Conservation of cofitness between CSW01_01980 and CSW01_02530 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01980 transcriptional regulator Zur 1.0 CSW01_02530 D-erythrose-4-phosphate dehydrogenase 0.82 19
Erwinia tracheiphila SCR3 0.49 LU632_RS22295 zur zinc uptake transcriptional repressor Zur 0.67 LU632_RS05535 epd erythrose-4-phosphate dehydrogenase low > 73
Pectobacterium carotovorum WPP14 0.48 HER17_RS18780 zinc uptake transcriptional repressor Zur 0.69 HER17_RS02685 erythrose-4-phosphate dehydrogenase low > 75
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_08440 zur zinc uptake transcriptional repressor Zur 0.67 IJEDHG_03375 epd erythrose-4-phosphate dehydrogenase low > 61
Pantoea agglomerans CFBP13505 P0401 0.47 PagCFBP13505_RS21200 zinc uptake transcriptional repressor Zur 0.69 PagCFBP13505_RS16015 erythrose-4-phosphate dehydrogenase low > 74
Dickeya dadantii 3937 0.46 DDA3937_RS02765 zinc uptake transcriptional repressor Zur 0.68 DDA3937_RS18520 erythrose-4-phosphate dehydrogenase low > 74
Rahnella sp. WP5 0.46 EX31_RS11860 zinc uptake transcriptional repressor Zur 0.69 EX31_RS21405 erythrose-4-phosphate dehydrogenase low > 89
Pantoea sp. MT58 0.46 IAI47_17875 zinc uptake transcriptional repressor Zur 0.69 IAI47_03685 erythrose-4-phosphate dehydrogenase low > 76
Enterobacter asburiae PDN3 0.46 EX28DRAFT_4266 Fe2+/Zn2+ uptake regulation proteins 0.70 EX28DRAFT_2973 erythrose-4-phosphate dehydrogenase low > 76
Dickeya dianthicola ME23 0.45 DZA65_RS02895 zinc uptake transcriptional repressor Zur 0.68 DZA65_RS19580 erythrose-4-phosphate dehydrogenase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03997 Zinc uptake regulation protein 0.70 OHPLBJKB_00789 D-erythrose-4-phosphate dehydrogenase low > 74
Escherichia coli ECOR38 0.45 HEPCGN_11570 zur zinc uptake transcriptional repressor Zur 0.70 HEPCGN_18695 epd erythrose-4-phosphate dehydrogenase low > 88
Escherichia coli BL21 0.45 ECD_03918 transcriptional repressor, Zn(II)-binding 0.70 ECD_02758 D-erythrose 4-phosphate dehydrogenase low > 61
Escherichia coli BW25113 0.45 b4046 yjbK putative regulator (VIMSS) 0.70 b2927 epd D-erythrose 4-phosphate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 0.45 BNILDI_06315 zur zinc uptake transcriptional repressor Zur 0.70 BNILDI_09835 epd erythrose-4-phosphate dehydrogenase low > 75
Escherichia coli ECOR27 0.45 NOLOHH_05205 zur zinc uptake transcriptional repressor Zur 0.70 NOLOHH_11295 epd erythrose-4-phosphate dehydrogenase low > 76
Erwinia amylovora T8 0.45 OLJFJH_03565 zinc uptake transcriptional repressor Zur 0.68 OLJFJH_08650 erythrose-4-phosphate dehydrogenase low > 58
Enterobacter sp. TBS_079 0.45 MPMX20_00262 Zinc uptake regulation protein 0.70 MPMX20_03779 D-erythrose-4-phosphate dehydrogenase low > 85
Dickeya dianthicola 67-19 0.45 HGI48_RS02740 zinc uptake transcriptional repressor Zur 0.68 HGI48_RS18445 erythrose-4-phosphate dehydrogenase low > 71
Serratia liquefaciens MT49 0.45 IAI46_22990 zinc uptake transcriptional repressor Zur 0.67 IAI46_21015 erythrose-4-phosphate dehydrogenase low > 87
Escherichia coli ECRC99 0.45 KEDOAH_15110 zur zinc uptake transcriptional repressor Zur 0.70 KEDOAH_08755 epd erythrose-4-phosphate dehydrogenase — —
Escherichia coli ECRC100 0.45 OKFHMN_13050 zur zinc uptake transcriptional repressor Zur 0.70 OKFHMN_19385 epd erythrose-4-phosphate dehydrogenase low > 79
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF1416 Zinc uptake regulation protein ZUR 0.72 GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) low > 78
Escherichia coli ECRC98 0.45 JDDGAC_16675 zur zinc uptake transcriptional repressor Zur 0.70 JDDGAC_23015 epd erythrose-4-phosphate dehydrogenase low > 87
Escherichia coli ECRC101 0.45 MCAODC_03550 zur zinc uptake transcriptional repressor Zur 0.70 MCAODC_09905 epd erythrose-4-phosphate dehydrogenase low > 87
Escherichia coli ECRC102 0.45 NIAGMN_10800 zur zinc uptake transcriptional repressor Zur 0.70 NIAGMN_17150 epd erythrose-4-phosphate dehydrogenase low > 80
Escherichia coli Nissle 1917 0.45 ECOLIN_RS23350 zinc uptake transcriptional repressor Zur 0.70 ECOLIN_RS16265 erythrose-4-phosphate dehydrogenase low > 55
Escherichia fergusonii Becca 0.45 EFB2_04557 Zinc uptake regulation protein 0.71 EFB2_00979 D-erythrose-4-phosphate dehydrogenase low > 86
Klebsiella pneumoniae MKP103 0.44 KDGMDA_10345 zinc uptake transcriptional repressor Zur 0.70 KDGMDA_04460 erythrose-4-phosphate dehydrogenase low > 95
Klebsiella michiganensis M5al 0.44 BWI76_RS01890 transcriptional regulator Zur 0.70 BWI76_RS23985 erythrose-4-phosphate dehydrogenase low > 92
Alteromonas macleodii MIT1002 0.42 MIT1002_03799 Zinc uptake regulation protein 0.67 MIT1002_00862 D-erythrose-4-phosphate dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS02580 Fur family transcriptional regulator 0.50 QEN71_RS27005 type I glyceraldehyde-3-phosphate dehydrogenase low > 153
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS16125 Fur family transcriptional regulator 0.49 BPHYT_RS16835 glyceraldehyde-3-phosphate dehydrogenase low > 109
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS07900 transcriptional repressor 0.48 ABZR86_RS18615 type I glyceraldehyde-3-phosphate dehydrogenase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04161 ferric uptake regulator, Fur family 0.49 H281DRAFT_06315 glyceraldehyde-3-phosphate dehydrogenase (NAD+) low > 103
Azospirillum sp. SherDot2 0.35 MPMX19_01585 Zinc uptake regulation protein 0.46 MPMX19_00689 Glyceraldehyde-3-phosphate dehydrogenase 1 0.26 111
Castellaniella sp019104865 MT123 0.34 ABCV34_RS13430 Fur family transcriptional regulator 0.49 ABCV34_RS15455 type I glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas sp. RS175 0.34 PFR28_04620 Zinc uptake regulation protein 0.49 PFR28_04187 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4166 Zinc uptake regulation protein ZUR 0.48 Pf6N2E2_4656 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas orientalis W4I3 0.33 QF045_RS03330 zinc uptake transcriptional repressor Zur 0.48 QF045_RS00835 erythrose-4-phosphate dehydrogenase low > 93
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_11485 Fur family transcriptional regulator 0.49 AO356_13685 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas sp. BP01 0.33 JOY50_RS21130 zur zinc uptake transcriptional repressor Zur 0.49 JOY50_RS09875 epd erythrose-4-phosphate dehydrogenase — —
Pseudomonas sp. SVBP6 0.33 COO64_RS02455 zur zinc uptake transcriptional repressor Zur 0.48 COO64_RS17560 epd erythrose-4-phosphate dehydrogenase — —
Pseudomonas aeruginosa MRSN321 0.33 DY961_RS25795 zur;inference=COORDINATES zinc uptake transcriptional repressor Zur 0.48 DY961_RS22775 epd;go_function=erythrose-4-phosphate erythrose-4-phosphate dehydrogenase low > 100
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_598 Zinc uptake regulation protein ZUR 0.49 PfGW456L13_1065 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas aeruginosa PUPa3 0.33 DQ20_RS58225 zur;inference=COORDINATES zinc uptake transcriptional repressor Zur 0.48 DQ20_RS36565 epd;go_function=erythrose-4-phosphate erythrose-4-phosphate dehydrogenase — —
Pseudomonas putida KT2440 0.33 PP_0119 putative zinc uptake regulation protein ZUR 0.49 PP_4964 D-erythrose 4-phosphate dehydrogenase low > 96
Pseudomonas aeruginosa PA14 0.33 IKLFDK_25915 zinc uptake transcriptional repressor Zur 0.48 IKLFDK_22670 erythrose-4-phosphate dehydrogenase low > 98
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1871 Zinc uptake regulation protein ZUR 0.49 Pf1N1B4_2398 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas sp. DMC3 0.32 GFF635 Zinc uptake regulation protein 0.49 GFF157 D-erythrose-4-phosphate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.32 TX73_002680 Fur family transcriptional regulator 0.48 TX73_004865 type I glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas sp. S08-1 0.32 OH686_12240 Zinc uptake regulation protein Zur 0.48 OH686_10765 erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_10910 Fur family transcriptional regulator 0.49 AO353_07950 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas segetis P6 0.32 MPMX49_00325 Zinc uptake regulation protein 0.48 MPMX49_00654 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas simiae WCS417 0.32 PS417_00385 Fur family transcriptional regulator 0.49 PS417_26435 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.32 PFLU_RS00375 transcriptional repressor 0.49 PFLU_RS28090 erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS00375 transcriptional repressor 0.49 PFLU_RS28090 erythrose-4-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0276 zinc uptake regulation protein, putative 0.48 Psyr_4791 D-erythrose-4-phosphate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0276 zinc uptake regulation protein, putative 0.48 Psyr_4791 D-erythrose-4-phosphate dehydrogenase — —
Acinetobacter baumannii LAC-4 0.31 RR41_RS18180 transcriptional repressor 0.44 RR41_RS10005 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.31 Psest_4308 Fe2+/Zn2+ uptake regulation proteins 0.48 Psest_0329 erythrose-4-phosphate dehydrogenase — —
Pseudomonas lactucae CFBP13502 0.31 GEMAOFIL_00280 Zinc uptake regulation protein 0.49 GEMAOFIL_05419 D-erythrose-4-phosphate dehydrogenase — —
Acinetobacter radioresistens SK82 0.31 MPMX26_00095 Zinc uptake regulation protein 0.44 MPMX26_01087 D-erythrose-4-phosphate dehydrogenase low > 36
Marinobacter adhaerens HP15 0.30 HP15_3521 zinc uptake regulation protein 0.53 HP15_2912 glyceraldehyde 3-phosphate dehydrogenase, type I — —
Rhizobium sp. OAE497 0.24 ABIE40_RS10935 Fur family transcriptional regulator 0.46 ABIE40_RS15870 type I glyceraldehyde-3-phosphate dehydrogenase — —

Not shown: 14 genomes with orthologs for CSW01_01980 only; 11 genomes with orthologs for CSW01_02530 only