| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07870 | | ABC transporter ATP-binding protein | 1.0 | CSW01_02455 | | YggS family pyridoxal phosphate enzyme | 0.59 | 11 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.58 | CA265_RS07485 | | macrolide ABC transporter ATP-binding protein | 0.29 | CA265_RS06285 | | YggS family pyridoxal phosphate enzyme | low | > 88 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.57 | ABZR88_RS13830 | | ABC transporter ATP-binding protein | 0.27 | ABZR88_RS11740 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 71 |
| Shewanella amazonensis SB2B | 0.57 | Sama_1468 | | putative macrolide efflux ABC transporter, ATP-binding protein (RefSeq) | 0.48 | Sama_2477 | | hypothetical protein (RefSeq) | low | > 62 |
| Synechococcus elongatus PCC 7942 | 0.56 | Synpcc7942_1414 | | ATPase | 0.25 | Synpcc7942_2060 | ylmE | hypothetical protein | low | > 38 |
| Bosea sp. OAE506 | 0.56 | ABIE41_RS12515 | | ABC transporter ATP-binding protein | 0.29 | ABIE41_RS04720 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 77 |
| Bacteroides ovatus ATCC 8483 | 0.55 | BACOVA_03963 | | ABC transporter, ATP-binding protein | 0.24 | BACOVA_00593 | | pyridoxal phosphate enzyme, YggS family | low | > 96 |
| Bacteroides stercoris CC31F | 0.55 | HMPREF1181_RS12480 | | ABC transporter ATP-binding protein | 0.24 | HMPREF1181_RS10865 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 56 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.55 | Echvi_2204 | | ABC-type antimicrobial peptide transport system, ATPase component | 0.26 | Echvi_2233 | | pyridoxal phosphate enzyme, YggS family | low | > 79 |
| Synechocystis sp000284455 PCC 6803 | 0.54 | SGL_RS16750 | | ABC transporter ATP-binding protein | 0.25 | SGL_RS16960 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 52 |
| Phocaeicola vulgatus CL09T03C04 | 0.54 | HMPREF1058_RS18065 | | ABC transporter ATP-binding protein | 0.26 | HMPREF1058_RS06240 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 67 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.54 | BT1214 | | putative ABC transporter ATP-binding protein (NCBI ptt file) | 0.27 | BT1332 | | conserved hypothetical protein (NCBI ptt file) | low | > 81 |
| Phocaeicola dorei CL03T12C01 | 0.54 | ABI39_RS14390 | | ABC transporter ATP-binding protein | 0.26 | ABI39_RS20000 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 72 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.54 | CA264_00165 | | macrolide ABC transporter ATP-binding protein | 0.26 | CA264_06410 | | YggS family pyridoxal phosphate enzyme | low | > 74 |
| Azospirillum sp. SherDot2 | 0.54 | MPMX19_01233 | | putative ABC transporter ATP-binding protein YknY | 0.30 | MPMX19_00050 | | Pyridoxal phosphate homeostasis protein | low | > 112 |
| Cellulophaga baltica 18 | 0.53 | M666_RS16560 | | ABC transporter ATP-binding protein | 0.29 | M666_RS17595 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 67 |
| Dechlorosoma suillum PS | 0.53 | Dsui_2877 | | ABC-type antimicrobial peptide transport system, ATPase component | 0.53 | Dsui_0603 | | pyridoxal phosphate enzyme, YggS family | low | > 51 |
| Lysobacter sp. OAE881 | 0.53 | ABIE51_RS05310 | | ABC transporter ATP-binding protein | 0.40 | ABIE51_RS16060 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 62 |
| Parabacteroides merdae CL09T00C40 | 0.52 | HMPREF1078_RS17380 | | ABC transporter ATP-binding protein | 0.27 | HMPREF1078_RS15965 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 61 |
| Fusobacterium nucleatum SB010 | 0.50 | HUW76_07080 | | ABC transporter ATP-binding protein | 0.27 | HUW76_07280 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 35 |
| Desulfovibrio vulgaris Miyazaki F | 0.50 | DvMF_2955 | | ABC transporter related (RefSeq) | 0.30 | DvMF_2208 | | alanine racemase domain protein (RefSeq) | low | > 51 |
| Rhizobium sp. OAE497 | 0.49 | ABIE40_RS09210 | | ABC transporter ATP-binding protein | 0.29 | ABIE40_RS19180 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Sphingobium sp. HT1-2 | 0.47 | GFF1551 | | ABC-type antimicrobial peptide transport system, ATPase component | 0.25 | GFF4152 | | Pyridoxal phosphate-containing protein YggS | low | > 95 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS24175 | | ABC transporter ATP-binding protein | 0.45 | RS_RS13435 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.46 | Xcc-8004.4556.1 | | Lipoprotein releasing system ATP-binding protein LolD | 0.39 | Xcc-8004.1711.1 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS03995 | | ABC transporter ATP-binding protein | 0.27 | ABZR86_RS09305 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.45 | Ga0059261_1321 | | ABC-type antimicrobial peptide transport system, ATPase component | 0.22 | Ga0059261_2216 | | pyridoxal phosphate enzyme, YggS family | low | > 68 |
| Bifidobacterium breve UCC2003 | 0.45 | BBR_RS13270 | | ABC transporter ATP-binding protein | 0.26 | BBR_RS11570 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 34 |
| Dickeya dianthicola 67-19 | 0.45 | HGI48_RS00415 | | ABC transporter ATP-binding protein | 0.61 | HGI48_RS17345 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 71 |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS06425 | | ABC transporter ATP-binding protein | 0.44 | RPSI07_RS11725 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 81 |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS12085 | | ABC transporter ATP-binding protein | 0.27 | LRK54_RS02905 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS11820 | | ABC transporter ATP-binding protein | 0.27 | LRK55_RS02655 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 63 |
| Rhodanobacter sp000427505 FW510-R12 | 0.45 | LRK53_RS05505 | | ABC transporter ATP-binding protein | 0.27 | LRK53_RS07085 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 59 |
| Rahnella sp. WP5 | 0.45 | EX31_RS02530 | | ABC transporter ATP-binding protein | 0.57 | EX31_RS02685 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 89 |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS21930 | | ABC transporter ATP-binding protein | 0.44 | UW163_RS08050 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Shewanella loihica PV-4 | 0.44 | Shew_0723 | | ABC transporter-related protein (RefSeq) | 0.55 | Shew_1137 | | alanine racemase domain-containing protein (RefSeq) | low | > 60 |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS17215 | | ABC transporter ATP-binding protein | 0.44 | RALBFv3_RS05575 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 76 |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_11330 | lolD | ABC transporter ATP-binding protein | 0.25 | OKGIIK_09885 | | Pyridoxal phosphate homeostasis protein | low | > 53 |
| Pseudomonas lactucae CFBP13502 | 0.42 | GEMAOFIL_03668 | | putative ABC transporter ATP-binding protein YknY | 0.50 | GEMAOFIL_05482 | | Pyridoxal phosphate homeostasis protein | — | — |
| Paraburkholderia graminis OAS925 | 0.41 | ABIE53_001326 | | putative ABC transport system ATP-binding protein | 0.50 | ABIE53_000841 | | pyridoxal phosphate enzyme (YggS family) | 0.25 | 11 |
| Magnetospirillum magneticum AMB-1 | 0.40 | AMB_RS12790 | | ABC transporter ATP-binding protein | 0.30 | AMB_RS00120 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 64 |
Not shown: 2 genomes with orthologs for CSW01_07870 only; 81 genomes with orthologs for CSW01_02455 only