Conservation of cofitness between CSW01_03170 and CSW01_01365 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03170 ATP-dependent helicase HrpB 1.0 CSW01_01365 MBL fold hydrolase 0.58 9
Shewanella oneidensis MR-1 0.39 SO0632 hrpB ATP-dependent helicase HrpB (NCBI ptt file) 0.27 SO0541 metallo-beta-lactamase family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_0622 ATP-dependent helicase HrpB (RefSeq) 0.26 Shewana3_0537 aspartate kinase (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_5038 ATP-dependent helicase HrpB 0.26 Pf6N2E2_1519 Metallo-beta-lactamase family protein, RNA-specific low > 103
Shewanella amazonensis SB2B 0.37 Sama_2972 ATP-dependent helicase HrpB (RefSeq) 0.27 Sama_0497 metallo-beta-lactamase family protein (RefSeq) low > 62
Marinobacter adhaerens HP15 0.37 HP15_3782 RNA helicase, ATP-dependent DEAH box, HrpB type 0.45 HP15_2380 metallo-beta-lactamase family protein low > 73
Pseudomonas aeruginosa PA14 0.36 IKLFDK_20430 ATP-dependent helicase HrpB 0.24 IKLFDK_18450 MBL fold metallo-hydrolase low > 100
Pseudomonas stutzeri RCH2 0.36 Psest_0629 ATP-dependent helicase HrpB 0.42 Psest_1808 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain 0.29 24
Pseudomonas sp. RS175 0.36 PFR28_03833 ATP-dependent RNA helicase HrpB 0.26 PFR28_02316 Ribonuclease low > 88
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_15485 ATP-dependent helicase 0.26 AO356_23925 mRNA 3'-end processing factor low > 104
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_06300 ATP-dependent helicase 0.28 AO353_19925 mRNA 3'-end processing factor low > 101
Pseudomonas sp. BP01 0.35 JOY50_RS21795 hrpB ATP-dependent helicase HrpB 0.39 JOY50_RS16110 MBL fold metallo-hydrolase RNA specificity domain-containing protein low > 84
Pseudomonas putida KT2440 0.35 PP_4772 ATP-dependent helicase HrpB 0.39 PP_1775 Metallo-beta-lactamase family protein low > 96
Shewanella loihica PV-4 0.35 Shew_3124 ATP-dependent helicase HrpB (RefSeq) 0.27 Shew_3327 RNA-metabolising metallo-beta-lactamase (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4320 ATP-dependent helicase HrpB 0.41 Psyr_3639 Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4320 ATP-dependent helicase HrpB 0.41 Psyr_3639 Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase low > 86
Sinorhizobium meliloti 1021 0.35 SMc02586 ATP-dependent helicase 0.23 SMa1131 Metallo-beta-lactamase superfamily protein low > 103
Rhodopseudomonas palustris CGA009 0.34 TX73_002770 ATP-dependent helicase HrpB 0.25 TX73_021505 MBL fold metallo-hydrolase low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_3452 ATP-dependent helicase HrpB 0.25 Echvi_0356 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain low > 79
Azospirillum sp. SherDot2 0.34 MPMX19_00095 ATP-dependent RNA helicase HrpB 0.28 MPMX19_05334 hypothetical protein low > 112
Caulobacter crescentus NA1000 0.33 CCNA_01243 ATP-dependent helicase hrpB 0.23 CCNA_00854 metallo-beta-lactamase protein low > 66
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01243 ATP-dependent helicase hrpB 0.23 CCNA_00854 metallo-beta-lactamase protein low > 67
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS13060 ATP-dependent helicase HrpB 0.25 ABZR86_RS04385 MBL fold metallo-hydrolase low > 74
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_16270 hrpA HrpA-like RNA helicase 0.25 OKGIIK_00845 ySH1 MBL fold metallo-hydrolase low > 52
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS10015 ATP-dependent helicase HrpB 0.26 LRK54_RS14170 MBL fold metallo-hydrolase low > 59
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU1543 hrpB ATP-dependent helicase HrpB (TIGR) 0.25 DVU1530 metallo-beta-lactamase family protein (TIGR) low > 55
Lysobacter sp. OAE881 0.32 ABIE51_RS00675 ATP-dependent helicase HrpB 0.28 ABIE51_RS06640 MBL fold metallo-hydrolase low > 62
Rhodanobacter denitrificans MT42 0.32 LRK55_RS09655 ATP-dependent helicase HrpB 0.26 LRK55_RS13890 MBL fold metallo-hydrolase low > 63
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_03600 ATP-dependent helicase HrpB 0.25 CA264_05985 MBL fold hydrolase low > 74
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0192 ATP-dependent helicase HrpB (RefSeq) 0.25 DvMF_0171 beta-lactamase domain protein (RefSeq) low > 51
Alteromonas macleodii MIT1002 0.28 MIT1002_00406 ATP-dependent RNA helicase HrpB 0.28 MIT1002_03270 Ribonuclease low > 70
Rhodanobacter sp000427505 FW510-R12 0.27 LRK53_RS02785 ATP-dependent helicase HrpB 0.27 LRK53_RS14440 MBL fold metallo-hydrolase low > 59

Not shown: 50 genomes with orthologs for CSW01_03170 only; 14 genomes with orthologs for CSW01_01365 only