| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_01825 | | DNA mismatch repair protein MutL | 1.0 | CSW01_02835 | | RNA polymerase sigma factor RpoS | 0.55 | 5 |
| Pantoea sp. MT58 | 0.46 | IAI47_02580 | | DNA mismatch repair endonuclease MutL | 0.71 | IAI47_04235 | | RNA polymerase sigma factor RpoS | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.46 | LU632_RS02045 | mutL | DNA mismatch repair endonuclease MutL | 0.69 | LU632_RS06480 | rpoS | RNA polymerase sigma factor RpoS | low | > 74 |
| Erwinia amylovora T8 | 0.45 | OLJFJH_02510 | | DNA mismatch repair endonuclease MutL | 0.70 | OLJFJH_09380 | | RNA polymerase sigma factor RpoS | low | > 58 |
| Dickeya dadantii 3937 | 0.45 | DDA3937_RS18620 | | DNA mismatch repair endonuclease MutL | 0.69 | DDA3937_RS16875 | | RNA polymerase sigma factor RpoS | — | — |
| Serratia liquefaciens MT49 | 0.45 | IAI46_01615 | | DNA mismatch repair endonuclease MutL | 0.70 | IAI46_03790 | | RNA polymerase sigma factor RpoS | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.44 | HER17_RS02575 | | DNA mismatch repair endonuclease MutL | 0.68 | HER17_RS04350 | | RNA polymerase sigma factor RpoS | low | > 75 |
| Dickeya dianthicola 67-19 | 0.44 | HGI48_RS18555 | | DNA mismatch repair endonuclease MutL | 0.68 | HGI48_RS16945 | | RNA polymerase sigma factor RpoS | low | > 71 |
| Dickeya dianthicola ME23 | 0.44 | DZA65_RS19690 | | DNA mismatch repair endonuclease MutL | 0.68 | DZA65_RS18020 | | RNA polymerase sigma factor RpoS | low | > 75 |
| Enterobacter sp. TBS_079 | 0.44 | MPMX20_00451 | | DNA mismatch repair protein MutL | 0.70 | MPMX20_03627 | | RNA polymerase sigma factor RpoS | 0.21 | 21 |
| Rahnella sp. WP5 | 0.44 | EX31_RS08830 | | DNA mismatch repair endonuclease MutL | 0.70 | EX31_RS07825 | | RNA polymerase sigma factor RpoS | low | > 89 |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_3367 | | DNA mismatch repair protein MutL | 0.70 | EX28DRAFT_2837 | | RNA polymerase, sigma 38 subunit, RpoS | low | > 76 |
| Klebsiella michiganensis M5al | 0.44 | BWI76_RS02525 | | DNA mismatch repair protein MutL | 0.70 | BWI76_RS22645 | | RNA polymerase sigma factor RpoS | 0.24 | 45 |
| Escherichia fergusonii Becca | 0.44 | EFB2_04365 | | DNA mismatch repair protein MutL | 0.70 | EFB2_01169 | | RNA polymerase sigma factor RpoS | low | > 86 |
| Escherichia coli BW25113 | 0.44 | b4170 | mutL | DNA mismatch repair protein (NCBI) | 0.70 | b2741 | rpoS | RNA polymerase sigma factor (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.44 | ECD_04037 | | methyl-directed mismatch repair protein | 0.70 | ECD_02591 | | RNA polymerase, sigma S (sigma 38) factor | low | > 61 |
| Escherichia coli ECRC62 | 0.43 | BNILDI_06960 | mutL | DNA mismatch repair endonuclease MutL | 0.70 | BNILDI_10860 | rpoS | RNA polymerase sigma factor RpoS | low | > 75 |
| Escherichia coli ECRC102 | 0.43 | NIAGMN_10115 | mutL | DNA mismatch repair endonuclease MutL | 0.70 | NIAGMN_18265 | rpoS | RNA polymerase sigma factor RpoS | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.43 | OHPLBJKB_03872 | | DNA mismatch repair protein MutL | 0.70 | OHPLBJKB_00992 | | RNA polymerase sigma factor RpoS | low | > 73 |
| Escherichia coli ECOR27 | 0.43 | NOLOHH_04530 | mutL | DNA mismatch repair endonuclease MutL | 0.70 | NOLOHH_12310 | rpoS | RNA polymerase sigma factor RpoS | low | > 75 |
| Escherichia coli ECOR38 | 0.43 | HEPCGN_10495 | mutL | DNA mismatch repair endonuclease MutL | 0.70 | HEPCGN_19675 | rpoS | RNA polymerase sigma factor RpoS | low | > 87 |
| Escherichia coli ECRC101 | 0.43 | MCAODC_02780 | mutL | DNA mismatch repair endonuclease MutL | 0.70 | MCAODC_11020 | rpoS | RNA polymerase sigma factor RpoS | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.43 | GFF823 | | DNA mismatch repair protein MutL | 0.70 | GFF4788 | | RNA polymerase sigma factor RpoS | low | > 78 |
| Escherichia coli ECRC100 | 0.43 | OKFHMN_12265 | mutL | DNA mismatch repair endonuclease MutL | 0.70 | OKFHMN_20495 | rpoS | RNA polymerase sigma factor RpoS | low | > 80 |
| Escherichia coli ECRC98 | 0.43 | JDDGAC_15905 | mutL | DNA mismatch repair endonuclease MutL | 0.70 | JDDGAC_24160 | rpoS | RNA polymerase sigma factor RpoS | low | > 86 |
| Shewanella loihica PV-4 | 0.37 | Shew_0564 | | DNA mismatch repair protein MutL (RefSeq) | 0.68 | Shew_1213 | | RpoD family RNA polymerase sigma factor (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_0595 | mutL | DNA mismatch repair protein (RefSeq) | 0.66 | Shewana3_1124 | | RNA polymerase, sigma 38 subunit, RpoS (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.37 | SO0601 | mutL | DNA mismatch repair protein MutL (NCBI ptt file) | 0.66 | SO3432 | rpoS | RNA polymerase sigma-38 factor (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.36 | Sama_3027 | mutL | DNA mismatch repair protein (RefSeq) | 0.68 | Sama_1044 | | RNA polymerase sigma-38 factor (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.35 | HP15_2501 | | DNA mismatch repair protein mutL | 0.62 | HP15_1283 | | RNA polymerase, sigma 70 subunit, RpoD family | low | > 73 |
| Pseudomonas sp. S08-1 | 0.35 | OH686_09480 | | DNA mismatch repair protein MutL | 0.62 | OH686_18185 | | RNA polymerase sigma factor RpoS | low | > 80 |
| Pseudomonas simiae WCS417 | 0.35 | PS417_02480 | | DNA mismatch repair protein | 0.62 | PS417_06365 | | RNA polymerase sigma factor | 0.22 | 69 |
| Pseudomonas fluorescens SBW25 | 0.35 | PFLU_RS02560 | | DNA mismatch repair endonuclease MutL | 0.62 | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.35 | PFLU_RS02560 | | DNA mismatch repair endonuclease MutL | 0.62 | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.35 | Pf6N2E2_3616 | | DNA mismatch repair protein MutL | 0.62 | Pf6N2E2_3037 | | RNA polymerase sigma factor RpoS | 0.22 | 65 |
| Pseudomonas fluorescens FW300-N1B4 | 0.34 | Pf1N1B4_1414 | | DNA mismatch repair protein MutL | 0.62 | Pf1N1B4_3115 | | RNA polymerase sigma factor RpoS | 0.27 | 71 |
| Pseudomonas sp. RS175 | 0.34 | PFR28_05119 | | DNA mismatch repair protein MutL | 0.62 | PFR28_00427 | | RNA polymerase sigma factor RpoS | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.34 | AO353_13135 | | DNA mismatch repair protein | 0.63 | AO353_16615 | | RNA polymerase sigma factor RpoS | low | > 101 |
| Pseudomonas sp. BP01 | 0.34 | JOY50_RS17220 | mutL | DNA mismatch repair endonuclease MutL | 0.63 | JOY50_RS23755 | rpoS | RNA polymerase sigma factor RpoS | low | > 84 |
| Pseudomonas syringae pv. syringae B728a | 0.34 | Psyr_0570 | | DNA mismatch repair protein MutL | 0.62 | Psyr_1374 | | RNA polymerase, sigma 38 subunit, RpoS | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.34 | Psyr_0570 | | DNA mismatch repair protein MutL | 0.62 | Psyr_1374 | | RNA polymerase, sigma 38 subunit, RpoS | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.34 | PfGW456L13_156 | | DNA mismatch repair protein MutL | 0.62 | PfGW456L13_4674 | | RNA polymerase sigma factor RpoS | low | > 87 |
| Pseudomonas putida KT2440 | 0.34 | PP_4896 | | DNA mismatch repair protein MutL | 0.63 | PP_1623 | | RNA polymerase, sigma S (sigma 38) factor | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.33 | AO356_08665 | | DNA mismatch repair protein | 0.62 | AO356_05885 | | RNA polymerase sigma factor RpoS | low | > 104 |
| Alteromonas macleodii MIT1002 | 0.32 | MIT1002_03790 | | DNA mismatch repair protein MutL | 0.69 | MIT1002_00625 | | RNA polymerase sigma factor RpoS | low | > 70 |
| Pseudomonas aeruginosa PA14 | 0.32 | IKLFDK_28810 | | DNA mismatch repair endonuclease MutL | 0.62 | IKLFDK_18495 | | RNA polymerase sigma factor RpoS | low | > 101 |
| Pseudomonas sp. DMC3 | 0.32 | GFF3218 | | DNA mismatch repair protein MutL | 0.62 | GFF2084 | | RNA polymerase sigma factor RpoS | 0.47 | 85 |
| Dechlorosoma suillum PS | 0.27 | Dsui_1551 | | DNA mismatch repair protein MutL | 0.44 | Dsui_1971 | | RNA polymerase sigma factor RpoS | low | > 51 |
| Herbaspirillum seropedicae SmR1 | 0.26 | HSERO_RS04190 | | DNA mismatch repair protein | 0.44 | HSERO_RS14830 | | RNA polymerase sigma factor RpoS | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.25 | QEN71_RS26435 | | DNA mismatch repair endonuclease MutL | 0.38 | QEN71_RS22240 | | RNA polymerase sigma factor RpoS | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.25 | H281DRAFT_04712 | | DNA mismatch repair protein MutL | 0.38 | H281DRAFT_00844 | | RNA polymerase, sigma 38 subunit, RpoS | — | — |
| Variovorax sp. SCN45 | 0.24 | GFF4800 | | DNA mismatch repair protein MutL | 0.34 | GFF2842 | | RNA polymerase sigma factor RpoS | low | > 127 |
| Burkholderia phytofirmans PsJN | 0.23 | BPHYT_RS03650 | | DNA mismatch repair protein | 0.38 | BPHYT_RS09115 | | RNA polymerase sigma factor RpoS | low | > 109 |
Not shown: 43 genomes with orthologs for CSW01_01825 only; 3 genomes with orthologs for CSW01_02835 only