Conservation of cofitness between CSW01_18075 and CSW01_02445 in Vibrio cholerae E7946 ATCC 55056

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18075 nucleotide sugar dehydrogenase 1.0 CSW01_02445 hypothetical protein 0.45 10
Dickeya dianthicola ME23 0.75 DZA65_RS07165 nucleotide sugar dehydrogenase 0.55 DZA65_RS18445 YggT family protein — —
Dickeya dianthicola 67-19 0.75 HGI48_RS06825 nucleotide sugar dehydrogenase 0.55 HGI48_RS17355 YggT family protein — —
Enterobacter sp. TBS_079 0.75 MPMX20_03011 UDP-glucose 6-dehydrogenase 0.50 MPMX20_03810 hypothetical protein — —
Dickeya dadantii 3937 0.75 DDA3937_RS06790 nucleotide sugar dehydrogenase 0.55 DDA3937_RS17310 YggT family protein — —
Klebsiella michiganensis M5al 0.74 BWI76_RS19020 UDP-glucose 6-dehydrogenase 0.54 BWI76_RS24105 resistance protein — —
Shewanella sp. ANA-3 0.74 Shewana3_1387 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) 0.51 Shewana3_1192 protein of unknown function YGGT (RefSeq) low > 73
Klebsiella pneumoniae MKP103 0.74 KDGMDA_26170 UDP-glucose 6-dehydrogenase 0.53 KDGMDA_04620 YGGT family — —
Methylophilus sp. DMC18 0.74 GFF701 UDP-glucose 6-dehydrogenase 0.23 GFF862 hypothetical protein — —
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0530 nucleotide sugar dehydrogenase 0.50 EX28DRAFT_2990 Predicted integral membrane protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01664 UDP-glucose 6-dehydrogenase 0.52 OHPLBJKB_00764 hypothetical protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF3904 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) 0.52 GFF3055 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) low > 78
Escherichia coli ECOR38 0.72 HEPCGN_03180 ugd UDP-glucose 6-dehydrogenase 0.52 HEPCGN_18555 yggT osmotic shock tolerance protein YggT low > 88
Escherichia coli ECRC62 0.72 BNILDI_14700 ugd UDP-glucose 6-dehydrogenase 0.52 BNILDI_09700 yggT osmotic shock tolerance protein YggT low > 75
Escherichia fergusonii Becca 0.72 EFB2_01827 UDP-glucose 6-dehydrogenase 0.52 EFB2_00950 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.72 ECOLIN_RS11985 UDP-glucose 6-dehydrogenase 0.52 ECOLIN_RS16420 osmotic shock tolerance protein YggT — —
Escherichia coli BW25113 0.72 b2028 ugd UDP-glucose 6-dehydrogenase (NCBI) 0.52 b2952 yggT predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC98 0.72 JDDGAC_28585 ugd UDP-glucose 6-dehydrogenase 0.52 JDDGAC_22880 yggT osmotic shock tolerance protein YggT low > 87
Escherichia coli ECOR27 0.72 NOLOHH_15790 ugd UDP-glucose 6-dehydrogenase 0.52 NOLOHH_11120 yggT osmotic shock tolerance protein YggT low > 76
Escherichia coli ECRC102 0.72 NIAGMN_22420 ugd UDP-glucose 6-dehydrogenase 0.52 NIAGMN_17015 yggT osmotic shock tolerance protein YggT low > 80
Escherichia coli ECRC101 0.72 MCAODC_20465 ugd UDP-glucose 6-dehydrogenase 0.52 MCAODC_09770 yggT osmotic shock tolerance protein YggT low > 87
Escherichia coli ECRC99 0.72 KEDOAH_03675 ugd UDP-glucose 6-dehydrogenase 0.52 KEDOAH_08890 yggT osmotic shock tolerance protein YggT — —
Escherichia coli ECRC100 0.72 OKFHMN_24475 ugd UDP-glucose 6-dehydrogenase 0.52 OKFHMN_19250 yggT osmotic shock tolerance protein YggT low > 79
Escherichia coli BL21 0.72 ECD_01930 UDP-glucose 6-dehydrogenase 0.52 ECD_02782 putative inner membrane protein; compensates for loss in K+ uptake — —
Alteromonas macleodii MIT1002 0.72 MIT1002_03556 UDP-glucose 6-dehydrogenase 0.56 MIT1002_03063 YGGT family protein — —
Castellaniella sp019104865 MT123 0.72 ABCV34_RS12915 nucleotide sugar dehydrogenase 0.30 ABCV34_RS10650 YggT family protein — —
Marinobacter adhaerens HP15 0.71 HP15_2385 UDP-glucose 6-dehydrogenase 0.31 HP15_286 protein of unknown function YGGT low > 73
Pectobacterium carotovorum WPP14 0.70 HER17_RS06515 nucleotide sugar dehydrogenase 0.61 HER17_RS03800 YggT family protein low > 75
Shewanella oneidensis MR-1 0.69 SO4687 ugd UDP-glucose 6-dehydrogenase (NCBI ptt file) 0.55 SO3355 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.68 OH686_14205 UDP-glucose 6-dehydrogenase 0.35 OH686_10985 YggT-like protein low > 80
Pseudomonas sp. DMC3 0.21 GFF963 UDP-glucose 6-dehydrogenase 0.30 GFF211 hypothetical protein — —
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_07930 UDP-glucose 6-dehydrogenase 0.20 OKGIIK_11140 YGGT family — —
Pseudomonas sp. SVBP6 0.21 COO64_RS21115 UDP-glucose/GDP-mannose dehydrogenase family protein 0.34 COO64_RS12990 YggT family protein low > 93
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS07210 UDP-glucose/GDP-mannose dehydrogenase family protein 0.17 ABZR86_RS10430 YggT family protein — —
Pseudomonas sp. RS175 0.21 PFR28_02768 UDP-glucose 6-dehydrogenase 0.31 PFR28_04244 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_01140 UDP-glucose 6-dehydrogenase 0.32 AO356_13415 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_5884 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.35 Pf1N1B4_2340 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) — —
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_125 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.32 Pf6N2E2_4599 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) low > 103
Dechlorosoma suillum PS 0.21 Dsui_1947 nucleotide sugar dehydrogenase 0.22 Dsui_0601 putative integral membrane protein — —
Pseudomonas sp. BP01 0.20 JOY50_RS24545 UDP-glucose/GDP-mannose dehydrogenase family protein 0.33 JOY50_RS20900 YggT family protein low > 84
Pseudomonas putida KT2440 0.20 PP_2926 UDP-glucose 6-dehydrogenase 0.33 PP_5096 putative factor involved in shape determination low > 96
Pseudomonas fluorescens SBW25 0.20 PFLU_RS17930 UDP-glucose/GDP-mannose dehydrogenase family protein 0.31 PFLU_RS28380 YggT family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS17930 UDP-glucose/GDP-mannose dehydrogenase family protein 0.31 PFLU_RS28380 YggT family protein low > 109
Variovorax sp. SCN45 0.19 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) 0.23 GFF3880 Cell division integral membrane protein, YggT and half-length relatives low > 127
Pantoea agglomerans CFBP13505 P0401 0.19 PagCFBP13505_RS02875 UDP-glucose/GDP-mannose dehydrogenase family protein 0.57 PagCFBP13505_RS16105 YggT family protein — —
Rahnella sp. WP5 0.19 EX31_RS10095 UDP-glucose/GDP-mannose dehydrogenase family protein 0.62 EX31_RS02695 YggT family protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF4731 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.18 GFF4919 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_5105 UDP-glucose 6-dehydrogenase 0.34 Psyr_0475 Protein of unknown function YGGT low > 86
Pantoea sp. MT58 0.19 IAI47_09035 UDP-glucose/GDP-mannose dehydrogenase family protein 0.57 IAI47_03590 YggT family protein — —
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_5105 UDP-glucose 6-dehydrogenase 0.34 Psyr_0475 Protein of unknown function YGGT low > 86
Erwinia amylovora T8 0.19 OLJFJH_13295 UDP-glucose 6-dehydrogenase 0.52 OLJFJH_08525 YGGT family — —
Ralstonia solanacearum PSI07 0.18 RPSI07_RS19665 UDP-glucose/GDP-mannose dehydrogenase family protein 0.26 RPSI07_RS06140 YggT family protein — —
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS13805 UDP-glucose/GDP-mannose dehydrogenase family protein 0.22 RALBFv3_RS17510 YggT family protein — —
Ralstonia solanacearum UW163 0.18 UW163_RS16005 UDP-glucose/GDP-mannose dehydrogenase family protein 0.22 UW163_RS21640 YggT family protein — —
Erwinia tracheiphila HP pepo 2.2 0.18 IJEDHG_22700 ugd UDP-glucose 6-dehydrogenase 0.57 IJEDHG_03455 YGGT family — —
Erwinia tracheiphila SCR3 0.18 LU632_RS12915 UDP-glucose/GDP-mannose dehydrogenase family protein 0.57 LU632_RS05455 YggT family protein — —
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS09495 UDP-glucose/GDP-mannose dehydrogenase family protein 0.28 ABZR87_RS18295 YggT family protein — —
Pseudomonas lactucae CFBP13502 0.18 GEMAOFIL_02974 UDP-glucose 6-dehydrogenase 0.33 GEMAOFIL_05484 hypothetical protein low > 96
Ralstonia solanacearum GMI1000 0.18 RS_RS04540 UDP-glucose/GDP-mannose dehydrogenase family protein 0.30 RS_RS23805 YggT family protein — —
Pseudomonas simiae WCS417 0.18 PS417_13820 UDP-glucose 6-dehydrogenase 0.32 PS417_26735 membrane protein — —
Acinetobacter baumannii LAC-4 0.12 RR41_RS18535 nucleotide sugar dehydrogenase 0.18 RR41_RS15920 YggT family protein low > 55

Not shown: 25 genomes with orthologs for CSW01_18075 only; 23 genomes with orthologs for CSW01_02445 only