresistens SK82 0.34 MPMX26_03061 Putative membrane-bound redox modulator Alx 0.31 MPMX26_00736 Polyphenol oxidase low > 36
Serratia liquefaciens MT49 0.34 IAI46_22205 TerC family protein 0.48 IAI46_03990 polyphenol oxidase low > 87
Shewanella amazonensis SB2B 0.33 Sama_0510 hypothetical protein (RefSeq) 0.41 Sama_2604 hypothetical protein (RefSeq) low > 62
Rhodospirillum rubrum S1H 0.33 Rru_A3680 Integral membrane protein TerC (NCBI) 0.29 Rru_A0643 Protein of unknown function DUF152 (NCBI) low > 58
Sphingobium sp. HT1-2 0.33 GFF4429 Integral membrane protein TerC 0.24 GFF3355 FIG00003370: Multicopper polyphenol oxidase low > 95
Rhizobium sp. OAE497 0.33 ABIE40_RS29275 TerC family protein 0.27 ABIE40_RS13030 peptidoglycan editing factor PgeF low > 107
Agrobacterium fabrum C58 0.33 Atu1861 transporter 0.25 Atu2215 hypothetical protein low > 89
Pseudomonas sp. S08-1 0.33 OH686_00895 Integral membrane protein TerC 0.43 OH686_16415 Multicopper polyphenol oxidase low > 80
Pseudomonas aeruginosa MRSN321 0.33 DY961_RS04885 TerC family protein 0.45 DY961_RS23735 pgeF;inference=COORDINATES peptidoglycan editing factor PgeF low > 100
Pseudomonas aeruginosa PA14 0.33 IKLFDK_12530 Integral membrane protein TerC family 0.46 IKLFDK_00815 peptidoglycan editing factor PgeF low > 98
Pseudomonas aeruginosa PUPa3 0.33 DQ20_RS35785 TerC family protein 0.46 DQ20_RS56200 pgeF;inference=COORDINATES peptidoglycan editing factor PgeF low > 101
Pseudomonas sp. SVBP6 0.32 COO64_RS24415 TerC family protein 0.46 COO64_RS11060 pgeF peptidoglycan editing factor PgeF low > 93
Acinetobacter baumannii LAC-4 0.32 RR41_RS18955 TerC family protein 0.32 RR41_RS15065 peptidoglycan editing factor PgeF low > 55
Acidovorax sp. GW101-3H11 0.31 Ac3H11_884 Export protein 0.38 Ac3H11_2305 COG1496: Uncharacterized conserved protein 0.34 4
Azospirillum sp. SherDot2 0.31 MPMX19_01049 Putative membrane-bound redox modulator Alx 0.23 MPMX19_01826 Polyphenol oxidase low > 112
Shewanella sp. ANA-3 0.31 Shewana3_2710 integral membrane protein TerC (RefSeq) 0.42 Shewana3_3170 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.31 SO1747 membrane protein, putative (NCBI ptt file) 0.41 SO3578 conserved hypothetical protein TIGR00726 (NCBI ptt file) — —
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03796 tellurium resistance protein terC 0.25 CCNA_00523 multicopper polyphenol oxidase low > 67
Caulobacter crescentus NA1000 0.30 CCNA_03796 tellurium resistance protein terC 0.25 CCNA_00523 multicopper polyphenol oxidase low > 66
Xanthobacter sp. DMC5 0.28 GFF1819 Putative membrane-bound redox modulator Alx 0.28 GFF1931 Polyphenol oxidase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_0811 Integral membrane protein TerC 0.45 Psyr_0727 Protein of unknown function DUF152 low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_0811 Integral membrane protein TerC 0.45 Psyr_0727 Protein of unknown function DUF152 low > 86
Pseudomonas segetis P6 0.27 MPMX49_01886 hypothetical protein 0.47 MPMX49_03921 Polyphenol oxidase low > 75

Not shown: 5 genomes with orthologs for CSW01_16960 only; 49 genomes with orthologs for CSW01_03700 only